Rhinopithecus roxellana (golden snub-nosed monkey): 104658850
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Entry
104658850 CDS
T03989
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
rro04926
Relaxin signaling pathway
rro04933
AGE-RAGE signaling pathway in diabetic complications
rro04974
Protein digestion and absorption
rro05146
Amoebiasis
rro05165
Human papillomavirus infection
rro05200
Pathways in cancer
rro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104658850 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104658850 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104658850 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104658850 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
104658850 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
104658850 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104658850 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
104658850 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
104658850 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
104658850 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
104658850 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rro04147
]
104658850 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
rro00536
]
104658850 (COL4A6)
Exosome [BR:
rro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104658850 (COL4A6)
Glycosaminoglycan binding proteins [BR:
rro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104658850 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104658850
NCBI-ProteinID:
XP_010357271
UniProt:
A0A2K6RKZ6
LinkDB
All DBs
Position
7:complement(95127349..95426094)
Genome browser
AA seq
1705 aa
AA seq
DB search
MHPGLWLLLVTLCLTEELAGAGEKSYGKPCGGQDCSGSCQCFPEKGARGRPGPIGIQGPS
GPQGFTGSTGLSGLKGERGSPGLLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGPP
GLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGDPVLAPSSFKGMKGDPGLPGLDG
ITGPQGAPGSPGAVGPAGPPGLQGPPGPPGPPGPDGNMGLGFQGEKGVKGDVGLPGPAGP
PPSTGELEFMGFPKGKKGSKGEPGPKGFPGISGPPGFPGLGSTGEKGEKGIPGLPGPRGP
MGSEGVQGPPGQQGKKGTLGFPGLNGFQGIEGEKGDIGLPGPDVFIDIDGAVISGNPGDP
GVPGLPGLKGDEGIQGLRGPSGVPGSPALSGVPGALGPQGFPGLKGDQGNPGRTTIGAAG
LPGRDGLPGPPGPPGPPSPEFETKTLHNKEPGFPGLRGEQGPKGNPGLKGIKGDSGFCAC
DGGVPNTGPPGEPGPPGPRGLIGLPGLKGARGDRGSGGAQGPAGAPGLVGSPGPSGPKGK
KGEPILSTVSGMPGDRGDSGSQGFPGIIGKPGNDGVPGLPGLPGLPGDGGQGFPGEKGLP
GLPGEKGHPGPPGLPGIGLPGLPGPRGLPGDKGKDGLPGQQGPPGSKGDCCCREKVGKGD
LDTERGITLPCIIPGSYGPSGFPGTPGFPGPKGYRGLPGTPGQPGSSGNKGKPGSPGLVH
LPELPGFPGPRGEKGLPGFPGLPGKDGLPGMIGSPGLPGSKGATGDIFGAENGAPGEQGL
QGLTGDKGLLGDSGLPGLKGVHGKPGLLGPKGERGSPGTPGQVGQPGTPGSSGPYGIKGK
SGPPGAPGFPGTSGHPGKKGTRGEKGPPGSIVKKGLPGLKGLPGNPGLIGLKGSPGSPGV
TGLPALSGPKGEKGSVGFVGFPGIPGLPGIPGTRGLKGIPGSTGKMGPSGHAGTPGEKGD
RGNLGPVGIPSPRRPMSNLWLKGDKGSQGSAGSDGFPGPRGDKGEAGHPGPPGLPGASGL
PGTIKGVSGKPGPPGFMGIRGLPGLKGSSGITGFPGMPGESGSQGIRGSPGLPGTSGLPG
LKGDNGQTLEISGSPGPKGQPGESGFKGTKGRDGPIGNIGFPGNKGEDGKVGVSGDVGLR
GALGFPGIAGMRGDPGLPGSSGHQGAIGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTH
GTPGPSITGVPGPAGLPGPKGEKGYPGIGIGAPGKPGLRGQKGDRGFPGLQGPAGLPGAP
GISLPSLIAGQPGDPGRPGLDGERGRPGPPGPPGPTGPSSSQGNTGDPGFPGIPGPKGPK
GDQGIPGFSGLPGELGLKGMRGEPGFMGTPGKVGPPGDPGFPGMKGKAGPRGSSGPQGAP
GQTPTAEAVQVPPGPLGLPGIDGIPGLTGDPGAQGPVGLQGSKGLPGIPGKDGPSGLPGP
PGALGDPGLRGLQGPPGFEGAPGQQGPFGMPGMPGQSARVGYTLVKHSQSEQVPLCPIGM
SQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLS
TTAPIPMMPVSQTQIPQYISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMH
TAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEL
PVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgttgtgcctgaccgaggaactggcagga
gcgggagagaagtcttatggaaagccgtgtgggggccaagactgcagtgggagctgtcag
tgttttcctgagaaaggagcgagagggcgacctggaccaattggaattcaaggcccatca
ggtcctcaaggattcactggctctactggtttatcgggattgaaaggagaaaggggttcc
ccaggccttctgggaccttatggaccaaaaggagataagggtcccatgggagttcctgga
tttcttggcatcaatgggattccgggccatcctggacagccaggccccagaggcccacct
ggtctggatggctgtaatggaactcaaggagctgtcggatttccaggccctgatggctat
cctgggcttctcggaccacctgggcttcctggtcagaaaggatcaaaaggtgaccctgtc
cttgctccaagtagtttcaaaggaatgaagggggatcctgggctgcctggactggatgga
atcactggcccacaaggagcacccggatctcctggagctgtaggacctgcaggaccacca
ggattacaaggtcctccagggcctcctggtcctcctggtcctgatgggaatatggggcta
ggttttcaaggagagaaaggagtcaagggggatgttggcctccctggcccagcaggacct
ccaccatctactggagagctggaattcatgggattccccaaagggaagaaaggatccaag
ggtgaaccagggcctaagggttttccaggcataagtggccctccaggcttcccgggcctt
ggatctactggagaaaagggagaaaagggaatccctggtttgccaggacctaggggtccc
atgggttcagaaggagtccaaggccctccagggcaacagggcaagaaagggaccctggga
tttcctgggcttaatggattccaaggaattgagggtgaaaagggtgacattggcctgcca
ggcccagatgttttcatcgatatagatggtgctgtgatctcaggtaatcctggagaccct
ggtgtacctggcctcccaggccttaaaggagatgaaggcatccagggcctgcgtggccca
tctggtgtccctggctcaccagcattatcaggtgtcccaggagccctagggcctcaggga
tttccagggctgaagggggaccaaggaaacccaggccgtaccacaattggagcagctggc
ctccctggcagagatggtttgccaggcccaccaggtccaccaggcccacctagtccagaa
tttgagaccaaaactctacacaacaaagagccagggttccctggtctccgaggagaacag
ggtccaaaaggaaacccaggcctcaaaggaataaaaggagactcaggtttctgtgcttgt
gacggtggtgttcccaacactggaccacccggggaaccaggcccacctggtccacggggt
ctcataggccttccaggccttaaaggagccagaggagatcgaggctctgggggtgcacag
ggcccagcaggggctccaggcttagttgggtctccgggtccttcaggacccaaaggaaag
aagggggaaccaattctcagtacagtctcaggaatgccaggggatcgcggtgattctggc
tcccagggcttccctggtataataggaaaaccaggcaacgacggagtaccaggtctacca
ggtctgccaggacttccgggtgatggtgggcagggcttcccaggtgaaaaggggttacct
ggacttcctggtgaaaaaggccatcctggtccacctggcctcccgggaattgggttacca
ggacttcctggaccccgtgggcttcctggagataaaggcaaggatggattaccgggacaa
caaggccctcctggatctaagggtgactgctgctgcagagagaaggttggtaaaggagac
ttagacacagagagaggaatcaccctgccctgtattattccggggtcatatggtccatca
ggatttccaggcactcccggattcccaggccctaaagggtaccgaggcctccctgggacc
ccaggccagcctggatcaagtggaaataaaggaaagccagggagtccaggattggttcat
cttcctgaattaccaggatttcctggacctcgtggggagaagggcttgcctgggtttcct
gggctccctggaaaagatggcttgcctgggatgattggtagtccaggtttacctggttcc
aagggagccactggtgatatctttggtgctgaaaatggtgctccgggggaacaaggccta
caaggattaacaggggacaaaggacttcttggagactctggccttccaggactcaagggt
gtgcacgggaaacctggcttgctaggccccaaaggtgagcggggcagccctggaacacca
ggacaggtgggacagccaggcaccccaggatctagtggtccgtatggcatcaagggcaaa
tctggtcccccaggagcgccaggcttcccaggcacctcagggcatcctggaaagaaagga
acaagaggcgagaaaggccctcctggatcaattgtaaagaaagggctgccagggctaaaa
ggccttcctggaaatccaggcctaatagggctgaaaggaagcccaggctctccaggggtc
actgggttgccagccctctctggacccaaaggagaaaaggggtctgttggattcgtaggt
tttccaggaataccaggtctgcctggtatccctggaacaagaggattaaagggaattcca
ggatcaactggaaaaatgggaccatctggacacgctggcactcctggtgaaaagggagac
agaggcaatctggggccagtcggaatacctagtccaagacgtccaatgtcaaacctttgg
ctcaaaggagacaaaggctctcaaggctcagccggatctgatggatttccagggccaaga
ggtgacaaaggagaggctggtcatcctgggccaccaggcctgcctggagcttctggcctc
ccaggcactatcaaaggagttagtggaaagccaggtccccctggcttcatgggaatccgg
ggcttacctggcctgaaggggtcctctgggataacaggtttcccaggaatgccaggagaa
agtggttcacaaggtatcagagggtcgcctggactcccaggaacatctggtctcccaggc
ctgaaaggagacaacggccagacacttgaaatttccggtagcccaggacccaagggacaa
cctggtgaatctggttttaaaggcacaaaaggaagagatggaccaataggcaatataggc
ttccctggaaacaaaggtgaagatggaaaagttggtgtttctggagatgttggccttcgt
ggagctctagggtttccagggattgccggcatgagaggagatccaggacttccaggctct
tctggtcatcaaggggcaattgggcccctaggaccccccggattaataggacccaaaggc
ttccctggatttcctggtttacatggactgaatgggcttccgggaaccaagggtacccat
ggcactccaggacctagtatcactggtgtgcccgggcctgctggtctccctggacccaaa
ggagaaaaaggatatccaggaattggcatcggagctccagggaagccgggcctgagaggg
caaaaaggtgatcgaggtttcccaggtctccagggccccgctggtctccccggtgcccca
ggcatctccttgccctcactcatagcaggacagcctggtgaccccgggcgaccaggccta
gatggagaacgaggccgcccaggcccccctggacccccaggtcccactgggccatcctcg
agtcaaggcaacaccggagaccctggcttccctggaattcctggacctaaagggcctaag
ggagaccaaggaattccaggtttttctggccttcctggagagctaggactgaaaggcatg
agaggtgagcctggcttcatggggactccaggcaaggttgggccacctggagacccagga
tttcccgggatgaaggggaaggcagggccaagaggctcttctggcccccaaggtgctcct
ggacaaacaccaactgcagaagctgtccaggttcctcctggacccttgggtctaccaggg
atcgatggcatccctggcctcactggggaccctggggctcaaggccctgtaggcctacaa
ggctccaaaggtttacctggcattcccggcaaagatggtcccagtgggctcccaggccca
cctggggctcttggtgatcctggtctgcgtggactgcaaggccctccaggatttgaagga
gctccagggcagcaaggccccttcgggatgcctggaatgcctggccagagcgcgagagtg
ggctacacgttggtaaagcacagccagtcggaacaggtgcccctgtgtcccatcgggatg
agccagctatgggtggggtacagcttactgttcgtggaggggcaagagaaagcccataac
caggacctgggctttgctggctcctgtctgccccgcttcagcaccatgcccttcatctac
tgcaacatcaacgaggtgtgccactatgccaggcgcaatgataaatcctactggctctcc
actactgcccctatccccatgatgcccgtcagccagacccagattccccagtacatcagc
cgctgctctgtgtgtgaggcaccctcgcaagccattgctgtgcacagtcaggacatcacc
atcccgcagtgccccctgggctggcgcagcctctggattgggtactccttcctcatgcac
actgccgctggtgccgagggtggaggccagtccctggtctcacctggctcctgcctagag
gactttcgggccacccctttcatcgagtgcagtggtgcccgaggcacctgccactacttt
gcaaacaaatacagtttctggttgaccacagtggaggagaggcagcagtttggggagttg
cctgtgtctgaaacgctgaaagctgggcagctccacactcgagtcagtcgctgccaggtg
tgtatgaaaagcctgtag
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