Rhinopithecus roxellana (golden snub-nosed monkey): 104662016
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Entry
104662016 CDS
T03989
Symbol
TRPM1
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1 isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rro04040
]
104662016 (TRPM1)
Ion channels [BR:
rro04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104662016 (TRPM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
YVC1_C
LSDAT_prok
EBNA2_Core
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
104662016
NCBI-ProteinID:
XP_010361188
UniProt:
A0A2K6PFE1
LinkDB
All DBs
Position
5:123219530..123379166
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AA seq
1631 aa
AA seq
DB search
MSSFKRGSLKSSTSGSQKGQKSWIEKTFCKRECIFVIPSTKDANRCCCGQFTNQHIPPLP
SATPSKNEEENKQVETQPEKWSVAKHTQSYPTDSYGVLEFQGGGYSNKAMYIRVSYDTKP
DSLLHLMVKDWQLELPKLLISVHGGLQNFEMQPKLKQVFGKGLIKAAMTTGAWIFTGGVS
TGVISHVGDALKDHSSKSRGRVCAIGIAPWGIVENKEDLVGKDVTRVYQTMSNPLSKLSV
LNNSHTHFILADNGTLGKYGAEVKLRRLLEKHISLQKINTRLGQGVPLVGLVVEGGPNVV
SIVLEYLREEPPVPVVICDGSGRASDILSFAHKYCEEGGIINESLREQLLVTIQKTFNYN
KAQSHQLFAIIMECMKKKELVTVFRMGSEGQQDIEMAILTALLKGTNASAPDQLSLALAW
NRVDIARSQIFVFGPHWPPLGSLAPPTDSKATEKEKKPATTTTKGGRGKGKGKKKGKVKE
EAEEETDPRKIELLNWVNALEQAMLDALVLDRVDFVKLLIENGVNMQHFLTIPRLEELYN
TRLGPPNTLHLLVRDVKKSNLPPDYHISLIDIGLVLEYLMGGAYRCNYTRKNFRTLYNNL
FGPKRPKALKLLGMEDDEPPAKGKKKKKKKKEEEIDIDVDDPAVSRFQYPFHELMVWAVL
MKRQKMAVFLWQRGEESMAKALVACKLYKAMAHESSESDLVDDISQDLDNNSKDFGQLAL
ELLDQSYKHDEQIAMKLLTYELKNWSNSTCLKLAVAAKHRDFIAHTCSQMLLTDMWMGRL
RMRKNPGLKVIMGILLPPTILFLEFRTYDDFSYQTSKANEDGKEKEEENTDANADAGSRK
GDEENEHKKQRSIPIGTKICEFYNAPIVKFWFYTISYLGYLLLFNYVILVRMDGWPSLQE
WIVISYIVSLALEKIREILMSEPGKLSQKIKVWLQEYWNITDLVAISTFMIGAILRLQNQ
PYMGYGRVIYCVDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMLYFVVIMLVVLMSFG
VARQAILHPEEKPSWKLARNIFYMPYWMIYGEVFADQIDLYAMEINPPCGENLYDEEGKR
LPPCIPGAWLTPALMACYLLVANILLVNLLIAVFNNTFFEVKSISNQVWKFQRYQLIMTF
HDRPVLPPPMIILSHIYIIIMRLSGRCRKKREGDQEERDRGLKLFLSDEELKRLHEFEEQ
CVQEHFREKEDEQQSSSDERIRVTSERVENMSMRLEEINERETFMKTSLQTVDLRLAQLE
ELSNRMVNALENLVGIDRSDLIQARSRASSECEATYLLRQSSINSADGYSLYRYHFNGEE
LLFEDTSLSMSPGTGVRKKTCSFRIKEEKDGKTHLVPECQNSLHLSLGTSTSATPDGSHL
AADDLKNTEESKLGSDIGISKEDDERQTDSKKEETISPSLSKTDVIHGQDKSDVQNTQLT
VETTNIEGTISYPLEETKITRYYPDETFNACKTMKSRSFVYSRGRKLVSGVNQDIEYSSI
MDQQWTTEWQCQVQKITRSHSTDIPYIVSEAAVQAKHKEQFTDMEDEHHVTEAIPRIPRL
SLTITDRNGMENLLSVKPDQTLGFPSLRSKSLHGHPRNVKSVQGKLDRSGHASSVSSLVI
VSGMTAEEKNG
NT seq
4896 nt
NT seq
+upstream
nt +downstream
nt
atgagctccttcaagaggggctcactcaagagttctacatcggggtcacagaagggtcag
aaatcttggatagagaaaaccttttgcaaacgggaatgtatcttcgtaattcctagcaca
aaagacgctaacaggtgttgctgtggccagttcaccaaccagcatatcccccctctgcca
agtgcaacacccagcaaaaatgaagaggaaaacaaacaggtggagactcagcctgagaaa
tggtctgttgccaagcacacccagagctacccaacagattcctatggagttcttgaattc
cagggtggtggatactccaataaagccatgtatatccgtgtatcctatgacaccaagcca
gactcactactgcacctcatggtgaaagattggcagctggaactccccaagctcttaata
tctgtgcatggaggcctccagaactttgagatgcagcccaagctgaaacaagtctttggg
aaaggcctgatcaaggctgccatgaccaccggggcctggatcttcaccgggggagtcagc
acgggtgtcatcagccatgtaggggatgccttgaaagaccactcctccaagtccagaggc
cgggtttgtgctataggaattgctccatggggcatcgtggagaataaggaagacctggtt
ggaaaggatgtaacaagagtgtaccagaccatgtccaaccctctaagtaagctctctgtg
ctcaacaactcccacacccacttcatcctggctgacaatggcaccctgggcaagtatggc
gccgaggtgaagctgcgaaggctgctggaaaaacacatctccctgcagaagatcaacaca
agactggggcagggcgtgccccttgtgggcctcgtggtggaggggggccctaacgtggtg
tccatcgtcttggaatacctgcgagaagagcctcctgtccccgtggtgatttgtgatggc
agcggacgcgcctcggacatcctgtcctttgcgcacaagtactgtgaagaaggcggaata
ataaatgagtccctcagggagcaacttctagttaccattcagaaaacatttaattacaat
aaggcacaatcacatcagctgtttgcgattataatggagtgcatgaagaagaaagaactc
gtcactgtgttcagaatgggttctgagggccagcaggacatcgagatggcaattttaact
gccctgctgaaaggaacaaatgcatctgctccagatcagctgagcttggcactggcttgg
aatcgcgtggacatagcacgaagccagatctttgtcttcgggccccactggccgcccctg
ggaagcctggcacccccaacggacagcaaagccacagagaaggagaagaaaccagccacg
accaccaccaagggaggaagaggaaaagggaaaggcaagaagaaagggaaagtgaaagag
gaagcggaggaagaaactgatccccggaagatagagctgctgaactgggtgaatgctttg
gagcaagcgatgctggatgctttagtcttagatcgtgttgactttgtgaagctcctgatt
gaaaacggagtgaacatgcaacactttctgaccattccgaggctggaggagctgtataac
acaagactgggtccaccaaacacacttcatctgctggtgagggatgtgaaaaagagcaac
cttccaccggattaccacatcagcctcatagatatcgggctcgtgctggagtacctcatg
ggaggagcctaccgctgcaactacacccggaaaaactttcggactctttacaacaacttg
tttggaccaaaaaggcctaaagctcttaaacttctgggaatggaagatgatgagcctcca
gctaaagggaagaaaaagaaaaagaagaaaaaggaggaagagatcgacatcgatgtggat
gaccctgctgtgagtcggttccagtaccccttccacgagctgatggtgtgggctgtgctg
atgaaacgccagaaaatggcggtgttcctctggcagcgaggggaggagagcatggccaag
gccctggtggcctgcaagctctacaaggccatggcccacgagtcctccgagagtgatctg
gtggatgacatctcccaggacttggataacaattccaaagacttcggccagcttgctttg
gagttattagatcagtcctataagcacgacgagcagatcgccatgaaactcctgacctac
gagctgaaaaactggagcaactcgacctgcctcaaactggcggtggcagccaaacaccgg
gacttcatcgctcacacctgcagccagatgctgctgaccgacatgtggatgggaaggctg
cggatgcggaagaaccccggcctgaaggttatcatggggattcttcttccccccaccatc
ttgtttttggaatttcgcacctatgatgatttctcgtatcaaacatccaaggcaaatgag
gatggcaaagaaaaagaagaggagaatacggacgcaaatgcagatgctggctcaagaaag
ggggacgaggagaatgagcacaaaaaacagagaagtattcccattggaacaaagatctgt
gaattttataacgcgcccattgtcaagttctggttttacacaatatcatacttgggctac
ctgctgctgtttaactatgtcatcctggtgcggatggacggctggccctccctccaggag
tggattgtgatctcctacatcgtgagcctggcattagagaagatacgagagattctcatg
tcagaaccaggcaaactcagccagaaaatcaaagtttggcttcaggagtactggaacatc
acagatctcgtggccatttccacattcatgattggagcaattcttcgcctacagaaccag
ccctacatgggctatggccgggtgatctactgtgtggatatcatcttctggtacatccgt
gtcctggacatctttggtgtcaacaagtatctggggccatacgtgatgatgattggaaag
atgatgatcgacatgctgtactttgtggtcatcatgctggtcgtgctcatgagttttgga
gtagcccgtcaagccattctgcatccagaggagaagccttcttggaaactggcccgaaat
atcttctacatgccctactggatgatctatggagaggtgtttgcagaccagatagacctc
tacgccatggaaattaatcctccttgtggtgagaacctatatgatgaggaaggcaagcgg
cttcctccctgtatccccggtgcctggctcacgccagcactcatggcatgctacctactg
gtcgccaacatcctgctggtgaacctgctgattgctgtgttcaacaataccttctttgaa
gtaaaatcaatatccaaccaggtgtggaagttccagcgatatcagctgattatgacattt
catgacaggccagtcctgcccccaccgatgatcattttaagccacatctatatcatcatt
atgcgtctcagcggccgctgcaggaaaaagagagaaggggaccaagaggaacgggatcgt
ggattgaagctcttccttagcgacgaggagctgaagaggctgcacgagttcgaggagcag
tgtgtgcaggagcacttccgggagaaggaagacgagcagcagtcgtccagcgacgagcgc
atccgggtcacttctgagagagttgaaaatatgtcaatgaggttggaagaaatcaatgaa
agagaaacttttatgaaaacttccctgcagactgttgaccttcgacttgctcagctagaa
gaattatctaacagaatggtgaatgctcttgaaaatcttgtgggaatcgacaggtctgac
ctgatccaggcacggtcgcgggcttcctctgaatgtgaggcaacgtatcttctccggcaa
agcagcatcaatagcgctgatggctacagcttgtatcgatatcattttaatggagaagag
ttattgtttgaggatacatctctctccatgtcaccagggacaggagtcaggaaaaaaacc
tgttccttccgtataaaggaagagaaggatgggaaaacgcatctagtcccagaatgtcag
aacagccttcacctttcactgggcacaagcacatcagctaccccagatggcagtcacctt
gcagcagatgacttaaagaacactgaagagtcaaagttaggttcagatattgggatttca
aaggaagatgatgaaagacagacagactctaaaaaagaagaaactatttccccaagttta
agtaaaacagatgtgatacatggacaggacaaatcagacgttcaaaacactcagctaaca
gtggaaacgacaaatatagaaggcactatttcctatcccctggaagaaaccaaaattaca
cgttattaccccgatgaaacgttcaatgcttgtaaaacaatgaagtccagaagcttcgta
tactcccggggaagaaagctggtcagtggggttaaccaggatatagagtacagttcaatc
atggaccagcaatggacgacagaatggcaatgccaagttcaaaagatcacgcgctctcac
agcacagatattccttacattgtgtcggaagctgcagtgcaagccaagcataaagagcaa
tttacagatatggaagatgaacaccatgtcactgaagcaattcctcgaatccctcgcttg
tccctaaccattactgacagaaatgggatggaaaacttactgtctgtgaaacctgatcaa
actttgggattcccatctctcaggtcaaaaagtttacacggacatcctaggaatgtgaaa
tccgttcagggaaagttagacagatctggacatgccagtagtgtaagcagcttagtaatt
gtgtctggaatgacagcagaagaaaaaaacggttaa
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integrated database retrieval system
