Rhinopithecus roxellana (golden snub-nosed monkey): 104658387
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Entry
104658387 CDS
T03989
Symbol
IGHMBP2
Name
(RefSeq) DNA-binding protein SMUBP-2 isoform X1
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rro03009
]
104658387 (IGHMBP2)
03012 Translation factors [BR:
rro03012
]
104658387 (IGHMBP2)
Enzymes [BR:
rro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104658387 (IGHMBP2)
5.6.2.5 RNA 5'-3' helicase
104658387 (IGHMBP2)
Ribosome biogenesis [BR:
rro03009
]
Eukaryotic type
Other ribosome biogenesis factors
104658387 (IGHMBP2)
Translation factors [BR:
rro03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
104658387 (IGHMBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
SMUBP-2_HCS1_1B
R3H
AAA_30
AAA_19
ResIII
zf-AN1
Viral_helicase1
DEAD
nSTAND3
AAA_16
SLFN-g3_helicase
Helicase_RecD
AAA_22
IstB_IS21
UvrD-helicase
PhoH
Flavi_DEAD
AAA_25
Zot
DnaB_C
ABC_tran
AAA
NPHP3_N
NTPase_1
UvrD_C_2
DAP3
ATPase
Ada3
Motif
Other DBs
NCBI-GeneID:
104658387
NCBI-ProteinID:
XP_010356732
UniProt:
A0A2K6RWU7
LinkDB
All DBs
Position
15:complement(5389434..5425534)
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AA seq
986 aa
AA seq
DB search
MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLY
GRLLVTFEPRRCGSVAALPSNSFTSGDIVGLYDAANEGSQLATGILTRVTQKSVTVAFDE
SHDFQLSLDRENSYRLLKLANDVTYRRLKKALVALKKYHSGPASSLIEVLFGRSAPSPAS
EIHPLTFFNTCLDASQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLC
CAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQQHCLDAVVARSDSAQIVADIRKDI
DQVFVKNKKTQDKREKSNFRNEVKLLRKELKGREEAAILESLTSANVVLATNTGASADGP
LKLLPENHFDVVVIDECAQALEASCWIPLLKARKCILAGDHKQLPPTIVSHKAALAGLSL
SLMERLAEEYGARAVRTLTVQYRMHQAIMRWASDTMYLGQLTAHPSVAGHLLRDLPGVAA
TEETGVPLLLVDTAGCGLFELEEEDEQSKGNPGEVRLVSLHIQALVDAGVPARDIAVVSP
YNFQVDLLRQSLAHKHPELEIKSVDGFQGREKEAVILSFVRSNRKGEVGFLAEDRRINVA
VTRARRHVAVICDSRTVNNHAFLKTLVEYFTRHGEVRTAFEYLDDIVPENYSHESSQGPS
HAATKPQGPATSTRTGSQRQEGGRESAAAARQGRKKPAGKSLAAEAPSQPSLNGGNLEGV
ESQDGVDHFRAMIAEFMASDKTQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFI
TVSKRAPPAPRPPAAPGPPAGTGGPAPLQPVPPSPARTEQPPREQRGPDQPDLRLQRVRS
AQGQPASKGQQKLPEKKKKKESKGHPAIDLPTEEDFEALVSAAIKADNTCGFTKCTASVT
ALGQFCQLCSRRYCLSHHLPEIHGCGERARAHARQRISREGILYAGSGTKDRSLDPAKRA
QLQRRLDKKLSELSNQRTSRRKERGT
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggcctcggcggctgtggagagcttcgtgaccaagcagctggacctgctggagctcgaa
agagacgcggaggtggaggagcgcaggtcctggcaggagaacatctctctgaaagagctc
cagagccgaggcgtgtgtttgctgaagctacaggtatccagccagcgcactgggctgtat
ggacggctgctggtcacctttgagcccaggcgatgcgggtctgtggcagctcttcccagt
aacagctttacttctggtgatatagtgggtctgtacgatgctgctaatgagggcagtcag
ctggccaccgggatcctgacccgggtcacccagaagtcggtcacggtggcctttgatgag
tcccacgatttccagttgagcttggaccgagagaattcctacagactgttgaaacttgcc
aatgatgtcacttacaggcgactgaaaaaagccctggttgctttaaagaagtatcattct
ggcccagcctcctcactcatagaagtgctctttggcagatctgctcccagtcctgccagt
gaaatacacccgctgacattcttcaacacctgcttggatgcctcccagaaagaagcggtt
tcatttgcgctgtcgcagaaagaacttgccatcatccacggacctcctggcactgggaaa
accacgactgtggttgagataattcttcaagctgtgaaacaaggcttaaaggttctgtgc
tgcgccccctccaacatcgccgtggacaatctggtggagcgcctagctctgtgtaagcag
cggatcctgcgcctggggcaccccgcccgcctcctggagtccattcagcagcactgcctg
gatgcggttgtagcacggagcgacagcgcccagattgttgctgacatcaggaaggacatc
gaccaggtctttgtgaaaaacaaaaagacccaggataagagagaaaaaagtaattttcga
aatgaagttaagctgttaagaaaagaactgaaggggagggaagaagcagctatactcgag
agcctcacttcggcaaacgtggtccttgcaacaaacacaggtgcgtctgccgacggcccc
ctgaagttgctgcccgagaaccacttcgacgtggtggtcattgacgagtgtgcccaggcc
cttgaggcgagctgctggatccccctgctgaaggccagaaagtgcatcctggcaggcgat
cacaagcaactgccccccaccatagtctctcacaaggctgcgctggctggactgtcactc
agcctgatggagcgcctggccgaggagtatggcgcgagggcggtgcggacgctgacggtg
cagtaccgcatgcaccaggccatcatgcgctgggcctctgacaccatgtacctcgggcag
ctcacggcccacccttctgtggcggggcacctgctgagggaccttccaggcgtggctgcc
acagaagagacaggtgtgcccctgctcctggtggacaccgccggctgcgggctgtttgag
ctggaggaagaggacgaacagtcgaaagggaaccctggcgaagtccgcctcgtcagtttg
cacatccaggctctggtggacgctggtgttccagcccgtgacattgccgtggtctcacca
tacaacttccaggtggacctgctcagacagagcctcgcgcacaagcaccccgagcttgaa
atcaagtccgtcgatggcttccaaggccgagagaaggaggccgtgatactgtccttcgtc
aggtccaacaggaaaggtgaagttggttttcttgctgaggaccggaggatcaatgtggcc
gtcacccgcgcccggcgccatgtggcggtcatctgtgactcccgtactgtcaacaatcat
gcatttttgaagaccctggtggagtatttcacacggcatggggaagtacgcacagccttt
gagtatcttgatgatattgtcccagaaaactattcccatgagagctcccagggtcccagc
catgctgccacaaagccccagggccctgctacgtccaccaggactggaagccagcggcag
gagggaggccgggagtctgcagcagctgccagacagggccggaagaagccggccggaaag
tctctggccgctgaagccccatctcagcccagcctcaacggaggcaacctggagggagtg
gagagccaagacggcgtggaccacttccgggccatgatcgcggagttcatggccagtgat
aagacgcagttggagtttccaccttccctcaattcccacgacaggctgcgggtccaccaa
atagccgaggagcacgggctgaggcacgacagttccggggaagggaagaggaggttcatc
accgtgagcaagagggccccgccggccccgcgacccccagcagccccgggacccccagca
gggaccggtggcccagcccctctccagccagtgccccctagccctgcgcggacggagcag
cctcccagagagcagcgtggcccagaccagcctgatctgagactgcagagggtcaggagt
gcgcaggggcagcccgccagcaaggggcagcagaaacttccagaaaagaaaaagaaaaaa
gaaagcaaaggacatccggccatagatctgcccacggaggaggactttgaggccctggtt
tctgctgccattaaggctgataacacctgtggctttaccaagtgcacagccagcgtcaca
gccctgggccagttctgccagctctgcagccgccgctactgcctcagccaccacctgccc
gagatccatggctgtggtgagagggctcgcgcccatgcccggcagagaatcagccgggaa
gggatcctctatgctggcagcgggaccaaggacagatccctggacccagccaagagggcc
cagctgcagaggaggctggataagaagctgagcgagctcagcaaccagaggaccagccgg
aggaaggagagggggacgtga
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