Rhinopithecus roxellana (golden snub-nosed monkey): 104659615
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Entry
104659615 CDS
T03989
Symbol
CDRT1
Name
(RefSeq) LOW QUALITY PROTEIN: CMT1A duplicated region transcript 1 protein
KO
K10266
F-box and WD-40 domain protein 10
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rro04121
]
104659615 (CDRT1)
Ubiquitin system [BR:
rro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104659615 (CDRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
EIF3I
Beta-prop_TEP1_C
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
Beta-prop_SPT8
Beta-prop_WDR75_1st
F-box
Beta-prop_WDR19_2nd
Beta-prop_IFT140_2nd
F-box-like
Beta-prop_IP5PC_F
PP2C_C
Motif
Other DBs
NCBI-GeneID:
104659615
NCBI-ProteinID:
XP_030778700
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Position
19:34065156..34113297
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AA seq
1049 aa
AA seq
DB search
MENLESTLKNAPXFHCEKGTDSIPLCQKCETCVLAWKIFSTKEWFCRINDISQRRFLVSI
LKQLNSLYLLHYFQNILQTTQGKDFIYNRSRIDLSKKEGKVAKSLNQMLDKTVEQKMKEI
LYWFGNSTHWTKANYTLLLLQMCNPKLLLTAANVIRVLFLREQNSISGLNQDITDVCFSP
EKDDSSKSATSQVYWTAKTQHTSLPLSKGPENEHLLGAASNPEEPWRNSLQCISEMNRLF
SEKGGITKLGYDPCSLLVNLDDIRDLSSGFSKYRDFIRYLPIHLSKYILRMLDRHTLNKC
ASVSQHWAAMAQQVKTDLSAHAFIQNQIIFMQGSYTRGIDPNYANKVSIPVPKMVDDGKR
MRVKHPKWKLRTKNEYNLWTAYQNQETQQVLMEERNVFCGTYNVRILSDTWDQKRVIHYS
GGDLIAVSSNRKIHLLDIIQVKVIPVEFRGHAGSVRALFLCEEENFLLSGSYDLSIRYWD
LKSGACTRIFSGHQGTITCMDLCKDRLVSGGRDCQVKVWDIDTGKCLKTFRHKDPILATR
INDTYIVSSCERGVVKVWHIVMAQLVKTLNGHEGAVKCLFFDQWHLLSGSTDGLVMAWSM
VGKYERCLMAFRHPKEVLHVSLVFLRVISACADGKIRIYNFLNGNCMKVIKANGRGDPVL
SFFIQGNRMVVNTESNVLMFQFEHIKWQYAMEKMKQKKNKEKEEEKEENSLMEILSKSNM
QVHSPRESVSSKQTVIQELLPSKPPKSRVLLKPAKFSSAVLIEELQSQGKSKSPRRDADD
VEKAQKQGQLETPEKLLNHPKKKSWKIPMSPDQFLLTVSALQQAHNSGKFAYPCRPRTEI
IDVWGPSISYPRKVLNFKGKSIQHAVDRLRLSNPPTDVKQISIPLEIQKLQPNLKISLHS
PRVQSTLPQPMIIRSRFSGSLKGGDQVTSSIERAVCSPLTSMQVIKPNRMLAPQVGTATL
SLNKERPRIYTALDPLRVNTEFVLLTVKEEKEHQEAKMEEYQARESTGVVDPGKASKAAW
IRKIKGLPIDNFMKQGKTAAPELGQNVFI
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctggaatcaacgctcaagaatgcccccnattttcattgtgagaagggaacc
gattccatccctctatgccagaagtgtgagacgtgtgtcttagcgtggaagatcttctct
accaaagagtggttctgcaggatcaatgacatatcacagaggaggtttctagttagcatt
ctgaagcagttaaatagcttgtatttgttacactatttccaaaatatccttcagaccaca
cagggaaaggatttcatctataacaggtcccggatcgacctcagcaagaaagaggggaaa
gttgcgaagtccttgaaccaaatgttggataaaacagtagaacagaagatgaaggagatc
ttgtactggtttgggaacagcacccactggaccaaggcgaattatactctcttactgctg
cagatgtgcaaccccaaattactgctcactgctgccaatgtgatcagagtcctgtttctg
agagagcagaacagtatctcagggctcaatcaagacatcacagatgtgtgtttttccccc
gagaaagacgacagctccaagtctgcgacctcacaagtctattggacagccaaaactcag
cacacatcccttcctttgtccaaaggcccagaaaatgaacacttacttggggcagcatct
aaccctgaggaaccatggaggaattcactccagtgtatttccgaaatgaataggctgttt
tctgaaaaaggaggcataaccaagctagggtacgatccctgcagtctattggttaacttg
gatgacatcagagacctgtcttctgggttcagcaaataccgagacttcatccgttacctg
cccatccacctctccaagtacattctaagaatgctggatagacacaccctgaacaagtgt
gcctctgtgagccagcactgggccgccatggctcaacaggtcaagacggacttgtcagcg
cacgccttcattcagaaccagattatcttcatgcaggggtcctacacaagaggaattgat
cctaattatgccaataaggtttctatcccagttcctaaaatggtagatgacgggaagcgc
atgcgtgtgaaacatccgaagtggaagctgaggacgaagaatgagtacaacctgtggact
gcataccagaaccaggaaacgcagcaggtcctaatggaggagagaaatgttttctgtgga
acctacaatgttcgcattctctctgacacgtgggatcaaaaaagagtcatccactattcc
gggggagatctgatagctgtgtcatctaatcgaaagatccaccttctggacatcatacaa
gtaaaagtgatacccgttgaattccgaggccatgctgggagtgtccgggccctcttcctg
tgtgaggaggaaaattttctcctaagtggaagttatgacctaagtatcagatactgggat
ctgaaaagtggggcttgcacacgaatcttcagtggtcaccaggggactatcacttgcatg
gatttgtgtaaggacaggctcgtgtcgggaggaagagattgccaggtaaaagtatgggat
atagacacagggaagtgcctgaagacgtttagacacaaagaccccatcttggccaccagg
atcaatgatacctacattgtgagcagctgtgagcgaggggtggtgaaagtgtggcacatt
gtcatggcccagttggtaaagactctcaatggccatgagggagccgttaagtgcctgttc
ttcgaccagtggcatctcctctcgggaagcactgatggcctggtcatggcctggagcatg
gtggggaagtatgagcgctgcctgatggccttcaggcatcccaaggaggtgctccacgtg
tcccttgtcttcctccgggtcatcagcgcctgcgcagatggcaagatcagaatttacaat
ttcctcaacgggaactgtatgaaggtgataaaagccaatggcagaggcgatcctgtgctg
tccttctttattcagggcaacaggatggtggtcaacacagaaagcaatgttctcatgttc
cagtttgaacacataaagtggcagtatgccatggaaaaaatgaaacaaaagaagaataag
gagaaagaggaggaaaaagaagaaaatagcctcatggaaattctctctaagtctaatatg
caggttcacagcccgagagaatctgtatccagtaaacaaactgtgatccaagagctccta
ccgagcaaacctcccaagtcccgagtactcctgaagccggccaagttctcttcagcagtg
ttaatagaggaacttcaaagtcaaggaaagtcaaaatcaccccgaagagatgcagatgat
gtcgagaaagcacaaaaacaaggacaattggaaactcctgaaaaactgctcaatcaccca
aagaaaaagtcttggaaaattcctatgtcacctgaccaattcctcctgactgtcagcgcc
ctgcagcaagcccataattccgggaaattcgcctatccctgtaggccccgaacagaaatt
attgatgtctggggaccttcaatttcatacccaaggaaggtcttgaatttcaaaggaaaa
tcaatccaacatgcagttgatcggttgagattgagcaatcctcctacagatgtgaaacaa
atcagtattccccttgaaatccagaaactgcagcccaacttgaagatctctttgcacagt
cccagagtccagtccaccttgccgcagcccatgattatccgctccaggttctctggcagc
ttaaagggtggagaccaagtgaccagttcaattgaaagggcagtgtgcagtcccctgacc
agtatgcaggtcattaaaccaaaccgcatgctagctccacaagtgggcacagccacccta
tctcttaacaaagaacggcctcgcatctacacagcccttgatccccttagagtgaacact
gagttcgtgctgttgaccgtgaaggaggagaaagagcaccaggaagccaagatggaggaa
tatcaggccagggagtccactggagtggttgatccaggaaaagccagcaaagctgcatgg
atcaggaaaatcaaaggcctgcctattgataatttcatgaagcaagggaaaacagcagcc
cctgaacttggacaaaatgtatttatctga
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integrated database retrieval system
