Rhinopithecus roxellana (golden snub-nosed monkey): 104661142
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Entry
104661142 CDS
T03989
Symbol
CACNA1A
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04010
MAPK signaling pathway
rro04020
Calcium signaling pathway
rro04721
Synaptic vesicle cycle
rro04723
Retrograde endocannabinoid signaling
rro04724
Glutamatergic synapse
rro04725
Cholinergic synapse
rro04726
Serotonergic synapse
rro04727
GABAergic synapse
rro04728
Dopaminergic synapse
rro04730
Long-term depression
rro04742
Taste transduction
rro04930
Type II diabetes mellitus
rro05017
Spinocerebellar ataxia
rro05032
Morphine addiction
rro05033
Nicotine addiction
rro05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104661142 (CACNA1A)
04020 Calcium signaling pathway
104661142 (CACNA1A)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
104661142 (CACNA1A)
04727 GABAergic synapse
104661142 (CACNA1A)
04725 Cholinergic synapse
104661142 (CACNA1A)
04728 Dopaminergic synapse
104661142 (CACNA1A)
04726 Serotonergic synapse
104661142 (CACNA1A)
04730 Long-term depression
104661142 (CACNA1A)
04723 Retrograde endocannabinoid signaling
104661142 (CACNA1A)
04721 Synaptic vesicle cycle
104661142 (CACNA1A)
09157 Sensory system
04742 Taste transduction
104661142 (CACNA1A)
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
104661142 (CACNA1A)
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
104661142 (CACNA1A)
09165 Substance dependence
05032 Morphine addiction
104661142 (CACNA1A)
05033 Nicotine addiction
104661142 (CACNA1A)
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
104661142 (CACNA1A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rro04040
]
104661142 (CACNA1A)
Ion channels [BR:
rro04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104661142 (CACNA1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
104661142
NCBI-ProteinID:
XP_030791728
LinkDB
All DBs
Position
8:complement(3042435..3350356)
Genome browser
AA seq
2498 aa
AA seq
DB search
MARFGDEMPARYGGGGSGAAAGVVVGAGGGRGAGGSRQGGQPGAQRMYKQSMAQRARTMA
LYNPIPVRQNCLTVNRSLFLFSEDNVVRKYAKKITEWPPFEYMILATIIANCIVLALEQH
LPDDDKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTG
ILATVGTEFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIF
AIIGLEFYMGKFHTTCFEEGTDDIQGESPAPCGTEEPARTCPNGTKCQPYWEGPNNGITQ
FDNILFAVLTVFQCITMEGWTDLLYNSNDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLS
GEFAKERERVENRRAFLKLRRQQQIERELNGYMEWISKAEEVILAEDETDGEQRHPFDAL
RRTTIKKSKTDLLNPEEAEDQLADIASVGSPFARASIKSAKLENSTFFHKKERRMRFYIR
RMVKTQAFYWTVLSLVALNTLCVAIVHYNQPEWLSDFLYYAEFIFLGLFMSEMFIKMYGL
GTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPGTSFGISVLRALRLLRIFKVTKYWASLR
NLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDEGTPPTNFDTFPAAIMTV
FQILTGEDWNEVMYDGIKSQGGVQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQ
ELTKDEQEEEEAANQKLALQKAKEVAEVSPLSAANMSIAVKEQQKNQKPAKSVWEQRTSE
MRKQNLLASREALYNEMDPDERWKAAYTRHLRPDMKTHLDRPLVVDPQENRNNNTNKSRA
AEPTVDQRLGQQRAEDFLRKQTRYHDRARDPSGSAGLDARRPWAGSQEAELSREGPYGRE
SDHHAREGSLEQPGFWEGEVERGKAGDPHRRHVHRQGGSRESRSGSPRTGADGEPRRHRT
HRRPGEEGPEDKAERRVRHREGSRPARGGEGEGEGPDGGERRRRHRHGAPATYEGDARRE
DKERRHRRRKENQGSGVPVSGPNLSTTRPIQQDLGRQDPPLAEDIDNMKNNKLATAESAG
PHDSLGHTGLPQSPAKMGNSTDPGPTPAIPAMATNPQNAASRRMPNNPGNPSNPGPPKTP
ENSLIVTNPSGTQTNSAKTARKPDHTTVDIPPACPPPLNHTVVQVNKNANPDPLPKKEDE
KKEEEEDDRGEDGPKPMPPYSSMFILSTTNPLRRLCHYILNLRYFEMCILMVIAMSSIAL
AAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHQGAYFRDLWNILDFIVV
SGALVAFAFTGNSKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNIL
IVYMLFMFIFAVVAVQLFKGKFFHCTDESKEFEKDCRGKYLLYEKNEVKARDREWKKYEF
HYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFENQGPSPGYRMEMSIFYVVYFVVFPFF
FVNIFVALIIITFQEQGDKMMEEYSLEKNERACIDFAISAKPLTRHMPQNKQSFQYRMWQ
FVVSPPFEYTIMAMIALNTIVLMMKFYGASVAYENALRVFNIVFTSLFSLECVLKVMAFG
ILNYFRDAWNIFDFVTVLGSITDILVTEFGNNFINLSFLRLFRAARLIKLLRQGYTIRIL
LWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDVEDEDSDEDEFQITEHNNFRT
FFQALMLLFRSATGEAWHNIMLSCLSGKPCDKNSGIQSRECGNEFAYFYFVSFIFLCSFL
MLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRVWAEYDPAAWGRMPYLDMYQMLRHMSP
PLGLGKKCPARVAYKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGADKQQMDA
ELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKAKKLQAMREEQ
DRTPLMFQRMEPPSPTQEGGPGQNALPSAQLDPGGALMAHESGLKESPSWVTQRAQEMFQ
KTGTWSPERGPPTDMPNSQPNSQSVEMREMGRDGYSDSEHYLPMEGQGRAASMPRLPAEN
QRRRGRPRGNNLSTISDTSPMKRSASVLGPKARRLDDYSLERVPPEENQRHHQRRRDRSH
RTSERSLGRYTDVDTGLGTDLSMTTQSGDLPSKERDQERGRPKDRKHRQHHHHHHHHHPP
PPDKDRYAQERPDHGRARARDQRWSRSPSEGREHMAHRQGSSSVSGSPAPSTSGTSTPRR
GRRQLPQTPSTPRPHVSYSPVIRKAGGSGTPQQQQQQAVARPGRAATSGPRRYPGPTAEP
LAGDRPPTGGHSSGRSPRMERRVPGPARSESPRACRHGGARWPASGPHVSEGPPGPRHHG
YYRGSDYDEADGPGSGGGEEAMAGAYDAPPPARHASSGATGRSPRTPRASGPACASPSRH
GRRLPNGYYPAHGLARPRGPGSRKGLHEPYSESDDDWC
NT seq
7497 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcttcggagacgagatgccggcccgctacgggggaggaggctccggggctgcc
gccggggtggtcgtgggcgccggaggcgggcgaggagccgggggcagccggcagggcggg
cagcccggggcgcaaaggatgtacaagcagtcaatggcgcagagagcgcggaccatggca
ctctacaaccccatccccgtccgacagaactgcctcacggttaaccggtctctcttcctc
ttcagcgaagacaacgtggtgagaaaatacgccaaaaagatcaccgaatggcctcccttt
gaatatatgattttagccaccatcatagcgaattgcatcgtcctcgcactggagcagcat
ctgcctgatgatgacaagaccccgatgtctgaacggctggatgacacagaaccatacttc
attggaattttttgtttcgaggctggaattaaaatcattgcccttgggtttgccttccac
aaaggctcctacttgaggaatggctggaacgtcatggactttgtggtggtgctaacaggc
atcttggcgacagttgggacagagtttgacctacggacgctgagggcagttcgagtgctg
cggccgctcaagctggtgtctggaatcccaagtttacaagtcgtcctgaagtcgatcatg
aaggcgatgatccctttgctgcagatcggcctcctcctattttttgcaatccttattttt
gcaatcatagggttagaattttatatgggaaaatttcataccacctgctttgaagagggg
acagatgacattcagggtgagtctccggctccatgtgggacagaagagcccgcccgcacc
tgccccaatgggaccaaatgtcagccctactgggaagggcccaacaacgggatcactcag
ttcgacaacatcctgtttgcagtgctgactgttttccagtgcataaccatggaagggtgg
actgatctcctctacaatagcaacgatgcctcagggaacacttggaactggttgtacttc
atccccctcatcatcatcggctccttttttatgctgaaccttgtgctgggtgtgctgtca
ggggagtttgccaaagaaagggaacgggtggagaaccggcgggcttttctgaagctgagg
cggcaacaacagattgaacgtgagctcaatgggtacatggagtggatctcaaaagcagaa
gaggtgatcctcgccgaggatgaaactgacggggagcagaggcatccctttgatgctctg
cggagaaccaccataaagaaaagcaagacagatttgctcaaccccgaagaggctgaggat
cagctggctgatatagcctctgtgggttctcccttcgcccgagccagcattaaaagtgcc
aagctggagaactcgaccttttttcacaaaaaagagaggaggatgcgtttctacatccgc
cgcatggtcaaaactcaggccttctactggactgtactcagtttggtagctctcaacacg
ctgtgtgttgctattgttcactacaaccagcccgagtggctctccgacttcctttactat
gcagaattcattttcttaggactctttatgtccgaaatgtttataaaaatgtacgggctt
gggacgcggccttacttccactcttccttcaactgctttgactgtggggttatcattggg
agcatcttcgaggttatctgggctgtcataaaacctggcacatcctttggaatcagcgtg
ttacgagccctcaggttattgcgtattttcaaagtcacaaagtactgggcatctctcaga
aacctggtcgtctctctcctcaactccatgaagtccatcatcagcctgttgtttctcctt
ttcctgttcattgtcgtcttcgcccttttgggaatgcaactcttcggcggccagtttaat
ttcgatgaagggactcctcctaccaacttcgatacttttccagcagcaataatgacggtg
tttcagatcctgacgggcgaagactggaacgaggtcatgtacgacgggatcaagtctcag
gggggcgtgcagggcggcatggtgttctccatctatttcattgtactgacactcttcggg
aactacaccctcctgaatgtgttcttggccatcgctgtggacaatctggccaacgcccag
gagctcaccaaggacgagcaagaggaagaagaagcagccaaccagaaacttgccctacag
aaagccaaggaggtggcagaagtgagtcctctgtccgcggccaacatgtccatagctgtg
aaagagcaacagaagaatcaaaagccagccaagtccgtgtgggagcagcggaccagtgag
atgcgaaagcagaacttgctggccagccgggaggccctgtacaatgaaatggacccggac
gagcgctggaaggctgcctacacccggcacctgcggcctgacatgaagacgcacttggac
cggccgctggtggtggacccgcaggagaaccgcaacaacaacaccaacaagagccgggcg
gctgagcccaccgtggaccagcgcctcggccagcagcgcgctgaggacttcctcaggaaa
cagacccgctaccacgatcgggcccgggaccctagcggctcggcgggcctggacgcacgg
aggccctgggcgggcagccaggaggccgagttgagccgggagggaccctatggccgcgag
tcggaccaccacgcccgggagggcagcctggagcagcccgggttctgggagggcgaggtc
gagcgaggcaaggccggggatccccaccggaggcacgtgcaccggcaggggggcagcagg
gagagccgcagcgggtccccgcgcacgggcgcggacggggagccccggcggcatcgcacg
caccgcaggcccggggaggagggcccggaggacaaggcggagcggagggtgcggcaccgc
gagggcagccggccggcccggggcggcgagggcgagggcgagggccccgacggcggcgag
cgaaggaggcggcaccggcacggcgctccggccacgtacgagggggacgcgcggagggag
gacaaggagaggaggcatcggaggaggaaagagaaccagggctctggggtccctgtgtca
ggccccaacctgtcaaccacccggccaatccagcaggacctgggccgccaagacccaccc
ctggcagaggacattgacaacatgaagaacaacaaactggccaccgcggagtcggccggt
ccccacgacagcctcggccacaccggcctgccccagagcccagccaagatgggaaacagc
accgaccctggccccacgccagccatccctgccatggccaccaatccccagaacgccgcc
agccgccggatgcccaacaacccggggaacccatccaatcccggccctcccaagaccccc
gagaacagccttatcgtcaccaaccccagcggcacccagaccaattcagctaagactgcc
aggaaacccgaccacaccacggtggacatccccccggcctgcccacccccactcaaccac
actgttgtgcaagtgaacaaaaacgccaacccagacccactgccaaaaaaagaggacgag
aagaaggaggaggaggaagacgaccgtggggaagacggccctaagccaatgcctccctat
agctccatgttcatcctgtccacgaccaacccccttcgccgcctgtgccattacatcctg
aacctgcgctactttgagatgtgcatcctcatggtcattgccatgagcagcatcgccctg
gccgccgaggaccctgtgcagcccaacgcacctcggaacaatgtgctgcgatattttgac
tacgtttttacaggtgtctttacctttgagatggtgatcaagatgatcgacctggggctc
gtcctgcatcagggtgcctacttccgtgacctctggaatattctcgacttcatagtggtc
agtggggccctggtagcctttgccttcaccggcaatagcaaaggaaaagatatcaacacg
attaaatccctccgagtcctccgggtgctgcgacctcttaaaaccatcaagcggttgcca
aagctcaaggctgtgtttgactgtgtggtgaactcgcttaaaaacgtcttcaacatcctc
atcgtctacatgctattcatgttcatcttcgccgtggtggccgtgcagctcttcaagggg
aagttcttccactgcaccgacgagtccaaggagtttgagaaagattgtcgaggcaaatac
ctcctctacgagaagaatgaggtgaaggcgcgagatcgggagtggaagaagtatgaattc
cattatgacaacgtgctgtgggctctgctgaccctcttcaccgtgtccacgggagaaggc
tggccacaggtcctcaagcactcagtggatgccacctttgagaaccagggccctagccct
gggtaccgcatggagatgtccattttctacgtcgtctactttgtggtgttccccttcttc
tttgtcaatatctttgtggccttgatcatcatcaccttccaggagcaaggggacaagatg
atggaggaatacagcctggagaaaaatgagagggcctgcatcgatttcgccatcagcgcc
aagccgctgacccgacacatgccgcagaacaagcagagcttccagtaccgcatgtggcag
ttcgtggtgtctccgcctttcgagtacacgatcatggccatgatcgccctcaacaccatc
gtgcttatgatgaagttctatggggcttctgttgcttatgaaaacgccctgagggtgttc
aacatcgtcttcacctccctcttctctctggaatgtgtgctgaaagtcatggcttttggg
attctgaattatttccgcgatgcctggaacatcttcgactttgtgactgttctgggcagc
atcaccgatatcctcgtgactgagtttgggaataacttcatcaacctgagctttctccgc
ctcttccgagctgcccggctcatcaaacttctccgtcagggttacaccatccgcattctt
ctctggacttttgtgcagtccttcaaggccctgccttatgtctgtctgctgatcgccatg
ctcttcttcatctatgccatcattgggatgcaggtgtttggtaacatcggcatcgatgtg
gaggacgaggacagtgatgaagatgagttccaaatcactgagcacaataacttccggacc
ttcttccaggccctcatgcttctcttccggagtgccaccggggaagcctggcacaacatc
atgctttcctgcctcagtgggaagccgtgtgataagaactctggcatccagtctcgagag
tgtggcaacgaattcgcttatttttacttcgtttccttcatcttcctctgctcatttctg
atgctgaatctctttgtcgccgtcatcatggacaacttcgagtacctcacccgagactcc
tccatcctgggtccccaccacctggatgagtacgtgcgtgtctgggccgagtatgacccc
gcagcttggggccgcatgccttacctggacatgtatcagatgctgagacacatgtctccg
cccctgggtctggggaagaagtgtccggccagagtggcttacaagcggcttctgcggatg
gacctgcccgtcgcagatgacaacaccgtccacttcaattccaccctcatggctctgatc
cgcacagccctggacatcaagattgccaagggaggagccgacaaacagcaaatggacgct
gagctgcggaaggagatgatggcgatttggcccaacctgtcccagaagacgctagaccta
ctggtcacacctcacaagtccacagacctcaccgtggggaagatctacgcggccatgatg
atcatggagtactaccggcagagcaaggccaagaagctgcaggccatgcgcgaggagcag
gaccggacacccctcatgttccagcgcatggagcccccgtccccaacgcaggaaggggga
cctggccagaacgccctcccctctgcccaactggacccaggaggagccctgatggctcac
gaaagcggcctcaaggagagcccgtcctgggtgacccagcgtgcccaggagatgttccag
aagacgggcacgtggagcccagaacgaggtccccccaccgacatgcccaacagccagcct
aactctcagtccgtggagatgcgagagatgggcagagatggctactccgacagcgagcac
tacctccccatggaaggccagggccgggccgcctccatgccccgcctccctgcagagaac
cagaggagaaggggccggccacgtgggaataacctcagtaccatctcagacacaagcccc
atgaagcgttcagcctccgtgctgggccccaaggcccgacgcctggatgactactcactg
gagcgggtcccacccgaggagaaccagcggcaccaccagcggcgccgtgaccgcagccat
cgcacctctgagcgctccctgggccgctacactgacgtggacacaggcttggggacggac
ctgagcatgaccactcaatccggggacctgccgtcgaaggagcgggaccaggagcggggc
cggcccaaggatcggaagcatcgacagcaccaccaccaccaccaccaccaccaccctcca
ccccctgacaaggaccgctatgcccaggaacggccagaccacggccgggcgcgggcccgg
gaccagcgctggtcccgctcgcccagcgagggccgagagcacatggcgcaccggcagggc
agtagttccgtaagtggaagcccagccccctcaacatctggtaccagcactccgcggcgg
ggccgccgccagctcccccagaccccctccaccccccggccacacgtgtcctattcccct
gtgatccgtaaggccggcggctcgggtaccccgcagcagcagcagcagcaggcggtggcc
aggccgggccgggcggccaccagcggccctcggaggtacccaggccccacggccgagcct
ctggcgggagatcggccgcccacggggggccacagcagcggccgctcgcccaggatggag
cggcgggtcccaggcccggcccggagcgagtcccccagggcctgtcgccacggtggggcc
cggtggccggcatccggcccgcacgtgtccgaaggacccccggggccccggcaccacggc
tactatcggggctccgactacgacgaggccgatggcccgggcagcgggggcggcgaggag
gccatggccggggcctacgacgcgccaccccccgcacgacacgcgtcctcgggcgccacc
gggcgctcgcccaggactccccgggcctcgggcccggcctgcgcctcgccttcccggcac
ggccggcgactccccaacggctactacccggcgcacggactggccaggccccgcgggccg
ggctccaggaagggcctgcacgaaccctacagcgagagcgacgacgattggtgctaa
DBGET
integrated database retrieval system