Rhinopithecus roxellana (golden snub-nosed monkey): 104658033
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Entry
104658033 CDS
T03989
Symbol
COL6A3
Name
(RefSeq) collagen alpha-3(VI) chain isoform X4
KO
K06238
collagen type VI alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
rro04974
Protein digestion and absorption
rro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104658033 (COL6A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104658033 (COL6A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104658033 (COL6A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104658033 (COL6A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104658033 (COL6A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
104658033 (COL6A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rro04147
]
104658033 (COL6A3)
00536 Glycosaminoglycan binding proteins [BR:
rro00536
]
104658033 (COL6A3)
Exosome [BR:
rro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104658033 (COL6A3)
Glycosaminoglycan binding proteins [BR:
rro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104658033 (COL6A3)
Hyaluronan
Extracellular matrix or blood plasma proteins
104658033 (COL6A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
Kunitz_BPTI
VWA_3
fn3
Extensin_1
VWA_4
Motif
Other DBs
NCBI-GeneID:
104658033
NCBI-ProteinID:
XP_010356228
LinkDB
All DBs
Position
14:61280157..61371901
Genome browser
AA seq
2768 aa
AA seq
DB search
MRKHRHLPLVAVFCLFLSGFPTTHAQQQQAVIEVNKRDIVFLVDGSSALGLANFNAIRDF
VAKVIQRLEIGQDLIQVAVAQYADTVRPEFYFNTHPTKREVITAVRKMKPLDGSALYTGS
ALDFVRNNLFTSSAGYRAAEGIPKLLVLITGGKSLDEISQPAQELKRSSIMAFAIGNKGA
DQAELEEIAFDSSLVFIPAEFRAAPLQGMLPGLLAPLRTLTGTPEVHANKRDIIFLLDGS
TNVGKTNFPYVRDFVMNLVNSLDVGNDNIRVGLVQFSDTPVTEFSLNTYQTKSDILGHLR
QLQLQGGSGLNTGSALSYVHANHFTEAGGSRIREHVPQLLLLLTAGQSEDSYLQAANALT
RAGILTFCVGASQASKAELEQIAFNPSLVYLMDDFSSLPALPQQLIQPLTTYVSGGVEEV
PLAQPESKRDILFLFDGSANLVGQFPVVRDFLYKIIDELDVKPEGTRIAVAQYSDDVKVE
SRFDEHQSKAEILNLVKRMKIKTGKALNLGYALDYAQRYIFVKSAGSRIEDGVLQFLVLL
VAGRSSDRVDGPASNLKQSGVVPFIFQAKNADPAELEQIVLSPAFILAAESLPKIGDLQP
QIVNLLKSVHNGAPAPVSGEKDVVFLLDGSEGVRSGFPLLKEFVQRVVESLEVGQDRVRV
AVVQYSDRTRPEFYLNSYMNQQDVINAVRQLTLLGGPIPNTGAALEFVLRNILVSSAGSR
ITEGVPQLLIVLTAERSGDDVRNPSVILKRGGAVPIGIGIGNADITEMQTISFIPDFAVA
IPTFRQLGTVQQVISDRVTQLTREELSRLQPVLQPLPSPGVGGKRDVVFLIDGSQSAGPE
FQHIRTLIERLVDYLDVGFDTTRVAVIQFSDDPKVEFLLNAHSSKDEVQNAVQRLRPKGG
RQINVGSALEYVSRNIFKRPLGSRIEEGVPQFLVLISSGKSDDEVDDPAVELKQFGVAPL
TIARNADQEELVKVSLSPEYVFSVSTFRELPSLEQKLLTPITTLTSEQIQQLLASTRYPP
PAVESDAADIVFLIDSSEGVRPDGFAHIRDFVSRIVRRLNIGPSKVRVGVVQFSNDVFPE
FYLKTYRSQAPVLDAIRRLRLRGGSPLNTGKALEFVARNLFVKSAGSRIEDGVPQHLVLV
LGGKSQDDVSRFAQVIRSSGIVSLGVGDRNIDRAELQTITNDPRLVFTVREFRELPNIEE
RIMNSFGPSAATPAPPGVDTPSPSRPEKKKADIVFLLDGSINFRRDSFQEVLRFVSEIVD
TVYEDGDSIQVGVVQYNSDPTDEFFLKDFSTKRQIIDAINKVVYKGGRHANTKVGLEHLR
VNHFVPEAGSRLDQRVPQIAFVITGGKSVEDAQDVSLALTQRGVKVFAVGVRNIDSEEVG
KIASNSATAFRVGNVQELSELSEQVLETLHDAMHETLCPGVTDVAKACNLDVILGFDGSR
DQNVFVAQKGLESKVDAILNRISQMHRVSCSGGRSPTVRVSVVANTPSGPVEAFDFDEYQ
PEMLEKFRNMRSQHPYVLTADTLKVYQNKFRQSSPDSVKVVIHFTDGADGDLADLHRASE
DLRQEGVRALILVGLERVANLERLMHLEFGRGFMYDRPLRLNLLDLDYELAEQLDNIAEK
ACCGVPCKCSGQRGDRGPIGSIGPKGIPGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGC
PGQRGIKGSRGFPGEKGEIGEIGLDGLDGEDGDKGLPGSSGEKGNPGRRGDKGPRGAKGE
RGDVGIRGDPGNPGQDSQQRGPKGEIGDLGPMGVPGRDGVPGGPGETGKNGGFGRRGPPG
AKGNKGGPGQPGFEGEQGTRGAQGPAGPAGPPGLIGEQGISGPRGSGGAAGAPGERGRTG
PLGRKGEPGEPGPKGGIGNRGPRGETGDDGRDGVGSEGRRGKKGERGFPGYPGPKGNPGE
PGLNGTPGPKGIRGRRGNSGPPGIVGQKGDPGYPGPAGPKGNRGDSIDQCALIQSIKDKC
PCCYGPLECPVFPTELAFALDTSEGVNQDTFSRMRDVVLSIVNDLTIAESNCPRGARVAV
VTYNNEVTTEIRFADSKRKSVLLDKIKNLQVALTSKQQSLETAMSFVARNTFKRVRNGFL
MRKVAVFFSNRPTRASPQLREAVLKLSDAGITPLFLTSQEDRQLVNALQINNTAVGHALV
LPAGRDLTDFLENVRMCHVCLDICNIDPSCGFGSWRPSFRDRRAAGSDVDIDMAFILDSA
ETTTLFQFNEMKKYIAYLVRQLDMSPDPKASQHFARVAVVQHAPYESMGNASMSPVKVEF
SLTDYGSKEKLVDFLSRGMTQLQGTRALGSAIEYTIENVFESAPNPRDLKIVVLMLTGEV
QEQQLEEAQRVILQAKCKGYFFVVLGIGRKVNIKEVYTFASEPNDVFFKLVDKSTELNEE
PLMRFGRLLPSFISSENAFYLSPDIRKQCDWFQGDQPTKNLVKFGHKQVNVPNNVTSSPT
SNPVTTTKPVTTAKAVTTTTKPVTIVNQPSVKPAAAKPAPAKPAPAKPVAAKPVATKTAT
VRPPVVVKPATAAKPVAAKPAAVRPPAAAAAKPVVTKPEAPKPQAAKPAATKPATTKPVV
KVSREVQVSEITENSARLHWERPEPPSPYFYDLTITSAHDQSLILKQNLTVTDRVIGGLL
AGQMYHVSVVCYLRSQVRATYHGSFSTKKSQPPPPQPARSASSSTINLMVSTEPLALTET
DICKLPKDEGTCRDFILKWYYDPNTKSCARFWYGGCGGNENKFGSQTECEKVCAPVLAKP
GVINAMGT
NT seq
8307 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaacatcggcacttgcccttagtggccgtcttttgcctctttctctcaggcttt
cccacaactcatgcccagcagcagcaagcagtcattgaagtcaacaagagagacatagtc
ttcctggtggatggctcatctgcactgggactggccaacttcaatgccatccgagacttc
gttgctaaagtcatccagaggctggaaattggacaggatcttatccaggtggcagtggcc
cagtatgcagacactgtgaggcccgaattttatttcaatacccatcccacaaaaagggaa
gtcataaccgctgtacggaaaatgaagcccctggacggctcggccctgtacacgggctcc
gctctagactttgttcggaacaacctgttcacgagttcagccggctaccgtgctgccgag
gggattcctaagcttttggtgctgattacaggtggtaagtccctagatgaaatcagccag
cccgcccaggagctgaagagaagcagcataatggcctttgccatcgggaacaagggcgcc
gatcaggctgagctggaagagattgctttcgactcctccctggtgttcatcccagccgag
ttccgtgccgccccattgcaaggcatgctgcctggcttgctggcacctctcaggaccctc
actggaacccctgaagttcacgcaaacaaaagggatatcatcttccttttggatggatca
accaacgttggaaaaaccaatttcccttatgtgcgcgactttgtaatgaacctagttaac
agccttgatgttggaaatgacaatattcgtgttggtttagtgcaatttagtgacactcct
gtaacggagttctctttaaacacataccagaccaagtcagatatccttggtcacctgagg
cagctgcagctccagggaggttctggtctgaacacaggctcagccctaagctatgtccat
gccaaccatttcacggaagctggcggcagcaggatccgtgaacacgtgccgcagctcctg
cttctgctcacagctgggcagtctgaggactcctatttgcaagctgccaacgccttgaca
cgcgcgggcatcctgaccttttgtgtgggagctagccaggcgagtaaggcagagcttgag
cagattgcttttaacccaagcctggtgtatctcatggatgatttcagctccctgccagct
ttgcctcagcagctgattcagcccctaaccacatatgttagtggaggtgtggaggaagta
ccactcgcccagccagagagcaagcgagacattctgttcctctttgatggctcagccaat
cttgtgggccagttccctgttgtccgtgactttctctacaagattatcgatgagcttgat
gtgaagccagaagggacccgaattgcggtggctcagtacagtgatgatgtcaaggtggag
tcccgtttcgatgagcatcagagtaaggctgagatcctgaatctcgtgaagagaatgaag
atcaagacaggcaaagccctcaacctgggctacgctctggactatgcacagaggtacatt
tttgtgaagtctgctggcagccggatcgaggatggagtgcttcagttcctggtgctgctg
gttgcgggaaggtcatctgaccgtgtggatgggccagcaagtaacctgaagcagagtggg
gtcgtgcctttcatcttccaagccaagaatgcggaccctgctgagttagagcagattgtg
ctgtctccagcgtttatcctggctgcggagtcgcttcccaagattggagatcttcaacca
cagatcgtgaatctcttaaaatcagtgcacaatggagcgccagcaccagtttcaggcgaa
aaggatgtggtgtttctgcttgatggctctgagggcgtcaggagcggcttccctctgttg
aaagagttcgtccagagagtggtggagagcctggaagtgggccaggaccgggtccgcgtg
gccgtggtgcagtacagcgaccggaccaggcccgagttctacctgaattcatacatgaac
cagcaggacgtcatcaacgccgtccgccagctgaccctgctgggagggccgatccccaac
accggggctgccctggagtttgtcctgaggaacatcctggtcagctctgcgggaagcagg
ataacagaaggcgtgccccagctgctgatcgtcctcacagccgaaaggtctggggatgat
gtgcggaacccctccgtgatcctgaagaggggcggggctgtgcccatcggcattggcatc
gggaacgctgacatcacagagatgcagaccatctccttcatcccggactttgccgtggcc
attcccacctttcgccagctggggaccgtccaacaggtcatctctgacagggtgacgcag
ctcacccgcgaggagctgagcaggctgcagccggtgttgcagcctctgccgagcccaggt
gttggcggcaagagggacgtggtctttctcatcgatggttcccaaagtgccgggcctgag
ttccagcacattcgcaccctcatagagaggctggttgactacctggatgtgggctttgac
accacccgggtggccgtcatccagttcagcgatgaccccaaggtggagttcctgctgaac
gcccattccagcaaggacgaagtgcagaacgcggtgcagcggctgaggcccaagggaggg
cggcagatcaacgtgggcagtgccctggagtatgtgtccaggaacatcttcaagaggccc
ctggggagccgcatcgaagagggcgtcccacagttcctggtcctcatctcgtctggaaag
tctgacgatgaggtggatgacccggcggtggaactcaagcagtttggcgtggcccctttg
acgattgccagaaacgcagaccaggaggagctggtgaaggtctcactgagccccgaatat
gtgttctcggtgagcaccttcagggagctgcctagcttggagcagaaactgctgacaccc
atcacgaccctgacctcagagcagatccagcagctcctagccagcactcgctatccgcct
ccagcagttgagagtgatgctgcagacatcgtctttctgatcgacagctctgagggtgtt
aggccagacggctttgcacatattcgagactttgttagcaggattgttcgaagactcaac
attggccccagtaaagtgagagttggggttgtacagttcagcaatgatgtcttcccagaa
ttctacctgaagacctacagatcccaggccccggtgctggacgccatacggcgcctgagg
ctcagaggggggtccccactgaacactggcaaggctctcgaatttgtggcaagaaacctc
tttgttaagtctgcggggagtcgcatagaagacggggtgccccaacacttggtcctggtc
ctgggtggaaaatcccaggatgacgtgtccaggtttgcccaggtgatccgttcctcgggg
attgtgagtttaggagtaggagaccggaacatcgacagagcagagctgcagaccatcacc
aatgaccccagactggtcttcacagtgcgagagttcagagagcttcccaacatagaagaa
agaatcatgaactcatttggaccctctgcggccacgcctgcacctccaggggttgacacc
ccttctccttcacggccagagaagaagaaagcagacattgtattcctgttggatggttcc
atcaacttcagaagggacagtttccaggaagtgcttcgttttgtgtctgaaatcgtggac
acagtttatgaagatggtgactctatccaagtgggggtggtccagtacaactctgacccc
actgatgaattcttcctgaaggacttctccaccaagaggcagattatcgatgccatcaac
aaagtggtctacaaagggggaagacatgccaacaccaaggtgggccttgagcacctgcgg
gtgaaccatttcgtgcctgaggcaggcagccgcctggaccagcgggtccctcagattgcc
tttgtgatcacgggaggaaagtcggtggaagatgcacaggatgtgagcctggccctcacc
cagaggggggtcaaagtgtttgcagttggagtgaggaatatcgactcggaggaggtcgga
aagatagcatccaacagcgccacggcattccgtgtgggcaatgtccaggagctgtccgaa
ctgagcgagcaagttttagaaactttgcatgatgcgatgcacgaaaccctgtgccctggt
gtgactgacgttgccaaagcttgtaatctggatgtgattctggggtttgacggttctaga
gaccagaatgtatttgtggcccagaagggcttagagtccaaggtggacgccatcttgaac
agaatcagccagatgcacagggtcagctgcagcggcggccgctcgcccaccgtgcgtgtg
tcagtggtggccaacacgccctcgggcccggtggaggccttcgactttgacgagtaccag
ccagagatgctcgagaagttccggaacatgcgtagccagcacccctatgtcctcacagca
gacacgctgaaagtctatcagaacaagttcagacagtcctcgccggacagtgtgaaggtg
gtcattcattttactgatggagcagatggagatctggctgatttacacagagcatctgag
gacctccgccaagaaggtgtccgcgctttgatcctggtgggccttgaacgagtggccaac
ttggagcggctaatgcatctggagtttgggcgagggttcatgtatgacaggcccctgagg
cttaacttgctggacttggattatgaactagcggagcaacttgacaacattgccgagaaa
gcttgctgtggggttccctgcaagtgctctgggcagaggggagaccgcgggcccatcggc
agcatcgggccaaagggtattcctggagaagacggctaccgaggctatcctggtgatgag
ggcggacccggtgagcgaggtccacctggtgtgaacggcactcaaggtttccagggctgc
ccgggccagagaggaataaagggctctcggggattcccaggagagaagggcgaaatagga
gaaattggactggatggtctagacggtgaagatggagacaaaggattgcctggttcttct
ggagagaaaggaaatcctggaagaaggggtgataaaggacctcgaggagcgaaaggagaa
agaggagacgttgggattcgaggggacccgggtaacccaggacaagacagccagcagaga
ggacccaaaggagaaatcggcgacctcggcccgatgggtgtcccagggagagacggagta
cctggaggacctggagaaactgggaagaatggtggctttggccgaaggggaccccccgga
gctaagggcaacaagggcggtcctggccagccgggctttgagggagagcaggggaccaga
ggtgcacagggcccagctggtcctgctggtcctccagggctgataggagaacaaggcatt
tctggacctcggggaagcggaggtgccgcaggtgctcctggagaacgaggcagaaccggt
cccctgggaagaaagggtgagcccggagagccaggaccaaaaggaggaatcggaaaccgg
ggccctcgtggggagacgggagatgacgggagagacggagttggcagtgaaggacgcaga
ggcaaaaaaggagaaagaggattccctggctacccaggaccaaagggtaacccgggcgag
cctgggctaaatggaacaccaggacccaaaggcatcagaggccgaaggggaaattcggga
cctccagggatagttggacagaagggagaccctggctacccaggaccagctggtcccaag
ggcaacagaggtgactccatcgatcaatgtgccctcatccaaagcatcaaagataaatgt
ccttgctgctatgggcccctggagtgccccgtcttcccgacagaactagcctttgcttta
gacacctctgagggggtcaaccaggacacattcagccggatgcgagatgtggtcttgagt
attgtgaatgacctgaccattgctgagagcaactgcccacggggggcccgggtggccgtg
gtcacctacaacaacgaggtgaccacagagatccggtttgctgactccaagaggaagtcg
gtcctcctggacaagattaagaaccttcaggtggctctgacatccaaacagcagagtctg
gagaccgccatgtcatttgtggccagaaacacatttaagcgtgtgcggaatggattccta
atgaggaaagtggctgttttcttcagcaacaggcccacaagagcatccccacagctcaga
gaggctgtgctcaagctctcagatgcggggatcacccccttgttccttacgagccaggaa
gaccggcagcttgtcaacgctttgcagatcaataacacagcagtgggacatgcgcttgtc
ctgcctgcggggagagacctcacagacttcctggagaatgtccgcatgtgtcacgtttgc
ttggacatctgcaacattgacccatcctgtggatttggcagttggaggccttccttcagg
gacaggagagcggcagggagcgatgtggacatcgacatggctttcatcttagacagcgct
gagaccaccaccctgttccagttcaatgagatgaagaagtacatagcatacctggtcaga
caactggacatgagcccagaccccaaggcctcccagcacttcgccagggtggctgttgtg
cagcatgcgccctatgagtccatgggcaatgccagcatgtcgcctgtgaaggtggaattc
tccctgactgactatggctccaaggagaagctggtggacttcctcagcaggggaatgaca
cagttgcagggaaccagggccttgggcagtgccattgaatataccatagagaatgtcttt
gaaagtgctccaaacccacgggacctgaaaattgtggttctgatgctgacgggcgaggtg
caggagcagcaactggaggaggcccagagagtcatcctgcaggccaaatgcaagggctac
ttcttcgtggtcctgggcattggcaggaaggtgaacatcaaggaggtatacaccttcgcc
agtgaaccaaacgacgtcttcttcaaattagtggacaagtccaccgagcttaatgaggag
cctttgatgcgctttgggaggctgttgccatccttcatcagcagtgaaaatgctttttac
ttgtccccagatatcaggaaacagtgtgattggttccaaggggaccaacccacaaagaat
cttgtgaagtttggtcacaaacaagtaaatgttccaaataatgttacttcaagtcctaca
tccaacccagtgacgaccacaaagccagtgactacagcgaaagcagtgaccaccacaaca
aagcctgtaactattgtaaatcagccatctgtgaagccagctgctgcaaagccggcccct
gcgaaaccagcccctgcaaaacctgtggctgccaagcctgtggccacaaagacggccact
gttagacccccagtggtggtgaagccagcaacagcagcgaagcctgtagcagcaaagcca
gcagctgtaagaccccccgctgctgctgccgcaaaaccagtggtgaccaagcctgaggcc
cctaagccacaggcagccaaaccagctgccaccaagccagccaccactaagcccgtggtt
aaggtgtcccgagaagtccaggtgtctgagatcacagagaacagcgctagactccactgg
gagaggcctgagccccccagtccttatttttatgacctcaccatcacctcagcccatgat
cagtccctgattctgaagcagaacctcacagtcacggaccgcgtcattggaggcctgctc
gctgggcagatgtaccatgtgtccgtggtctgctacctgaggtctcaggtcagagccacc
taccatggaagtttcagtacaaagaaatctcagcccccacctccacagccagcaaggtca
gcttctagttcaaccatcaatctaatggtgagcacagaaccgttggctctcactgaaaca
gatatatgcaagttgccaaaagacgaaggaacttgcagggatttcatattaaaatggtac
tatgatccaaacaccaaaagctgtgcaagattctggtatggaggttgtggcggaaacgaa
aacaaatttggatcacagacagaatgtgaaaaggtttgcgctcctgtgcttgccaaacct
ggagtcatcaatgcgatgggaacctaa
DBGET
integrated database retrieval system
