Rhinopithecus roxellana (golden snub-nosed monkey): 104657017
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Entry
104657017 CDS
T03989
Symbol
SMARCA5
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 isoform X1
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104657017 (SMARCA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104657017 (SMARCA5)
03036 Chromosome and associated proteins [BR:
rro03036
]
104657017 (SMARCA5)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
104657017 (SMARCA5)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
104657017 (SMARCA5)
RSF complex
104657017 (SMARCA5)
WICH complex
104657017 (SMARCA5)
B-WICH complex
104657017 (SMARCA5)
NORC complex
104657017 (SMARCA5)
BRF complex
104657017 (SMARCA5)
NuRF complex (fruit fly)
104657017 (SMARCA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
Myb_DNA-binding
DBINO
AAA_14
Motif
Other DBs
NCBI-GeneID:
104657017
NCBI-ProteinID:
XP_010355031
LinkDB
All DBs
Position
2:80479053..80520387
Genome browser
AA seq
1053 aa
AA seq
DB search
MSSAAEPPPPPPPESAPSKPAASTASGGSNSSNKGGPEGVAAQAVASAASAGPAEAEMEQ
EVFDDASPGKQKEIQEPDPTYEEKMQTDRANRFEYLLKQTELFAHFIQPAAQKTPTSPLK
MKPGRPRIKKDEKQNLLSVGDYRHRRTEQEEDEELLTESSKATNVCTRFEDSPSYVKWGK
LRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPHMVLVPKS
TLHNWMSEFKRWVPTLRSVCLIGDKEQRAAFVRDVLLPGEWDVCVTSYEMLIKEKSVFKK
FNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVF
NSADDFDSWFDTNNCLGDQKLVERLHMVLRPFLLRRIKADVEKSLPPKKEVKIYVGLSKM
QREWYTRILMKDIDILNSAGKMDKMRLLNILMQLRKCCNHPYLFDGAEPGPPYTTDMHLV
TNSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQ
DSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQT
KTVRVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHGAT
HVFASKESEITDEDIDGILERGAKKTAEMNEKLSKMGESSLRNFTMDTESSVYNFEGEDY
REKQKIAFTEWIEPPKRERKANYAVDAYFREALRVSEPKAPKAPRPPKQPNVQDFQFFPP
RLFELLEKEILFYRKTIGYKVPRNPELPNAAQAQKEEQLKIDEAESLNDEELEEKEKLLT
QGFTNWNKRDFNQFIKANEKWGRDDIENIAREVEGKTPEEVIEYSAVFWERCNELQDIEK
IMAQIERGEARIQRRISIKKALDTKIGRYKAPFHQLRISYGTNKGKNYTEEEDRFLICML
HKLGFDKENVYDELRQCIRNSPQFRFDWFLKSRTAMELQRRCNTLITLIERENMELEEKE
KAEKKKRGPKPSTQKRKMDGAPDGRGRKKKLKL
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgcggccgagcctccgccacccccgcctcccgagagcgcgccttccaagccc
gcagcctcgaccgccagcggcgggagcaacagcagcaacaaaggcggccccgagggcgtc
gctgcgcaggcggttgcgtctgcggccagcgcgggtcccgcagaagccgagatggagcag
gaagtatttgatgatgcgtcacctggaaagcaaaaagaaatccaagaaccagatcctacc
tatgaagaaaaaatgcaaactgaccgggcaaatagattcgagtatttattaaagcagaca
gaactgtttgcacatttcattcaacctgctgctcagaagactccaacttcacctttgaag
atgaaaccagggcgcccacgaataaaaaaagatgagaagcagaacttactatcagttggc
gattaccgacaccgtagaacagagcaagaggaggatgaagaactattaacagaaagctcc
aaagcaaccaatgtttgcactcgatttgaagactctccatcatatgtaaaatggggtaaa
ctgagagattatcaggtccgaggattaaactggctcatttctttgtatgagaatggcatc
aatggtatccttgcagatgaaatgggtctaggaaagactcttcaaacaatttctcttctt
gggtacatgaaacattatagaaacattcctggtcctcatatggttttggttcctaagtct
acgttacacaactggatgagtgaattcaagagatgggtaccaacacttagatctgtttgt
ttgataggagataaagaacaaagagctgcttttgtcagagacgttttattaccaggagaa
tgggacgtatgtgtaacatcttatgaaatgcttattaaagagaagtctgtgttcaaaaaa
tttaattggagatacttagtaatagatgaagctcacaggatcaagaatgaaaaatctaag
ttgtcagaaatagtgagggaattcaagactacaaatagactattattgactggaacacct
cttcagaacaacttgcatgagctgtggtcacttcttaactttctgttgccagatgtgttt
aattcagcggatgactttgattcatggtttgatacgaacaactgccttggggaccaaaaa
ctagttgagaggcttcatatggttttgcgtccattcctgcttcgtcgaattaaggctgat
gttgaaaagagtttgcctccaaagaaggaagtaaaaatctatgtgggcctcagcaaaatg
caaagggaatggtatactcggatattaatgaaagatatagatatactcaattcagcaggc
aagatggacaaaatgaggttattgaacatcctgatgcagttgagaaagtgctgtaatcat
ccatatctctttgatggagcggaacctggtccaccttatacaacagatatgcatctagta
accaacagtggcaaaatggtggttttagacaagctgctccctaagttaaaagaacaaggt
tcacgagtattaatcttcagtcaaatgacaagggtattggacattttggaagattattgc
atgtggagaaattatgagtactgcaggttggatggtcagacgccccatgatgagagacaa
gactccatcaatgcatacaatgaaccaaacagcacaaagtttgttttcatgttaagcacg
cgtgctggtggtcttggcatcaatcttgcgactgctgatgtagtaattttgtatgattct
gattggaatccccaagtagatcttcaggctatggaccgagcacatagaattggacagacc
aagacagtcagggtgttccgctttataactgataacactgtagaagaaagaatagtagaa
cgtgctgagatgaaactcagactggattcaatagtcattcaacaagggaggctggtggat
cagaatctgaacaaaattgggaaagatgaaatgcttcaaatgattagacatggggcaaca
catgtgtttgcttcaaaggaaagtgagatcactgatgaagatattgatggtattttagaa
agaggtgcaaagaagactgcagagatgaatgaaaagctctccaagatgggcgaaagctca
cttagaaactttacaatggatacagagtcgagtgtttataacttcgaaggagaagactat
agagaaaaacaaaagattgcattcacagaatggattgaaccacctaaacgagaaagaaaa
gccaactatgccgtggatgcatatttcagggaagctcttcgtgttagtgaacctaaagcc
cccaaggctcctcgacctccaaaacaacccaatgttcaggatttccagttctttcctcca
cgtttatttgaattactggaaaaagaaattctgttttacagaaaaactattgggtacaag
gtacctcgaaatcctgagctgcctaatgcagcacaggcacaaaaagaagaacagctcaaa
attgatgaagctgaatcccttaatgatgaagagctagaggaaaaagagaagcttctaaca
cagggatttaccaattggaataagagagattttaatcagtttatcaaggctaatgagaag
tggggtcgtgatgatattgaaaatatagcaagagaagtagaaggcaaaactccagaagaa
gtcattgaatattcagctgtgttctgggaaaggtgcaatgagctccaggacatagagaag
attatggcccagattgaaaggggagaggcgagaattcaaagaagaataagcatcaagaaa
gcacttgacacaaagattggacggtacaaagcaccttttcatcagctgagaatatcatat
ggtactaacaaaggaaaaaactatactgaagaagaagatcgttttctgatttgtatgctt
cacaaacttggatttgacaaagaaaatgtttatgatgaattgcgacagtgtattcgcaac
tctcctcagttcagatttgactggtttcttaagtccagaactgcaatggagctccagagg
agatgtaataccttaattactttgattgaaagagaaaacatggaactagaagaaaaggag
aaggcagagaaaaagaaacgaggaccaaagccttcaacacagaaacgtaaaatggatgga
gcacctgacggtcgaggaagaaaaaagaagctgaaactatga
DBGET
integrated database retrieval system
