Rhinopithecus roxellana (golden snub-nosed monkey): 104658770
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Entry
104658770 CDS
T03989
Symbol
CIC
Name
(RefSeq) protein capicua homolog isoform X6
KO
K20225
capicua transcriptional repressor
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
104658770 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rro03000
]
104658770 (CIC)
Transcription factors [BR:
rro03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104658770 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
104658770
NCBI-ProteinID:
XP_010357180
LinkDB
All DBs
Position
12:complement(130074232..130101374)
Genome browser
AA seq
1607 aa
AA seq
DB search
MYSAHRPLMPASTAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHERPPGGTGSADPGRPPGATCPESPGPGPPHPLGVVEPG
KGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDAKVPGSSSCGAERLHAVGGPGSARPRAFSHSGV
HSLDGGEVDSQALQELTQMVSGPASYSGPKPSTQYGTPGPFAAPSEGGALAATGRPSLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFGTTDIDLKCKERVTDSESGDSS
GEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPVAFGKGYGSTPSSSASSPA
SSSASAATSFSLGSGTFKAQESGQGSTAGPLRPPLPGAGGPATPSKATRFLPTDPATFRR
KRPESVGGLEPPGPSVIAAPPSGGGSILQTLVLPPNKEEQEGGGARVPSAPAPSLAYGAP
AAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTEMGTGSRVPGG
SPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGYGAPAPPAVQF
IAQGAPGGGTTAGSGAGAGSGPNGPVPLGILQPGALGKAGGITQVQYILPTLPQQLQVAP
APAPAPGTKAATPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSAPPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPP
SKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSAGGHTLPLGTS
PASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQVGVSPVPSPQL
PPACAAPGGPVITAFYSGSPAPTSSAPLAQPSQAPPSLVYTVATSTTPPAATILPKGPAA
PATATPAPTSPFPSATGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPG
PAPRQPLEPGPVREPTAPESELEGQPTPPAPPPAPETWTPTARSSPPLPPPAEERTSAKG
PETMASKFPSSSSDWRVPGQGLENRGEPPTPPSPAPAPAVAPGGSSESSSGRAAGDTPER
KEAAGTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSLAT
SPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTFDR
TGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYADIF
PSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPVPPPTGTAAAPAPTPSPAGGPDPTS
PSSDSGTVQAAPPLPPPPESGPGQPGWEGAPQSSPPPPGPSTAATGR
NT seq
4824 nt
NT seq
+upstream
nt +downstream
nt
atgtattcggcccacaggcccctgatgcccgcgtccaccgcggcctcccgtggcctcggc
atgttcgtgtggacgaatgtggaacctcgctctgtggctgtgttcccctggcactcctta
gtccccttcctggcacccagccagcctgacccctccgtgcagccgagcgaggcccagcaa
cctgccagtcacccagtggcctccaaccagagcaaagaacctgctgagtcggcagctgtt
gctcatgaaaggccaccaggtgggacagggagtgctgaccctgggcggccccctggagcc
acatgccctgagagcccaggacccggacccccacaccctttgggggtggtggaacctggt
aagggtccgcctcccaccacagaggaggaggcccctggccccccaggagagccccgactg
gacagtgagacagagagtgaccatgatgatgccttcctctccatcatgtctcctgagatc
cagttgcctctaccgcctggaaaacgtcggacccagtccctcagtgccctacccaaggaa
cgggactcatcttctgagaaggatggacgcagccccaacaagcgggagaaggaccacatc
cggcggcccatgaatgccttcatgatcttcagcaagcggcaccgggccctggtccaccag
cgtcatcccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtacgcc
ttggggcccaaggagaagcagaagtaccacgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagattggaagtggtgcaacaaggaccgaaagaagtccagctcggag
gccaagcccacgagcctggggctggcaggagggcacaaggagacgcgggagcggagcatg
tcggagacgggcactgccgctgcccctggggtgtcctctgagctcctgtccgtcgcagcc
cagacactcctgagctcggacgccaaggttccggggagcagctcctgtggggcagaacgg
ctacacgcagttgggggacctggctcagctcggccccgagctttctctcacagtggggta
cacagcctggatggcggcgaagtagacagtcaggcactacaggaactgacgcagatggtg
tctggccctgcatcatactctggcccaaagccttctacccagtatggaactccaggtccc
tttgcagcccccagtgagggaggtgccttggcggccaccgggcggccttcgctgctgccc
acccgagcttctcgttctcagcgtgcggccagtgaggacatgacgagtgatgaggagcgc
atggtcatctgtgaggaggaaggggatgatgatgtcattgctgatgatggcttcggcacc
actgacattgatctcaagtgcaaggagcgggtgaccgacagcgagagtggggacagctct
ggggaggacccagagggcaacaagggctttggtcggaaggtgttttcacctgtgatccgt
tcttcctttacccactgccgtcccccactggaccctgagcccccagggcccccagatcct
cctgtagcctttggcaaaggctatggttccaccccatcctcctctgcgtcctcgcctgct
tcctcctcagcctcggcagccacctccttctcactgggctcaggaactttcaaggcccag
gagtctggtcagggcagcacagcgggccccctacggcccccactccctggggctgggggt
ccagcgacaccttccaaggcgacccggttcctcccaacggatcctgccaccttccggcgc
aaaagacctgaaagtgtgggtggcctggagccgccaggcccctcagtcatcgcggcccct
cccagcggaggaggaagcattctgcagacactggtgctgcccccaaacaaggaggagcaa
gagggtggcggagccagagtgccctccgcccccgccccatcactggcctacggggcccca
gcagctcccctgtcccgtcctgccgccaccatggtcaccaacgtggtgcggcctgtcagc
agcactcctgtgcccatcgcctctaagcccttccccacctctggccgggctgaggcgtct
ccaaatgacacagcaggtgccaggactgaaatgggcactgggtctcgggtgcctgggggc
tccccgctgggtgtcagcttagtgtattcggacaagaagtcggcagcagccacctcacca
gccccacacttggtggctggacccctgctgggcactgtgggaaaggcacctgccactgtc
actaacctactggtgggcaccccggggtatggggcccctgcgccccctgctgtccagttc
attgcccagggggcccctggcggtgggaccactgcgggctcaggagcaggtgctgggagt
ggcccgaatgggccagtacccctgggcatcctgcaaccaggtgccctgggcaaggctggg
ggaatcacccaggtacagtacatcctgcccacgctgccccagcagcttcaggtggcacct
gccccagcaccagcccctgggaccaaggcagcgactcccagtggccctgcacccaccacc
agcatccgtttcaccctcccaccgggcacttccaccaacggcaaagtcttggccgccact
gcacccactcctggcatccccatcctgcagtctgtaccctccgccccaccccccaaagcc
cagtcagtttctcccgtgcaggccccgcccccaggtggttcagcccaactgctgcctggg
aaggtcctagtgcccctggccgcccctagcatgtcagtgcgcggtggaggggccggccag
ccgctgccactggtgagcccacccttctcagtacctgtgcagaatggtgcccagcccccc
agcaagatcatccagctgaccccagtgcctgtgagcacacccagcggcctggtgccgccc
ctgagcccagccacactccctggacccacttctcagcctcagaaggtcctgctgccctcc
tccaccagaatcacctatgtgcagtcagcgggcgggcacacgctgcccctgggtaccagc
cctgcgtccagccaggctggaacagtcacctcgtacgggcccacgagctctgtagctcta
ggcttcacttcgctggggcccagcggccccgccttcgtgcagcccctgctctcagcaggc
caagccccactgctggctcccggtcaggtgggcgtgtcgcctgtgcccagtccacagctg
ccgcctgcctgtgcagcccctggaggtcctgtcataacggcattttactctggcagccct
gcacccacctcctcagcacccctggcccagccgtcccaggcccccccaagcctggtctac
actgtggccaccagcacaaccccacctgcagccaccattctgcccaagggcccggcagcc
cctgccactgccaccccagccccaactagccctttccctagtgccacaggttctatgacc
tacagcttagtggcccccaaggcccagcggcccagcccgaaggccccccagaaagtgaag
gcagccatcgccagcattcccgtggggtcctttgaggcaggtgcctctgggcgacctggc
cctgcaccccggcagcctctggagcctggcccagtccgagagccaactgccccagagtct
gagcttgaggggcagcccacaccaccagcccctccacctgccccagagacctggactccc
acggcccggagcagccccccactgcccccgcctgctgaggagcggaccagcgccaagggt
cctgagaccatggccagcaaattccccagctcatcttcagactggcgcgtccctggtcag
ggcctggagaatcgtggggagcctcccactcctcccagcccagccccagctccagccgta
gcccctggtggcagcagcgagagcagcagtgggcgggcagccggggacacccccgagcgc
aaggaggcggctggtactggcaagaaggtgaaggtgcggcccccgcccctgaagaagacc
tttgactctgtggacaacagggtcctgtcggaagtggactttgaagagcgctttgctgag
ctgcctgagtttcgacctgaggaggtgctgccctcccccaccctgcagtctctggccacc
tcaccccgggccatcctgggctcttaccgcaagaagaggaagaactccacggacctggat
tcagcacccgaggaccctacctcacccaagcgcaagatgagaagacgctccagctgcagc
tcggagcccaacacccccaagagtgccaagtgcgagggggacatcttcacctttgaccgt
acaggtacagaagccgaggacgtgcttggggagctagagtatgagaaggtgccgtactcc
tccctgcggcgcaccctagaccagcgccgggccctggtcatgcagctcttccaggaccat
ggcttcttcccgtcagcccaggccacagccgccttccaggcccgctacgcagacatcttc
ccctccaaggtttgtctgcagttgaagatccgtgaggtgcgccagaagatcatgcaggca
gccactcccaccgagcagccccctggagctgaggctcctctccctgtaccgccccccact
ggcaccgctgctgcccctgcccccactcccagccctgcggggggccctgaccccacctcg
cccagctcggactctggcacggtccaggctgccccgccactgcctccgcccccagagtcg
gggcctggacagcctggctgggagggggctccccagtcctctcccccacccccaggtccc
tccacagctgccacaggcaggtga
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