Rhinopithecus roxellana (golden snub-nosed monkey): 104663162
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Entry
104663162 CDS
T03989
Symbol
MSH6
Name
(RefSeq) DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro01524
Platinum drug resistance
rro03430
Mismatch repair
rro05200
Pathways in cancer
rro05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
104663162 (MSH6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104663162 (MSH6)
09162 Cancer: specific types
05210 Colorectal cancer
104663162 (MSH6)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
104663162 (MSH6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rro03400
]
104663162 (MSH6)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
104663162 (MSH6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
HORMA
MUM1-like_PWWP
UPF0524
Motif
Other DBs
NCBI-GeneID:
104663162
NCBI-ProteinID:
XP_030776501
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All DBs
Position
17:complement(99999374..100026814)
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AA seq
1360 aa
AA seq
DB search
MSRQSTLYSFFPKSPALSDANKASARASREGGRAAAAPGASPSLGENAAWSEAGPGPRPS
ARSASPPKAKNLNGGLRRSAAPAAPTSCDFSPGDLVWAKMEGYPWWPCLVYNHPFDGTFI
REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQKGGHFYSAKPEILRAMQRAD
EALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDKSEEDNEIESEEEVQPKTQGSRR
SSRQIKKRRVISDSESDIGGSDVEFKPDTKEEGSSDEISSGMGDSESEGPNSPVKVARKR
KRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSESQAHVSGGGDDSS
RPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTPGMRKWWQIKSQN
FDLVICYKVGKFYELYHMDALIGVSELGLVFMKGNWAHSGFPEIAFGRYSDSLVQKGYKV
ARVEQTETPEMMEARCRKMAHISKYDRVVRREICRIITKGTQTYSVLEGDPSENYSKYLL
SLKEKEEDSSGHTRAYGVCFVDTSLGKFFIGQFSDDRHCSRFRTLVAHYPPVQVLFEKGN
LSKETKTILKSSLSSSLQEGLIPGSQFWDASKTLRTLLEEGYFREKLSDDIGVTLPQVLK
GMTSESDSIGLTPGEKSELALSALGGCIFYLKKCLIDQELLSMANFEEYIPLDSDIVSTT
RSGAIFTKAYQRMVLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCA
PLCSPYAINDRLDAIEDLMVVPDKISEVVELLKKLPDLERLLSKIHNVGSPLKSQNHPDS
RAIMYEETTYSKKKIIDFLSALEGFKVMCKIIGIMEEVIDDFKSKILKQVISLQTKNPEG
RFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLEKQRN
RIGCRTIVYWGIGRNRYQLEIPENFTTRNLPEEYELKSTKKGCKRYWTKTIEKKLANLIN
AEERRDVSLKDCMRRLFYNFDKNYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVIL
LPEDTPPFLELKGSRHPCITKTFFGDDFIPNDILIGCEEEEQENGKASCVLVTGPNMGGK
STLMRQAGLLAVMAQMGCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASI
LTHATAHSLVLVDELGRGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNV
AVRLGHMACMVENECEDPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKA
REFEKMNQSLRLFREVCLASERSTVDAEAVHKLLTLIKEL
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgacagagcaccctgtacagcttcttccccaagtctccggcgctgagtgatgcc
aacaaggcctcggccagggcctctcgcgaaggcggccgtgccgccgctgcccccggggcc
tctccttccctaggcgagaatgcggcctggagtgaggctgggcctgggcccaggccctcg
gcgcgctccgcgtcgcctcctaaggcgaagaacctcaacggagggctgcggagatccgca
gcgcctgcggcccccaccagttgtgacttctcaccaggagatttggtttgggccaagatg
gagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattcatc
cgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacagcccaacacgg
ggctgggttagcaaaagacttttaaagccatatacaggttcaaaatcaaaggaagcccag
aagggaggtcatttttacagtgcaaagcctgaaatactgagagcaatgcaacgtgcagat
gaagccttaaataaagacaagattaagaggcttgaattggcagtttgtgatgagccctca
gagccagaagaggaagaagagatggaggtaggcacaacttatgtaacagataagagtgaa
gaagataatgaaattgagagtgaagaggaagtacagcctaagacacaaggatctaggcga
agtagccgccaaataaaaaaacgaagggtcatatcagactctgagagtgacattggtggc
tctgatgtggaatttaagccagacactaaggaggaaggaagcagtgatgaaataagcagt
ggaatgggggatagtgagagtgaaggcccgaacagccctgtcaaagttgctcgaaagcgg
aagagagtggtcactggaaatggctctcttaaaaggaaaagttctaggaaggaaatgccc
tcagctaccaaacgagcaactggcatttcatcagaaaccaagaatactttgagtgctttc
tctgcccctcaaaattctgaatcccaagcccacgtaagtggaggtggtgatgacagtagt
cgccctactgtttggtatcatgaaactttagaatggcttaaggaggaaaagagaagagat
gagcacaggaggcggcctgatcaccccgattttaatgcatctacactctatgtgcctgag
gatttcctcaattcctgtactcctgggatgaggaagtggtggcagattaagtctcagaac
tttgatcttgtcatctgttacaaggtggggaaattttatgaactgtaccacatggatgct
ctgattggagtcagtgaactggggctggtattcatgaaaggcaactgggcccattctggc
tttcctgaaattgcatttggccgttattcggactccttggtgcagaagggctataaagta
gcacgagtggaacagactgagactccagaaatgatggaggcacgatgccgaaagatggca
catatatccaagtatgatagagtggtgaggagggagatctgtaggatcattaccaagggt
acacagacttacagtgtgctggaaggtgatccctctgagaactacagtaagtatcttctt
agcctcaaagaaaaagaggaagattcttctggccatactcgtgcatatggtgtgtgcttt
gttgatacttcactgggaaagtttttcataggtcagttttcagatgatcgccattgttcg
agatttaggactctagtggcacactatcccccagtacaagtcttatttgaaaaaggaaat
ctctcaaaggaaacgaaaacaattctaaagagttcattgtcctcttctcttcaggaaggt
ctgatacctggctcccagttttgggatgcatccaaaactttgagaactctccttgaggaa
ggatattttagggaaaagctaagtgatgacattggggtgacgttaccccaggtgcttaaa
ggtatgacttcagagtctgattccattgggttgacaccaggagagaaaagtgaattggcc
ctctctgctctaggtggttgtatcttctacctcaaaaaatgccttattgatcaggagctt
ttatcaatggctaattttgaagaatatattcccttggattctgacatagtcagcactaca
agatctggtgctatcttcaccaaagcctatcaacgaatggtgctagatgcagtgacatta
aacaacttggagatttttctgaatggaacaaatggttctactgaaggaaccctgctagag
agggttgatacttgccatactcccttcggtaagcggctcctaaagcaatggctttgtgcc
ccactctgtagcccttatgctatcaatgatcgtctagatgccatagaagacctcatggtt
gtgcctgacaaaatctccgaagttgtagagcttctaaagaagcttccagatcttgagaga
ctactcagtaaaattcataatgttgggtctcccttgaagagtcagaaccatccagatagc
agggctataatgtatgaagaaactacatacagcaaaaaaaagatcattgattttctttct
gctctggaaggattcaaagtaatgtgtaaaattatagggatcatggaagaagtcattgat
gattttaagtctaaaatccttaagcaggtcatctctctgcagacaaaaaatcctgaaggc
cgttttcctgatttgactacagaactgaaccgatgggatacagcctttgaccatgaaaag
gctcgaaagactggacttattactcccaaagcaggctttgactctgattatgaccaagct
cttgctgacataagagaaaatgaacagagcctcctggaatacctagagaaacagcgcaac
agaattggctgtaggaccatagtctattgggggattggtaggaaccgttaccagttggaa
attcctgagaatttcaccactcgcaatttgccagaagaatacgaattgaaatctaccaag
aagggctgtaaacgatactggaccaaaactattgagaagaagttggctaatctcataaat
gctgaagaacggagagatgtatcattgaaggactgcatgcggcgactgttctataacttt
gataaaaattacaaggactggcagtctgctgtagagtgtatcgcagtgttggacgtctta
ctgtgcctggctaactacagtcgagggggtgatggtcctatgtgtcgcccagtaattctg
ttgccagaagatactccccccttcttagagcttaaaggatcacgccatccttgcattacg
aagactttttttggagatgattttattcctaatgacattctaataggctgtgaggaagag
gagcaggaaaatggcaaagcctcttgtgtgcttgttactggaccaaatatggggggcaag
tctacactcatgagacaggctggcttattagctgtaatggcccagatgggttgttacgtc
cccgctgaagtgtgcaggctcacaccaattgatagagtgtttactagacttggtgcctca
gatagaataatgtcaggtgaaagtacattttttgttgaattaagtgaaactgccagcata
cttacgcatgcaacagcacattctctggtgcttgtggatgaattaggaagaggtactgca
acatttgatgggacagcaatagcaaatgcagttgttaaagaacttgctgagactataaaa
tgtcgtacattattttcaactcactaccattcactagtagaagattattctcaaaatgtt
gctgtgcgcttaggacatatggcatgcatggtagaaaatgaatgtgaagaccccagccag
gagactattaccttcctctataaattcattaagggagcttgtcctaaaagctatggcttt
aatgcagcaaggcttgctaatctcccagaggaagttattcaaaagggacatagaaaagca
agagaatttgagaagatgaatcagtctctacgattatttcgggaagtttgcctggctagt
gaaaggtcaactgtagatgctgaagctgtccataaattgctgactttgattaaggaatta
tag
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integrated database retrieval system
