Rhinopithecus roxellana (golden snub-nosed monkey): 104663318
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Entry
104663318 CDS
T03989
Symbol
VPS13A
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 13A
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rro04131
]
104663318 (VPS13A)
Membrane trafficking [BR:
rro04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
104663318 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
104663318
NCBI-ProteinID:
XP_030775555
LinkDB
All DBs
Position
16:complement(42061159..42318441)
Genome browser
AA seq
3174 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVDLDTSQLSLGIWKGAVALKNLQIKENALSQLDVPFKVKVG
HIGNLKLIIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPLKEEKQLMEAKQQELKRIEE
AKQKVVDQEQHLPEKQDTFAEKLVTQIIKNLQVKISSIHIRYEDDITNRIKPLSFGISLQ
NLSMQTTDQYWVPCLHDETEKLVRKLIRLDNLFAYWNVKSQMFYLNDYDDSLDDLRNGIV
NENIVPEGYDFVFRPISANAKLVMNRRSDFDFSAPKINLDVELHNIAIEFNKPQYFSIME
LLESVDMMTQNMPYRKFRPDVPLHHHAREWWAYAIHGVLEVNVCPRLRMWSWKHIRKHRG
KMKQYKELYKKKLTSKKPPGELLVSLEELEKTLDVLNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNKGWFSWLWSWSEQNTNEQQPDVKPGILEEMLTPEEKALLYEAIGYSETAVDPT
LPKTFEALKFFVHLKSMSVVLRENHQKPELIDIVIEEFSTLIVQRPGAQAVKFETKIDSF
HITGLPDNSEKPRLLSSLDDAMSLFQITFEINPLDETVAQRCIIEAEPLEIIYDARTVNS
IVEFFRPPKEVHLAQLTSATLTKLEEFRNKTATGLLYIIETQKVLDLRINLKASYIIVPQ
DGIFSPTSNLLLLDLGHLKVTSKSRSELPDVKQGEANLKEIMDIAYDSFDIQLTSIQLLY
SRVGDNWREARKLNVSTQHILVPMHFNLELSKAMVFMDVRMPKFKIFGKLPLISLRISDK
KLQGIMELVESIPKPEPVTEVSAPVKSFQIQTSTSLGTSQISQKIIPLLELPSVSEDDSE
EEFFDAPCSPLEEPLQFPTGVKSIRTRKLQKQDCSVNVTTFKIRFEVPKVLIEFYHLVGD
CELSVVEIHVLGLGTEIDIRTYDLKANAFLKEFCLKCPEYLDENRKPVYLVTTLDNTMED
LLTLEYVKAEKNVPNLKSTYNNVLQLIKVNFSSLDIHLHTEALLNTINYLHNILPQSEEK
SAPVSSTETEDKGDVIKKLALKLSTNEDIITLQILAELSCLQIFIQDQKRNISEIKIEGL
DSEMIMRPSETEINAKLRNIIVLDSDITAVYKKAVYITGKEVFSFKMVSYMDATAGSAYT
DMNVVDIQVNLVVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATVQAAGMAATGVKEL
ARRSSRMALDINIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMITESQSSPPPVIDLI
TIKLSEMRLYRSQFINDAYQEVLDLLLPLNLEVVVERNLCWEWYQEVPCFNVNAQLKPME
FILSQEDITTIFKTLHGNIWYEKDGSASPAVTKDQYIATSGVTTNASHHSGGATVVTAAV
VEVHSRASLVKTTLNMSFKTDYLTMVLYSPGPKQASFTDVRDPSLKLAEFKLENIISTLK
MYTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDIKYRKVRDGCVTDA
VFQEMYICASVEFLQTVANVFLEAYTTGTAVETSVQTWTAKEEVPTQESEKWEINVIIKN
PEIVFVADMTKNDAPALVITTQCEVCYKGNLENSTMTAAIKDLQVRACPFLPVKRKGKVT
TVLQPCDLFYQTTQTGTDPQVIDMSVKSLTLKVSPVIINTMITITSALYTTKETIPEETA
SSTAHLWEKKDTKTLKMWFLEESNETEKIAPTTELVPKGEMIKMNIDSIFIVLEAGIGHR
TVPMLLAKSRFSGEGKNWSSLINLHCQLELEVHYFNEMFGVWEPLLEPLEIDQTEDFRPW
NLGIKMKKKAKKAIVESDPEEENYKVPEYKTVISFHSKDQLNITLSKCGLVMLNNLVKAF
TEAATGSSADFVKDLAPFIILNSLGLTISVSPSDSFSVLNIPMAKSYVLKNEESLSMDYV
RTKDNDHFNAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQ
IDTVEGSKKVTIRSPVQIRNHFSVPLSVYEGDTLLGTASPENEFNIPLGSYRSFLFLKPE
DEDYQMCEGIDFEEIVKNDGALLKKKCRSKNPSKQSFVVNIVPEKDNLTSLSVYSEDGWD
LPYIIHLWPPILLRNLLPYKIAYYIEGIENSVFTLSEGHSAQICTVQLDKARLHLKLLDY
LNHNWTSEYHIKPNQQDISFVSFTCVTEMEKTDLDIAVHMTYNTGQTVVAFHSPYWMVNK
TGRMLQYKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSH
GAVKCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYRISVAEEGTDKWLSLDL
EQCIPFWPEDASSKLLIQVEGSEDPPKRIYFNKQENCILLRLDNELGGIIAEVNLAEHST
VITFLDYHDGAATFLLINHTKNELVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRRLKW
RCRKSHGEVTQKDDMMMPIDXGEKTIYLVSFFEGLQRIILFTEDPKVFKVTYESEKAELA
EQEIAVALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWKPMSVKHTEKLERE
FKEYTESSPSEDKVIELDTNIPVRLTPTGHNMKILQPRVIALRRNYLPALKVEYNTSAHQ
SSFRIQIYRIQIQNQIHGAVFPFVFYPVKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISR
IKYFKVLIQEMDLRLDLGFIYALTDLMTEAEVTENTEVELFHKDIEAFKEEYKTASLVDQ
SQVSLYEYFHISPLKLHLSVSLSSGGEEAKDSKQNGGLIPVHSLNLLLKSIGATLTDVQD
VVFKLAFFELNYQFHTTSDLQSEVLRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGV
EAFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITGAMAKGVAAMTMDED
YQQKRREAMNKQPAGFREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGK
GLVGAVARPTGGIIDMASSTFQGIKRATETSEVESLRPPRFFNEDGVIRPYRLRDGTGNQ
MLQVMENGRFAKYKYFTHVMINKTDMLMITRCGVLFVTKGTFGQLTCEWQYSFDEFTKEP
FIVHGRRLRIEAKERVKSVFHAREFGKIINFKTPEDARWILTKLEEAREPSPSL
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgagtcggtggtcgtggacgtgttaaaccggttcttgggggactatgtggtg
gacctggacacgtcccagctctctctgggcatctggaaaggagctgtggccctcaagaat
cttcagattaaagaaaatgccctgagtcaactggatgtaccatttaaagttaaagttggt
cacataggtaatcttaaacttataattccatggaaaaacctttatactcaacctgttgaa
gctgtattggaagaaatttatttactcatagtgccttcttctagaataaaatatgatcct
ttaaaagaagagaaacaactcatggaagcaaagcaacaggaactgaaaagaatagaagaa
gcaaaacaaaaagtagttgatcaagaacaacatctgccggaaaaacaggacacttttgca
gaaaaattagttacacagatcataaaaaatcttcaagtgaaaatttccagtatccatatt
cgttatgaagatgatatcacaaatcggatcaaaccgctgtcatttggtatttcccttcag
aatctcagcatgcagacaactgatcaatactgggttccatgtttacatgatgaaactgag
aaactagttcgtaagttaatccgattggataacctttttgcctattggaatgtgaagtct
cagatgttttatcttaatgattatgatgactccttggatgacttgaggaatggcattgtc
aatgaaaatattgttccagaaggttatgattttgtatttcgtcccatatctgctaatgcc
aaacttgtgatgaatcgccgatctgattttgacttttctgcccccaaaataaacttggat
gttgagttacataacatagcaattgaatttaataaaccacagtatttcagtattatggag
cttcttgaatcagttgatatgatgacacaaaatatgccatataggaagttcagacctgac
gtgcctcttcaccaccatgccagagaatggtgggcttatgctatacatggtgttcttgaa
gtaaatgtttgccccaggttacggatgtggtcatggaagcatattagaaaacatagggga
aaaatgaagcaatataaagaactgtataaaaaaaagttaacaagtaagaagccacctggt
gaacttctcgtgtctttggaggagttggaaaaaaccttggatgtccttaatataactata
gctagacaacaggcagaagttgaggtaaagaaagctggatacaaaatttacaaagaagga
gtaaaagatccagaggataataaagggtggtttagctggctatggtcttggtcagaacaa
aatactaatgaacagcaaccagatgttaaacctggaattcttgaagaaatgttgacacct
gaagaaaaagctttactctatgaagcaattggctatagtgaaacagcagttgatccaact
ttgccaaaaacatttgaagccttgaagttttttgtccacttgaaaagtatgtctgttgtt
ctaagagaaaatcatcaaaaacctgagctgatagatattgtaatagaagaatttagcacc
ttaattgtgcaaagaccaggagcgcaagcagtaaaatttgaaactaaaatagattcattt
catattactggcttaccagataattcagaaaaaccccgcctcctgtcttcattggatgat
gcaatgtcactcttccaaattacatttgagataaatccattagatgaaactgttgctcag
aggtgtatcatagaagctgaacctttagaaatcatatatgatgcaaggacagtgaatagt
atagtggaattcttcagacctccaaaagaggtacatctagcacagctcacttcagcaact
ttgacaaaactggaagaatttcgcaataagacagcaacaggtctactgtatattattgaa
acgcagaaagttcttgatctcagaattaatttgaaggcttcatatattattgtcccacaa
gatggaatttttagtcctacatcaaatctgcttcttttggaccttggtcatcttaaggtg
acaagtaaaagtcgttctgaattaccagatgtgaaacaaggtgaggccaatcttaaagag
ataatggatatagcttatgattcctttgatattcaacttacaagcatacagctgctttac
agtagagttggtgataattggagagaagcacgaaaactcaatgtatctacccagcatatt
ttggtacccatgcacttcaatttggaactgtctaaggccatggttttcatggatgtaagg
atgcccaaattcaagatttttggaaagttacctcttatttctttacggatctcagataaa
aaactacaagggattatggaattggttgaaagcattccaaaacctgaaccagtaactgaa
gtatctgcccctgtcaaatcattccagattcaaacatctacttctttgggaacatcacag
atttcacagaaaataattcctctcttggaacttccgtctgtttctgaagatgattcagag
gaggaattttttgatgcaccatgtagtcccttggaagaacctcttcagttcccaactgga
gttaaaagtattcgaaccagaaagttacaaaagcaggattgttcagtaaatgtgactacg
tttaaaatacgatttgaagtaccaaaggttttgatcgagttttatcaccttgttggagat
tgtgaactatctgtggtagaaattcatgttttaggattgggcacagaaattgacattaga
acatacgatttgaaagcaaatgccttcttgaaagagttctgcttaaaatgcccagaatac
ttggatgaaaacaggaaaccagtttatttggttacaaccctggataacacaatggaagac
ctgttaacgctggaatatgtaaaggctgaaaagaatgtacccaacttgaaaagtacctat
aacaatgttttacaattgattaaggtaaatttttcctctttggatattcatttacacact
gaagcacttctgaatacaataaattatcttcataatatccttccgcaatcagaggaaaaa
tcagccccagtgtcctctacagagactgaagacaaaggagatgtcattaaaaaattagct
ttaaaactatccacgaatgaagatatcattactttgcagattttagcagaattatcgtgt
ttacagatctttattcaagatcagaaacgtaacatttctgaaattaagattgaagggctt
gattctgagatgattatgaggccttcagaaactgaaataaatgcaaagctaaggaatata
attgttttagattctgatataacagctgtatacaaaaaggctgtttatatcactggaaaa
gaagttttcagcttcaaaatggtttcttacatggatgcaactgctggttctgcatacacg
gatatgaatgtggttgacattcaggttaatttagtagttggttgcattgaagtagttttt
gtcacaaaatttctatattctatattggcttttatagataattttcaggcagctaaacaa
gccttggctgaggcaactgttcaggcagctggaatggctgctactggtgtaaaagaactg
gcacgaaggagttccagaatggcactggatattaacatcaaagccccagttgtggtcatc
ccgcagtctccagtttctgaaaatgtttttgttgctgattttgggctaattacaatgaca
aatacctttcatatgataacagagagccagagctctcccccacctgttattgatttgata
acaataaagctgagtgaaatgcgactatacagatctcagtttattaatgatgcataccag
gaagtactggatctactactgccattaaatctggaggtggtggttgaacgaaatttatgc
tgggagtggtaccaggaagttccttgttttaacgtaaatgctcagctgaaaccaatggag
ttcattcttagtcaagaagatataacaactatttttaaaacattgcatggcaatatatgg
tatgaaaaagatggtagtgcctcacctgctgtaacaaaagaccaatacattgccactagt
ggagttactactaatgcttcacaccattcaggaggagcaactgtggtgacagctgccgtg
gtagaagtacattcacgtgcctccctagttaagacaacactgaacatgagcttcaaaact
gattatctcaccatggtgctgtatagtccaggtcctaaacaagcttcctttacagatgtt
cgggatccttctctgaaacttgctgaatttaaattggagaatattataagtactttaaaa
atgtatacagatgactcaacattttcttccttctcattaaaaaactgtattttagatgat
aaaaggcctcatgtcaagaaagcaactcctcgaatgataggactgactgttggttttgac
aaaaaagacatgatggatataaagtacaggaaagtcagagatggctgtgtgactgatgca
gtctttcaagaaatgtatatttgtgcaagtgtagaatttctgcagactgttgcaaatgtc
tttcttgaggcctacaccacaggcactgctgtagaaaccagtgtgcaaacatggactgct
aaggaagaagtacctacgcaggaatcagagaagtgggaaattaatgttattattaaaaat
cctgaaattgtgtttgtggctgacatgacaaaaaatgatgctcctgccttagtcattaca
acacaatgtgaagtttgctataaaggtaaccttgaaaatagcacaatgactgctgctatt
aaagatctccaagtgagagcctgcccgtttcttccagtcaagagaaaaggcaaagtcact
actgttttgcagccctgtgacttgttttatcaaactactcagacaggtacagatccacaa
gtgatcgatatgtcagtaaaatccctgacactaaaggtttcaccagttattataaatact
atgattaccataacttcagcactgtatacaactaaggaaaccatcccagaagaaacagct
tcttctactgcacatttatgggaaaagaaggatacaaagactttaaaaatgtggtttctt
gaagaatcaaatgaaactgaaaaaatagctcccacaactgaattggtacccaaaggcgag
atgataaaaatgaacattgattctatttttatagttcttgaggctggaattggtcataga
acagtgcctatgcttctggcaaagtcacgtttttcaggggaaggcaaaaactggagttcc
ctaataaatctgcactgtcagcttgagctagaagtgcattattttaatgaaatgtttggt
gtatgggagcctttgcttgaacccttagaaattgatcagactgaggattttagaccatgg
aatcttggtatcaagatgaaaaagaaagccaaaaaggccattgttgagtcagatcctgaa
gaagaaaactacaaagtgccagaatataaaactgtcattagtttccattcaaaagaccaa
ttaaacattacattatccaaatgtggtcttgtgatgttaaataatttagtcaaggcattt
acagaagctgccactggatcttcagctgacttcgtaaaggatctagcaccatttataatt
ttaaattcccttggacttactatctctgtttcgccaagtgattctttcagtgtactcaac
attcctatggcaaaatcatatgtattgaaaaatgaagaaagtttaagtatggattatgtc
cgaaccaaggacaatgatcatttcaatgcaatgactagcctaagcagcaaactcttcttc
attcttcttacacctgttaaccattctactgctgataagattcctttaacaaaagtggga
cgacgtctgtacactgtaagacacagagagtctggagttgaaagatctattgtttgtcaa
attgatacagtggaaggaagtaagaaggtcacaattcgctccccagtgcagataagaaat
catttttcagtcccactgtctgtttacgaaggggataccttattgggaactgcctcacct
gaaaatgaattcaacataccattaggatcttaccgatcattcctttttctgaagccagaa
gatgaggactatcaaatgtgtgaaggaattgactttgaagagattgtgaaaaatgatggt
gctcttctaaagaagaaatgtagatctaaaaacccttctaagcagtcatttgtcgttaat
attgttccagaaaaagataatttaacatctctatcagtgtattcagaagatggttgggat
ttaccatacataatacatttgtggccacctatcctgctccgaaatcttcttccttacaaa
attgcttattatatagagggaattgaaaattcggtttttactctaagtgaaggacattca
gcccagatttgtactgtacagttggataaagccaggctacatttaaaattacttgactat
ctcaatcacaattggacaagtgaatatcacataaagcctaatcagcaagacattagtttt
gtcagttttacctgtgttacagaaatggaaaagactgatttagatattgctgtccatatg
acttataatactggtcagacagttgtggcatttcatagtccttattggatggtcaacaaa
actggtcgcatgttacagtacaaagcagatggaattcatcgaaagcatccacctaattat
aaaaagccagttctcttttcttttcagccaaatcacttttttaataacaataaggttcaa
cttatggtaactgatagtgaattgtccgatcagttttcaattgatactgttggtagtcat
ggagctgttaaatgtaaaggtctgaaaatggactatcaagttggtgtcactatagacctg
agcagttttaacattactagaattgtgacatttacccctttttatatgattaaaaacaaa
agcaaataccgtatatcagtggctgaagaaggaactgataaatggctctctcttgatttg
gagcagtgtatccccttttggcctgaggatgcttctagtaaacttcttattcaagttgaa
gggagtgaagatcctcccaaaaggatatattttaacaagcaagaaaattgtattctattg
cgtctggataacgagcttggaggtattatagcagaagtgaatttggccgagcattctaca
gttattacatttttagattatcatgatggagcagctacattcctcttaataaatcacaca
aagaatgaacttgttcaatacaatcaaagttctctcagtgagatagaagattccctccct
cctggaaaagcagtgttttatacatgggctgatccggtgggctctagaaggctgaagtgg
agatgtagaaaaagccatggtgaagtaacacaaaaggatgatatgatgatgcctatagat
nttggggaaaagacaatttatttagtttcattctttgaaggtttacaacgcattatttta
ttcactgaagatccaaaggtatttaaagtaacatatgaaagtgagaaagcagagttagca
gagcaagaaattgcagtggcattacaagatgttggaatttctcttgtcaacaattacacg
aagcaagaagtagcctatataggcatcacaagttctgatgtggtttgggagacaaagccc
aagaagaaggcaagatggaagccaatgagtgtaaagcacactgagaagttagagagagaa
tttaaggaatatactgaatcttcaccttcagaagataaggttattgagttggacactaac
attccggttcgcttaacacctactggtcataacatgaaaattctgcagccacgtgtaata
gctctacgaagaaattatcttccagcattaaaagtggaatataacacatctgcacatcaa
tcatcatttagaattcaaatctacagaatacagatccaaaatcagatacatggtgctgtg
tttccctttgtgttttaccctgttaaacctccaaagtcggtcaccatggattcagcacca
aagccctttacagatgtcagtattgtcatgagatctgcaggacattcccagatatcacgt
attaagtatttcaaagtattgattcaagaaatggatctcaggttagatcttgggtttatc
tatgctttaacagaccttatgacagaagctgaggtaactgaaaatacagaggttgagctt
tttcataaagatatagaagctttcaaagaagaatataaaacagcctcattagtagatcaa
tcacaagtcagcctctatgaatattttcatatatctcctctcaagttacatttaagtgtt
tcactgagttcgggcggagaagaagctaaagattcaaaacaaaatggaggactgattcca
gttcattctttaaatcttttgctgaagagtattggtgccacactgacagatgtacaagat
gtagtttttaagcttgcattttttgaactcaactatcagttccatacaacatccgaccta
cagtctgaagtcctaagacactattcaaaacaggccattaagcagatgtatgtactcatt
cttggacttgatgttttgggaaatccatttggcttaattagagaattttctgaaggtgta
gaagcattcttttatgaaccttaccagggagccatccagggtcctgaagagtttgtggag
ggaatggcactaggacttaaggcactagttggtggagctgttggtggattagcgggtgct
gcctccaaaatcaccggtgctatggctaaaggggtagcagctatgactatggatgaagac
taccaacagaagagaagagaagccatgaataagcaaccagctggttttagagaaggcatc
actcgtggaggaaaaggcttagtttctggatttgttagtggcataacaggaattgttaca
aaaccaatcaaaggcgctcaaaaagaaggagcagctggtttctttaaaggtgttgggaaa
ggtttagtgggagcagtagcaaggccaactggaggcatcatagacatggctagcagtaca
tttcagggaataaaaagagctacagagacttctgaagtggagagtctgcgacctcctcgg
ttcttcaatgaagatggagttatcagaccgtacaggttgagggatggtactggaaatcaa
atgttacaggtcatggaaaatggaagatttgcaaaatacaaatattttacccacgtcatg
atcaataagacagatatgctaatgataaccagatgtggtgtattgtttgtaacaaaggga
acatttggacagctcacgtgtgagtggcagtatagctttgatgagtttaccaaagagcca
ttcattgttcatgggagaagattgcgcattgaagcaaaggaacgagtgaagtctgtattt
catgccagagagtttggaaaaataattaacttcaagaccccggaggatgccaggtggatc
cttacaaaactagaagaagcaagagaaccttctccaagcctctga
DBGET
integrated database retrieval system
