Rhinopithecus roxellana (golden snub-nosed monkey): 104662033
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Entry
104662033 CDS
T03989
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104662033 (CHD1)
03036 Chromosome and associated proteins [BR:
rro03036
]
104662033 (CHD1)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104662033 (CHD1)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104662033 (CHD1)
SLIK complex
104662033 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
Motif
Other DBs
NCBI-GeneID:
104662033
NCBI-ProteinID:
XP_010361214
LinkDB
All DBs
Position
3:complement(30806518..30884251)
Genome browser
AA seq
1800 aa
AA seq
DB search
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLRKQQQQQQQQQQQHHQAS
SNSGSEEDSSSSEDSDDSSSEIKRKKHRDEDWQMSGSGSPSQSGSDSESEEERDKSSCDE
TESDYEPKNKVKSRKPQNRSKSKNGKKILGQKKRQIDSSEEDDEEDYDNDKRSSRRQATV
NVSYKEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVE
ADGDPNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQE
TKRWLKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPY
SECSWEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHEG
LELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVP
LSTLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQTKRLKFNILLTTYEILLK
DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEM
SALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQE
ALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSI
KGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSST
PFNKEELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQ
FKVANFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAK
QISFNGSEGRRSRSRRYSGSDSDSISEGKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSY
KKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDSSSGTERTGGRLGKVK
GPTFRISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDD
SNLLIGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLA
KKEALSGAGSSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDDKDEISSVKHP
NKKIKTERDSEEKPEPDVYIKKEPEEKREAKEKENKKELKREIKEKEDKKDIKEKDFKEK
RENKVKEAIQKEKDIKEEKLSESKSDGRERTKKSSVSDAPVHITASGEPVPISEESEELD
QKTFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNSDQNSNLNPHVIRNPDVERL
KENTNHDDSSRDSYSSDRHFTQYHDHHKDRHQGDSYKKSESRKRPYSSFSNGKDHRDWDH
YKQDSRYYGDREKHRKLDDHRSRDHRSNLEGNLKDRSHSDHRSHSDHRLHSDHRSSSEYT
HHKSSRDYRYHSDWQMDHRASSSGPRSPLDQRSPYGSRSPFEHSIEHKSTPEHTWSSRKT
NT seq
5403 nt
NT seq
+upstream
nt +downstream
nt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcaggctctggatctggttcgagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgactccggatctgaatcaggcagt
cagtcagagtctgagtcagacacttcccgagaaaacaaagttcaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagtcctagtattctggccgttcagagatctgca
atgctcaggaagcagcagcagcagcagcagcagcaacaacaacaacatcatcaagcctca
tctaatagcggatcagaagaggattcttccagcagtgaagattccgatgactcatcaagt
gagatcaaaaggaaaaagcatagagatgaagattggcaaatgtctgggtcaggatctcca
tctcagtctggttcagattcagaatctgaagaagagagagataaaagcagttgtgatgaa
acagaatctgattatgagccaaaaaacaaagtcaaaagcagaaaacctcaaaatagatct
aagtcaaaaaatggaaagaagattcttggacaaaaaaagagacagattgattcgtctgag
gaggatgatgaagaagattatgataatgacaaaagaagttctcgtcgccaagcaactgtt
aatgttagctataaggaggatgaagaaatgaaaacagattctgatgacctactggaagtc
tgtggagaggacgttcctcaacctgaggaagaggaatttgaaaccatagaaagatttatg
gattgtcggattgggagaaaaggagctactggtgctactacaaccatctatgcagttgaa
gcagatggtgacccaaatgcaggctttgaaaaaaacaaagaaccaggagagattcagtat
ttaattaaatggaaaggatggtcccatatccacaacacttgggagacggaagaaaccctc
aagcagcagaatgttagaggaatgaaaaaattggataattataagaaaaaagatcaggaa
acaaaaagatggttgaaaaatgcttctccagaagatgtggaatattataattgccagcaa
gaacttacagatgatctacataaacagtatcaaatagtggaacgtataattgctcattcc
aatcaaaagtcagcagctggttatcctgattattactgcaaatggcagggccttccatac
tcagagtgcagctgggaagatggagctcttatttccaaaaagtttcaagcgtgcattgat
gagtattttagcaggaaccaatcaaaaaccactccttttaaagattgcaaagtattaaaa
caaaggccaagatttgtagccctgaagaagcagccatcctatattggaggacatgagggc
ttagaattaagagattatcaactgaatggtttaaattggcttgctcattcttggtgcaaa
ggaaatagttgcatactcgctgatgaaatgggccttgggaaaacaatacagacgatctca
tttctgaattatttgttccatgaacatcaattatatggaccttttctattggtagtaccg
ctctccactcttacttcctggcaaagggaaattcagacatgggcttctcaaatgaatgct
gtggtttatttaggtgacattaacagcagaaacatgataagaactcatgaatggacacat
catcagaccaaacggttaaaatttaatatactgttaacaacttatgaaattttattaaag
gataaggcattccttggaggtctaaattgggcatttataggtgttgatgaagcacaccga
ttaaagaatgatgactcccttctgtataaaactttaatagattttaaatccaatcatcgt
ctccttatcactggaactcctctacagaattccctcaaagagctctggtctttgctacat
ttcattatgccagaaaagttttcttcctgggaagattttgaagaagaacatggcaaaggg
agagaatatggttatgcaagccttcacaaggagcttgagccatttctgttacgccgagtt
aagaaagatgtggaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatg
agtgctttacagaaacaatattacaaatggattttaactaggaattacaaagccctcagc
aaaggttccaagggcagtacctcaggctttttgaacattatgatggaactaaagaaatgt
tgtaaccattgctacctcattaaaccaccagataataatgaattctataataaacaggag
gccttacaacacttaattcgtagtagcggaaaattgattcttcttgacaagctattaatt
cgcctaagagaacgaggcaatcgagttcttattttttcgcaaatggtgcggatgttagat
atacttgcagaatatttgaaatatcgtcaatttccctttcaaagattagatggatcaata
aaaggagaactgaggaaacaagctctggatcattttaatgctgagggatcagaggatttt
tgctttttgctgtctacaagagctggaggtctagggattaatttagcctctgccgacact
gttgttatatttgattctgattggaatccacagaatgatcttcaggcacaggctagagcc
catcgaattgggcaaaagaaacaggtgaatatttatcgtctagttacaaagggatcagtt
gaagaagatattcttgaaagggccaaaaagaagatggttttagatcatcttgtaattcaa
agaatggacacaactgggaagacagtactacatacaggttctgccccatcaagttctact
cctttcaataaagaagagttatcagccattttaaagtttggtgctgaggaactttttaag
gaacctgaaggagaagaacaagagccccaggaaatggatatagatgaaatcttgaagagg
gcggaaactcatgaaaatgaaccaggtcctttaactgtaggagatgagttgctttcccag
ttcaaggttgccaacttctcaaatatggatgaggatgacattgagttggaacctgaaaga
aattcaaagaattgggaggaaattattccagaagatcagagaagacgattagaagaagaa
gaaagacaaaaggaacttgaagaaatttatatgctcccaagaatgagaaattgtgcaaaa
cagattagtttcaatggaagtgaagggaggcgcagtagaagtaggagatactctggatct
gatagtgattccatctcagaagggaaaaggccaaagaaacggggaagaccacggactatt
cctcgcgagaatattaaaggatttagtgatgcggaaattaggcggtttatcaagagctat
aagaaatttggtggtcctctggaaagattagatgcaattgctcgagatgctgaattagtt
gataagtcggaaacagaccttagacgactgggagaattggtacataatggttgcattaaa
gctttaaaggatagttcttcaggaacagaacgaacaggtggtagactcggaaaagtgaag
ggtccaacattccgaatatcaggagtacaggtgaatgccaagctagtcatctcccatgaa
gaagaattaatacctttgcacaaatccattccttctgatccagaagaaagaaagcagtat
actatcccatgccacacaaaggcagctcattttgatatagactggggcaaagaagatgat
tccaatttgttaattggcatctatgaatatggatatggaagctgggaaatgattaaaatg
gatcctgacctcagtctaacacacaagattcttccagatgatcctgataaaaaaccgcaa
gcaaaacagttgcagacccgtgcagactacctcatcaaattacttagtagagatcttgca
aaaaaagaagctctttctggtgcgggaagttcaaagaggagaaaagcaagagctaagaag
aataaagcaatgaagtctataaaagtgaaagaggaaataaagagtgattcttctcctttg
ccttcagagaagtctgatgaagatgatgataaagatgagatcagttctgtgaaacatcca
aataaaaaaattaaaacagaaagagacagtgaagaaaaacctgagccagatgtttatata
aagaaggaaccagaagaaaagagggaagcaaaagaaaaggagaataaaaaagaacttaaa
agggagataaaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaa
agagaaaacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttg
agcgaatccaagtctgatggtagggaaagaaccaagaaatcttcagtgtcagatgctcca
gttcatatcacggcaagtggtgaaccagttcccatttctgaagaatctgaagagctggat
cagaagacattcagcatttgtaaagaaagaatgaggcctgttaaagcagctttgaaacaa
cttgataggcctgagaaaggcctttcagaaagagaacaactagaacatactagacaatgt
ttaataaaaattggagaccatatcacagaatgtctaaaagagtatacaaatcctgaacaa
attaagcaatggagaaaaaacctatggatttttgtatctaagttcactgaatttgatgca
agaaaattacataaattatataagcatgctattaaaaaacggcaggaatctcagcaaaac
agtgatcaaaacagcaacttgaatcctcatgtgattagaaatccagatgtggaaagatta
aaagagaatacaaatcacgatgatagcagcagggacagttattcctctgatagacacttc
actcagtaccatgatcatcataaagaccgacatcagggagattcttacaaaaaaagtgaa
tccaggaaaagaccctattcttcttttagtaatggtaaagaccatcgtgattgggatcac
tacaagcaagacagcagatattacggtgacagagagaaacacagaaaactggatgatcac
aggagtagagatcacaggtcaaatttggaaggaaatttaaaagatagatctcattctgat
catcgttctcattcagatcatcggttacattcagaccaccgatcaagttctgaatatacg
caccataaatcttccagggattataggtatcactcagattggcaaatggaccacagagct
tccagcagtggccctaggtcaccactagatcagagatctccttatggctccagatctcca
tttgaacattcaattgaacacaaaagtacaccggagcatacctggagtagtcggaaaaca
taa
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integrated database retrieval system
