Rhinopithecus roxellana (golden snub-nosed monkey): 104663654
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Entry
104663654 CDS
T03989
Symbol
LTN1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
KO
K22377
E3 ubiquitin-protein ligase listerin [EC:
2.3.2.27
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rro03009
]
104663654 (LTN1)
04121 Ubiquitin system [BR:
rro04121
]
104663654 (LTN1)
Enzymes [BR:
rro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104663654 (LTN1)
Ribosome biogenesis [BR:
rro03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
104663654 (LTN1)
Ubiquitin system [BR:
rro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104663654 (LTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
FANCL_C
zf-ANAPC11
zf-rbx1
RINGv
HipN
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
104663654
NCBI-ProteinID:
XP_010363238
LinkDB
All DBs
Position
13:31591407..31659138
Genome browser
AA seq
1766 aa
AA seq
DB search
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKKLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIQDCWLHVNAKKSVFPKLSTVIREGGRGLATVIY
PYLLPFISKLPQSITNPQLDFFKNFLTSLVAGLSTERTKTSSSESLAVISAFFECLRFIM
QQNLGEEEIEQMLINDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTA
HNLENVLIHFWERLSEICVAKINEPEADVESVLGVSNLLQVLQKPNSSLKSNKKKNGKVR
FADEIPESNKENEKCVSSEGENIEGWELTTEPSLTHNSSGFLSLLRKKPLEDLVCKLADI
SINYVNEQKSEQHLRFLSTLLDSFSSSRVFKMLLGDENQSIVQAKPLEIAKLAQKNPAVQ
FLYQKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIE
KACSSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESYFSERWTLLSLVLSQ
HVKNDYLIGDVYVERIIVKLHETLFKTKESSEAENSDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKDSTFLHLSA
VWLKNQVQASSLDINSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKEIVLEN
NELEKIIAELLYSLQWCEELDNPPIFLTGFCEMLQKVNITYDHLRVLGNTSGLLQQLFNR
SREHGTLWSLIIAKLILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKK
EFSAQCIPALLGWTKKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEH
EDIFLFSCNLSEASPEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSE
NQALYSIPLVQLFACVSCDLACDLSAFFDSTTLDNIGNLPVNLISEWKEFFSQGIHSLLL
PILVTVTGENKDVSETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQ
TLLNTLAPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSTQEDLLENVLGCVPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAIEVPNKDPKTFFTEELQLSIRETATLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSITVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggaagaacaagcagcgaactaaagggaacctgagaccgtcaaacagtggccga
gctgcagaactccttgccaaagaacagggaacagtgcctggatttattggttttggaaca
tctcagagtgacctaggctatgttcctgctattcaaggagctgaagaaattgacagtctt
gtagattctgatttccgaatggtgctgcggaagctttcaaagaaagatgtcaccacaaaa
ttaaaagctatgcaggaatttggaaccatgtgtacagagagagacacagaaactgtgaaa
ggagttcttccatattggccaagaattttttgcaaaatttcacttgatcatgaccgtcgg
gtccgagaagccacacaacaagcttttgaaaaacttatccttaaagtaaagaaacagttg
gctccctacttaaaaagtttaatgggatattggttaatggctcaatgtgatacttataca
ccggctgcgtttgcagcaaaagatgcatttgaagcggcttttcctccaagcaagcaacct
gaagccatagcattttgtaaggatgaaattacaagtgtgctgcaggatcatcttataaaa
gaaacacctgatacactcagtgacccgcaaactgttccagaggaagaaagagaagctaaa
ttctaccgggttgtaacttgttccttgttggcattaaagaaattgctttgccttttacct
gataatgaactcgattctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacacagtgtacctcagattcgctcagcttattttgagttagtttct
gcattgtgccagcgcattccacagctgatgaaagaggaagcatccaaagtgagcccatcg
gttctacttagcattgatgacagtgacccaattgtctgcccagctctctgggaagctgta
ctctatacacttacaactattcaggactgttggcttcatgtaaatgcaaaaaagagtgtg
tttcccaagctatcaactgtgattcgtgaaggtggtcggggtctagctactgtcatatat
ccttaccttctgccattcatcagcaagctccctcagtccatcacaaatccacagttggat
tttttcaaaaatttcctcacgtctctagttgctgggctgtcaacagagagaactaaaacc
agctcttcagagtccttggcagtaatatctgctttttttgaatgcttacgttttataatg
cagcaaaacttaggtgaggaagaaattgaacagatgctcatcaatgatcagttgatccct
tttattgatgcagttctcaaagacccagggttgcaacatgggcagctatttaaccattta
gcagaaactctaagttcctgggaagccaaagcagacacggaaaaagatgaaaaaacagct
cacaacttggagaacgtactgatacatttctgggaaagactgtcagagatttgtgtcgca
aaaatcaatgagccagaagctgatgttgagtccgttttgggtgtatctaacctattacag
gtgcttcagaagccgaatagctcattgaagtcaaataaaaaaaaaaatggtaaggttaga
tttgctgatgagatacctgaaagcaataaggagaatgaaaaatgtgtatcttcagaagga
gagaacattgaaggctgggaattaacaactgaaccttctctcactcataattcttcaggc
tttttgtctctgctaaggaaaaaacctttggaagacttagtctgtaaactcgcagatata
agtattaattatgtcaatgaacaaaagtcagagcaacatctaaggtttctttctactctg
cttgactccttttcttcaagccgagtatttaaaatgctacttggtgatgaaaaccagagt
attgtccaagccaaacctcttgaaatagccaagcttgcacaaaaaaatcctgcggtgcag
tttttatatcagaaactgataggctggctaaatgaagatcagaggaaggattttggtttc
ctggtggacattttgtacagtgctctccggtgctgtgacaatgatatggaaagaaaaaaa
gtcttggatgatctaaccaaggtggacctgaaatggaattctcttcttaagattattgaa
aaggcatgttctagttcagataaacatgctttagtaactccttggctaaaaggcgatatc
cttggtgagaaattggtcaacttggcagattgtctttgtaatgaggacttggaatccagg
gtatcttcagaatcttacttctcagaaagatggactcttctaagcttggtgttatcccaa
catgttaaaaatgattacttgattggagatgtatacgttgaaagaattattgttaaactt
catgaaactttattcaaaacaaaggaatcatcagaagctgaaaatagtgattcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagattttcttatctgtaaactgaaaaatacttggctctccggtgtaaat
ttattggttcatcaaactgacagttcatataaagacagtaccttcctacatttgtctgct
gtgtggctaaagaaccaagttcaggcttcatctttggatatcaacagtctccaagtcctc
ttgtctgctgttgatgatttgctaaatacacttctagagagtgaagattcttatcttatg
ggagtttatattggaagtgtaatgccgaatgacagtgaatgggaaaagatgaggcagtct
cttcctatgcagtggttacatagacctcttttagagggaagattgagtttgaattatgaa
tgtttcaaaacagattttaaggaacaggacataaagacacttcccagccatttgtgtact
tcagcattattgagcaaaatggtcttaattgcactgagaaaggaaatagtcttagaaaat
aatgagcttgagaaaataattgcggaactgctttattcactgcagtggtgtgaagaatta
gataacccacctatttttctaactggattttgtgaaatgcttcaaaaagtgaatattacg
tatgatcacttacgtgtacttggtaatacttctggccttttgcagcagttatttaacagg
tccagagaacatggcacactgtggtctcttattattgctaagttgattctttcccgaagc
atttcatctgatgaagtaaaaccacattataagagaaaagaaagttttttcccactaact
gaaggcaatttgcataccattcaaagtctatgtccatttttgtcaaaagaagaaaagaaa
gaatttagtgctcaatgtatacctgctcttttgggctggactaagaaagatctttgcagt
actaatggaggttttggacatcttgccattttcaattcttgtttgcaaaccaaaagtata
gatgatggagagctattacatggaatattgaaaatcataatatcctggaagaaagagcat
gaagatatttttcttttcagttgtaatctatcagaagcaagtccagaggtactgggtgta
aatatagaaataatccggtttctttccctatttctgaaatattgctcatcccctttggca
gagagtgagtgggacttcatcatgtgctctatgttggcttggttggagacaacaagtgag
aatcaggcattgtattctattccacttgtgcaactgtttgcctgtgtcagctgtgatttg
gcctgtgacctcagtgctttctttgattccacaactctggataacattggcaatcttcct
gtaaatctaatcagtgaatggaaagaatttttttcccaaggcatccatagtttgctttta
cctattttggtgactgttacaggagaaaacaaagatgtgtctgaaacatcctttcagaat
gcaatgctgaaacccatgtgtgaaacattaacatatatctcaaaggaacagctactgagt
cacaaacttcctgcaagattagttgctgaccaaaaaacaaacttaccagaatatctccag
actttgttaaatacattggccccattacttctcttcagagctaggcctgtgcaaattgct
gtttatcatatgctatacaaattgatgcctgaattaccgcaatatgatcaggataatcta
aagtcatatggagatgaagaagaagagccagccctgtcaccaccagccgcactgatgtct
cttcttagcactcaagaggacttactagaaaatgttttggggtgtgttcctgttggacag
atagttactattaaaccactgagtgaagacttctgttatgttctgggataccttctcact
tggaaattaatactcactttcttcaaagccgcgtcatcacagcttcgggctctgtactca
atgtatcttcggaaaacaaagagtttgaataaattgctctatcacctgttcaggcttatg
ccagaaaatccaacctatgccgagaccgcaattgaggtcccaaataaggaccctaaaaca
ttctttactgaggagctccagctgagtattcgagaaacagcaactcttccataccacatt
ccacacttggcttgctcagtctatcatatgacattaaaagatttgcctgccatggttagg
ttgtggtggaatagcagtgagaagcgtgttttcaatattgtagatagatttacaagcaag
tatgtcagcagtgttctttcttttcaagaaatatcttctgtacaaacaagtacacaactg
tttaatggcatgacggttaaagctcgagctactactcgagaggtaatggctacttatact
attgaggacatagttattgaacttataatacagctgccttcaaattatccactgggttca
ataacagtagaaagtggcaaaagagtaggagtggctgttcagcagtggcggaactggatg
ctgcagttaagcacttacctaacccatcagaatggaagtattatggaaggcttagcttta
tggaaaaataatgtagacaaacgttttgagggtgttgaagattgcatgatctgtttctca
gtcattcatggtttcaactattcccttcccaaaaaagcctgtagaacatgcaagaaaaaa
ttccattcagcttgcttgtacaaatggtttacatctagcaacaaatccacttgtccactg
tgtcgtgagacgtttttctga
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integrated database retrieval system
