Rhinopithecus roxellana (golden snub-nosed monkey): 104660867
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Entry
104660867 CDS
T03989
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rro03036
]
104660867 (SHOC1)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104660867 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
104660867
NCBI-ProteinID:
XP_010359642
UniProt:
A0A2K6R494
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All DBs
Position
16:complement(113223785..113331606)
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AA seq
1444 aa
AA seq
DB search
MTDTSVLDQWKASFFVEDFLEKKTITRMVTQINCEFEEFVPSSNPDSQIEVEEVSLYNHM
DYNEVFTPVSCLEKYSALQKQNQDLFIDDKGILFVSNRKHLPTLHALLSRLKLFLVKDPL
LDFKGQIFTEVNFSRECFSLQETLEAFVKEDFCMDKVNFCQEKLEDTTRLNEPSSFLIEY
EFLIPPSLKPEIDIPSLSELKELLNLEPEIINYVDESEKLFERDLTNKHGIEDIGDIKFS
STEILTIQNQSEPEECSKPGELEMPITPLFLTCQHTSVNSLCTELQTFPLSPVCKINLLT
AEESANKYYMMWQLERCRSPLNPFLLTAPRIQEPHSQYSVTDLKKILSVKEESLVINLEK
AEWWKQAGLNLKMMETLEHLNTYLCHNNLSSNDTEIEVFLPTKVLQLESCLEHKSHSSPI
ALIDEKSTNDRLSLPQKSPSLAKEVPDLCFSDGYFSDKRAAKEEKPKNDQEPVNRIIQKK
ENGDHFELDCTGPSIKSSSSSIIKKTSFEHGKKQENDLDLLSDFIMLRNKYKTCTSKTEV
TNSDEKHDKEACSLTLQEESPIVHVNKTLEEINQERGTDNVIEIQASDSQCQAFCLLEAA
ASPILKNLVSSCTLPTAKWKFATVIFDQTRFLLKEQEKVVSDAVHQGTIDEREMTFKHAA
LLHLLVTVRDVLLTCSLDTALGYLSKAKDIYNSILGPHLGDIWRQLEIVQFIRGKKPEIN
YKIQELQCQILNWMQSQQQIKVLIIIRMDSDGEKHLLIQILNKIEGLTLTVLHSKERKDF
LESEGVLKGTSSCVVVHNQYIGADFPWSNFTFVVEYNYVEDSCWTKHCKDLNIPYMAFKV
ILPDTVFKRSTLLDRFGGFLLEIQIPYVFFASEGLLNTPDILQLLESNYNISLVERECSE
SLKLFGSSEHYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSLQYRYCWIILYTK
ETLNSEYPLTEKTLHHLALIYAALVSFGLNSEELDVKLVIAPGVEATALIIRQIADHNLM
TSKRDPHEWLDKSWLEVSPSEEEMYLLDFPCVNPLVAQLMLNKGPSLHWILLATLCQLQE
LLPEVPEKVLKHFCSITSLFKISSSSVTKSPQISSPQDNRNRISTLSSRSSASDLDSVIQ
EHNEYYQYLGLGETVQEDKTTTLNDNSSIMELKEISGFLPPVTSYNQTSYWKDSSCKPNI
VQNTPFLINIESRRPAYNSFLNHSDSESDVFSLGLTQMNCETIKSPSDAQKRVSIVPHFI
NSQKRRTHEAKDFISKEVSDPIFSLEGSHSPLHWNLKKNIWEQENLPFNLQYGAEQTTCN
KLYSQKGNLFTDQQKCLSDEFEGLTCESSNDETFWRELPSVPSLDLFCASDSNANQKEFN
SLYFYQRAGKSLGQKRHPESSFNSGDKESLTGFMYSQVPQFKKRRLAYEKVPGRVDGQTR
LRFF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgacagatacctcagtcttggaccaatggaaagcaagtttctttgtggaggatttcctt
gagaaaaaaacaattacaagaatggtgacccagattaattgtgaatttgaggaatttgtt
ccaagttcaaatccagactcccaaattgaagtagaggaggtcagtttatacaaccacatg
gactacaatgaagtctttacccctgtcagttgtttagaaaaatattcagcacttcaaaaa
cagaaccaagatttatttattgatgataaaggaatactttttgtaagtaatagaaaacac
ctaccaactttgcatgctctcttgagtagactaaaactatttttggtaaaggatcctctt
ttagatttcaaaggacagatcttcacagaagttaatttttccagggaatgtttctctctt
caagaaactttggaagcttttgtgaaagaagatttttgtatggataaagtgaacttttgt
caggagaaactagaagatacaacacgtttaaatgagccatcaagttttcttattgagtat
gaattcttaatacctccaagcctcaaaccagaaattgatattccatcactctcagaactg
aaggagttattaaacctagagccagaaataataaactatgtagatgaaagtgaaaagctt
ttcgaaagagatcttactaacaagcatggaattgaggatatcggggacataaaattcagc
tccacagagattttgaccattcaaaaccagagtgaaccagaagagtgcagtaaaccagga
gagttagaaatgccaataactcctctattcctaacatgccaacatacttcagtgaattca
ttatgcacagaacttcagacatttccattatctccagtgtgtaaaattaatttgcttact
gctgaagaatcagctaataaatactacatgatgtggcaattagaaagatgtagaagccct
ttgaacccatttttgcttacagcgccaagaattcaagagccccacagccaatattcagtt
acagatttgaaaaagatactttcggttaaagaagaaagccttgtgattaatctggaaaag
gcagagtggtggaaacaagcaggactaaatctgaaaatgatggaaacgttggaacatctg
aatacatatttatgtcataataatttgtcttctaatgacactgaaattgaggtatttttg
cctacaaaagtgcttcaattagaatcatgtttagaacataaaagtcattcttcacctatt
gcacttattgatgaaaaatctacaaatgatcgtttatcacttccacaaaagagtccatct
ctggcaaaagaagtaccagatctgtgtttttctgatggatatttctctgataaaagagca
gcaaaagaagaaaaaccaaagaatgaccaagaaccagtaaatagaataatccaaaagaaa
gaaaatggagatcactttgaacttgattgcacaggaccatctattaaatcatcttcctct
tcaataattaaaaaaacatcttttgaacatggtaaaaaacaagagaatgatttggacctt
ttgagcgactttattatgctgcgaaataaatataagacttgcacctcaaagactgaagtc
acaaacagtgatgaaaaacatgataaagaagcatgttctttgacacttcaagaagaaagt
cctattgttcatgttaataaaaccctggaggaaataaatcaggaaaggggaacagataat
gtcattgaaattcaagcgtcagatagccagtgccaagcattttgcctcctcgaagcagca
gcttctcctatcttaaaaaatcttgtatcctcctgtactctccctactgctaagtggaaa
tttgccactgttatttttgaccaaacaaggtttctcttaaaggaacaagaaaaagtagta
agtgatgctgttcaccaaggtacaattgatgaaagagaaatgactttcaagcatgccgct
ctcttacatcttctggtaacagttagagatgtccttttaacatgcagcttggacacagca
ttgggatatttgtcaaaggcaaaagatatctacaatagcattttaggcccccatttgggt
gacatttggagacagctggaaattgtacagtttattagggggaaaaagcctgaaatcaac
tacaagatacaagaattgcaatgtcagatactaaattggatgcaaagtcaacagcaaatt
aaggtactgattataataagaatggactcagatggtgaaaaacatttactcattcaaatt
cttaacaaaatagaaggtttaacactgactgtccttcattcaaaagaaagaaaagatttt
ctggaatctgaaggtgttttaaagggtacaagttcctgtgtagttgtacataatcaatat
attggagcagatttcccctggagtaatttcacatttgtagtggaatacaattatgtggaa
gactcttgttggactaaacactgcaaagatttgaatattccttacatggcctttaaagtg
attcttccagacacagtttttaaaagaagcaccttgttggatagatttggaggttttctt
ttggaaattcagattccatatgtgttttttgcatctgaaggacttcttaatactccagac
atacttcagctgctagaatccaactataacatctcactagtagagagagaatgcagtgag
tcattgaaactcttcggaagttcagagcattatgtagtggtaacagttgatgaacacact
gccataattttgcaggatctagaagaattgaattgtgagaaggcatcagacaatatcatt
atgaggctgatggcattatcattacagtacagatattgttggataattttatataccaaa
gaaacattaaattcagagtatccgcttacagaaaagacacttcatcacctagcactgatt
tatgcagctttggtttcatttgggctaaactctgaagaactggatgtaaagcttgtaatt
gccccaggagtagaagcaactgccttgataattcgacaaattgctgaccacaatttaatg
acctcaaagagagatcctcatgaatggttagataaatcctggcttgaagtttcaccatct
gaggaagaaatgtacttacttgattttccatgtgttaacccattggtggctcagctcatg
ctaaataaaggaccttcactgcattggatattattagcaactctgtgtcaacttcaggaa
ctcctacctgaagtcccagaaaaagtgttaaagcatttttgtagcatcacttccctattc
aagattagttcttcttctgtaacaaaatcaccgcaaatttcatcacctcaggacaatagg
aatcggattagtaccttgtcttctcggagttcagcatctgatttagactctgtcattcaa
gaacataatgaatattatcagtatttaggattaggagagacagtgcaggaagacaaaacc
accactttgaatgacaactcttccattatggaactaaaagaaatctcaggttttttacca
cctgtgacttcatacaatcagaccagctactggaaagactctagttgtaaacctaatata
gtgcagaatactccttttctaattaatatagaatcaaggagaccggcttataactccttt
ctaaaccacagtgattcagagtcagatgtcttttctttgggtctaacacaaatgaactgt
gaaactataaaatcaccaagtgacgctcagaagagagtgtcaattgtcccccattttata
aattctcagaaaaggagaacacatgaagcaaaagatttcataagtaaagaagtatctgac
cctatcttttcactagagggctctcattctcctcttcattggaacttaaagaaaaatata
tgggaacaagagaatctcccgttcaacttacaatatggtgcagagcagactacatgtaac
aaattgtactctcagaaaggtaatttattcactgatcagcaaaaatgtctatcagatgag
tttgaaggcctcacatgtgaaagttcgaatgatgagactttctggagagaattaccatct
gtccccagtttggatttattttgtgcttctgattctaatgcaaatcaaaaagaattcaac
agcctttatttctaccaaagagctggaaaaagtttaggacagaaaaggcatcctgaatct
tcatttaactcaggagacaaggaatcattaacaggttttatgtactcacaagtaccacaa
ttcaaaaaacgacgtctagcctatgaaaaagtcccgggtagagttgatgggcagactcgg
ctgaggtttttttga
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