Rhinopithecus roxellana (golden snub-nosed monkey): 104656549
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Entry
104656549 CDS
T03989
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
KO
K07603
collagen type XVII alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04382
Cornified envelope formation
rro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104656549 (COL17A1)
09158 Development and regeneration
04382 Cornified envelope formation
104656549 (COL17A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
DUF2868
Motif
Other DBs
NCBI-GeneID:
104656549
NCBI-ProteinID:
XP_010354518
UniProt:
A0A2K6PAW0
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Position
11:21366775..21422769
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AA seq
1445 aa
AA seq
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MDVTKKNKRDGTEVTERIVTETVTARLTSLPPKGGTSNGYAKTGSFGGGSRLEKQSLTHG
SSGYINSTGSTRGHASTSSYRRAHSPASTLPNSPGSTFERKTHVTRHAYEGSSSGNSSPE
YPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNSS
NTLPIPKKGTVETKIVTASSQSVSGTYDATILDANLPSHVWSSTLPAGSSMGTYHNNMTT
QSSSLLNTNAYSAGSVFGVPNNMASCSSTLHPGLSTSSSVFGMQNNLAPSSTTLSHGTTT
TSTAYGVKKNMPQSPVAVNTGVSTSTACTTSVQSDDLLHKDCKFLILEKDNTPAKKEMEL
LIMTKDSGKVFTASPASIAATSFSEDTLKKEKQAAYNADSGLKAEANGDLKTVSTKGKTT
TAGIHSYGSGGVGGSGGGGNVGGAGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRKLKARVDELERFRSSILSDEKLERSSKARLQGMAPTVGADLDKIGLN
SNNQEVLWMFVRNKLMTEQENGNLRGSPGPKGDMGSPGPKGDRGFPGTPGIPGPLGHPGP
EGPKGQKGSMGDPGMEGPMGQRGREGPMGPRGEPGPPGSGEKGERGAAGEPGPHGPPGVP
GSVGPKGSSGSPGPQGPPGPVGLQGLRGEVGLPGVKGDKGPMGPPGPKGDQGEKGPRGLT
GEPGMRGLPGAVGEPGAKGAMGPAGPDGHQGPRGEQGLTGMPGIRGPPGPSGDPGKPGLI
GPQGPQGLPGTPGRPGIKGEPGAPGKIVTSDGSSMLTVPGPPGPPGAMGPPGPPGAPGPA
GPAGLPGPQETFLSGPPGPPGPPGPKGDQGPPGPRGHQGEQGLPGFSTSGSSSFGLNLQG
PPGPPGPQGPKGDKGDPGVPGALGIPSGPSEGGSSSTTYVSGPPGPPGPPGPPGSLSSSG
REIQQYISEYMQSDSIRSYLSGVQGPPGPPGPPGPVTTITGETFNYSELANHVVSYLRTS
GYNIGLFSSSISSEDILAVLQRDDVRQYLRQYLMGPQGPPGPPGASGDGSLLSLDYAELS
SRILSYMSSSGISIGLPGPPGPPGLPGTSYEELLSLLRGSEFRGIVGPPGPPGPPGIPGN
VWSSISVEDLSSYLHTAGLSFIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELI
SYLTSPDVRSFIVGPPGPPGPQGPPGDSRLLSTDAFHSRGSSSSSHSSSVRRGSSYSSST
GTGAGTGSVGTGGAFGAATGDGGPYGTDTGPGRGYGAAAEGSMYGGNGGLFGADFAGGLD
YNELAVRVSESMQRQGLLQGMAYTVQGPPGQPGPQGPPGISKVFSAYSNVTADLMDFFRT
YGAIQGPPGQKGEMGTPGPKGDRGPAGPPGHRGPPGPRGHKGEKGDKGDQVYAGRRRRRS
IAVKP
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaccaagaaaaacaaacgagatggtactgaagtcactgaaagaattgtcact
gaaacagtaacagcaagacttacatccttaccaccaaaaggcgggaccagcaatggctat
gccaaaacaggctcttttggtggagggagccgattggagaaacaaagcctgactcatggc
agcagtggctacataaactcaactggaagcacacgaggccatgcctccacctctagttac
aggagggctcactcacctgcctccactctgcccaactccccaggctcaacctttgaaagg
aaaactcacgttacccgccatgcatatgaagggagttccagtggcaactcttctccggag
taccctcggaaggaatttgcatcttcctcaaccagaggacggagtcaaacacgagagagc
gaaattcgagttcgactgcagagtgcgtccccatccacacgatggacagaattggatgat
gttaagcgtttgctcaaagggagtcgatcggcaagtgtgagccccacccggaattcctcc
aacacactccccatccccaagaaaggcactgtggagaccaaaattgtgacggcgagctcc
cagtcggtgtcaggcacctacgatgcaacgatcctggatgccaaccttccctcccatgtg
tggtcctccaccctaccagcggggtcctccatggggacctatcacaacaacatgacaacc
cagagctcgtccctcctcaacaccaatgcctactctgcaggatcagtcttcggagttcca
aataacatggcatcctgctcatccactttgcaccctggactcagcacatcctcctcagta
tttggcatgcagaacaatttggcccccagctcgactaccctgtcccatggcactaccaca
acttccacagcatatggggtgaagaaaaacatgccccagagccctgtggctgtgaacacc
ggcgtttccacctctactgcctgcaccacaagtgtgcagagtgatgaccttttgcacaag
gactgcaagttcctgatcctagagaaagacaacacacctgccaagaaggagatggagctg
ctgatcatgaccaaggacagcgggaaggtctttacggcctcccccgccagcatcgctgct
acttctttttcagaagacaccctaaaaaaagaaaagcaagctgcctacaatgctgactca
ggcctaaaagctgaagctaatggagacctgaagactgtgtccacaaagggcaagaccacc
actgcaggtatccacagctacggcagcggtggtgttggtggcagtggaggaggtggcaat
gttggtggtgctggcggtggcccttggggagcggcgccagcctggtgcccctgcggctcc
tgctgcagctggtggaagtggctgctgggcctgctgctcacctggctgctcctcctgggg
ctgctcttcggcctcattgctctggccgaggaggtgaggaagctgaaggctcgtgtggac
gagctggagaggttcaggagcagcatcctgtctgacgagaaactggagagaagcagcaag
gcccgcctccagggcatggcacccacggtgggagcagacctggacaaaattgggctgaac
agcaacaaccaggaggtgctctggatgttcgtgaggaacaagctaatgacggaacaggaa
aatggaaatctccgaggaagccctggccctaaaggtgacatgggaagtccaggacctaaa
ggagatcgagggttccctgggactccaggtatccctgggcccttgggccacccaggtcca
gaaggaccaaaaggtcaaaaaggcagcatgggagatcctggcatggaaggccccatgggc
cagagagggcgagaaggccccatgggacctcgtggtgagccagggcctcctgggtctgga
gagaaaggggaaagaggggctgctggtgaaccaggtcctcacggcccacctggtgtccca
ggttctgtgggtcccaaaggttccagcggctctcctggcccacagggccctccaggtcct
gtaggtctccaaggactccgaggtgaagtgggacttcctggtgtcaaaggtgacaaagga
ccgatgggaccaccaggacccaaaggtgaccagggtgagaaaggacctcgaggtctcaca
ggcgagcctggcatgagaggtttgcctggtgctgttggtgagcccggggctaaaggagca
atgggtcctgctggcccagatggacaccaaggcccaagaggtgaacaaggtcttacaggg
atgcctggaatccgtggcccaccaggaccttctggagacccaggaaagccaggtctcata
ggaccccagggacctcagggacttcccggtacccctggccgaccaggaataaaaggtgaa
ccaggagctccaggcaagatcgtgacttcagacgggtcgtcaatgcttactgtcccaggc
cccccagggcctcccggagccatgggacccccaggacctccaggtgccccaggccctgcc
ggcccagctggtctcccaggaccgcaagaaaccttcctctctggccctccaggcccacct
ggccccccaggtcccaagggagatcaaggtcccccaggccccagaggacaccaaggcgag
caaggcctcccaggtttctcaacctcagggtccagttctttcggactcaaccttcaggga
ccaccaggcccacctggcccccagggacccaaaggtgacaaaggtgatccaggtgtccca
ggggctcttggcattcctagtggtccttctgaagggggatcatcaagcaccacgtatgtg
tcaggcccgccaggcccccctgggccccctgggcctccgggctctctcagcagctctggc
cgggagattcagcagtacatctctgagtacatgcagagtgacagtattaggtcttaccta
tccggagttcaaggtcccccaggcccacctggtcccccaggacctgtcaccaccatcaca
ggcgagactttcaactactcagagctggcaaaccacgttgtgagctacttacggacttcg
gggtacaacatcggcttgttctcgtcctccatctcttctgaagacatcctggctgtgctg
cagcgggatgacgtgcgtcagtacctacgtcagtacctgatgggccctcagggtccgcca
gggccaccaggagccagtggagacgggtccctcctgtctttggactatgcagagctgagt
agtcgcattctcagctacatgtcgagttctgggatcagcattgggcttcctggtcccccg
gggccccctggcttgccaggaacctcctatgaggagctcctctccttgctgcgagggtct
gaattcagaggcatcgttggacctccaggtcccccgggtccaccagggatcccaggcaat
gtgtggtccagcatcagcgtggaggacctctcgtcttacttacacactgcaggtttgtca
ttcatcccaggccctccaggacctcctggtcccccaggtcctcgagggcccccgggtgtc
tcaggagctctggcaacctatgcagctgaaaacagcgacagcttccggagcgagctgatc
agctacctcacaagtcctgatgtgcgcagcttcattgttggtcccccaggccctcctggg
ccgcagggaccccctggggacagccgcctcctgtccacggatgccttccacagtcggggt
agcagctcctcctcacacagctcgtctgtcaggcggggcagctcctacagctcttccacg
ggcacaggagctggcacaggctccgtgggtacagggggtgcctttggtgcagctacagga
gatgggggcccctatggcactgacaccggcccaggcagaggctatggggcagcagcagaa
ggcagcatgtatggtggcaatggcggactatttggggctgactttgctggaggtctggat
tacaatgagctggctgtgagagtatcagagagcatgcagcgtcagggcctactgcaaggg
atggcctacactgtccagggcccaccaggccagcctgggccgcagggaccacccggtatc
agcaaggtcttctctgcctacagcaacgtgactgcggacctcatggacttcttccgaact
tatggagccattcaaggaccccctgggcagaaaggagagatgggcactccaggacccaaa
ggtgacaggggccctgctgggccaccaggtcatcgtgggccacctggccctcgagggcac
aagggagaaaaaggagacaaaggtgaccaagtctatgctgggcggagaagaagaagaagt
attgctgtcaagccatga
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