Rhinopithecus roxellana (golden snub-nosed monkey): 104665145
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Entry
104665145 CDS
T03989
Symbol
COL4A5
Name
(RefSeq) collagen alpha-5(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
rro04926
Relaxin signaling pathway
rro04933
AGE-RAGE signaling pathway in diabetic complications
rro04974
Protein digestion and absorption
rro05146
Amoebiasis
rro05165
Human papillomavirus infection
rro05200
Pathways in cancer
rro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104665145 (COL4A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104665145 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104665145 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104665145 (COL4A5)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
104665145 (COL4A5)
09154 Digestive system
04974 Protein digestion and absorption
104665145 (COL4A5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104665145 (COL4A5)
09162 Cancer: specific types
05222 Small cell lung cancer
104665145 (COL4A5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
104665145 (COL4A5)
09174 Infectious disease: parasitic
05146 Amoebiasis
104665145 (COL4A5)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
104665145 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rro04147
]
104665145 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
rro00536
]
104665145 (COL4A5)
Exosome [BR:
rro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104665145 (COL4A5)
Glycosaminoglycan binding proteins [BR:
rro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104665145 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104665145
NCBI-ProteinID:
XP_030790447
LinkDB
All DBs
Position
7:95426424..95725022
Genome browser
AA seq
1691 aa
AA seq
DB search
MKLRGVSLAAGLFLLALSLWGQPAEAAACYGCSPGSKCDCSGVKGEKGERGFPGLEGHPG
LPGFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGTPGLPGMPGHDGAPGPQG
IPGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPGPPG
IQGLPGPTGIPGPIGPPGPPGLMGPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGP
PGQISEQKRPIDVEFQKGDQGLPGDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKP
GKDGENGQPGIPGLPGDPGYPGEPGRDGEKGQKGDIGPPGPPGLVIPRPGTGITIGEKGN
IGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVVGPPGPPGFPGERGQKGDEGPPGISIPG
PPGLDGQPGAPGLPGPPGPPGPHIPPSYEICEAGPPGPPGSPGDKGLQGEQGIKGDKGDT
CFNCIGTGISGPPGQPGLPGLPGPPGSLGFPGQKGEKGQAGATGSKGLPGIPGAPGAPGF
PGSKGEPGDILTFPGMKGDKGDLGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKG
ERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQAIT
QPGKPGLPGNPGRDGEVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGI
PGPPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGPPGPPGLPGFKGTLGPKGDRGFP
GPPGPPGRTGVDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHG
IPGEKGDPGPPGLDVPGPPGERGSPGIPGAPGSIGPPGSPGLPGKAGASGFPGTKGEMGM
MGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPAGEKGSKGEPGLPGPPGPMDPNLL
GSKGEKGEPGLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLI
GPPGLKGTIGDMGFPGPQGVEGPPGPPGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPG
PKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGLPGTPGPPGPKGISGPPG
NPGLPGETGPVGGGGRPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPPGLPGL
SGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGPPGPALEGPKGNPGPQGPP
GRPGPTGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRP
GLNGMKGDPGLPGVPGFPGMKGPSGIPGSAGPEGEPGLTGPPGPPGLPGPSGQSIIIKGD
AGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGLPGFDGAGGRKGDPGLPGQPGT
RGLDGPPGPDGLQGPPGPPGTSSIAHGFLITRHSQTTDAPQCPQGTLQIYEGFSLLYVQG
NKRAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPVSMQPLKG
QSIQPFISRCAVCEAPAVVIAVHSQTIQIPRCPQGWDSLWIGYSFMMHTSAGAEGSGQAL
ASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVDVSDMFSKPQSETLKAGDLRTR
ISRCQVCMKRT
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtggagtcagcctggctgccggcttgttcttactggccctgagtctttgg
gggcagcctgcagaggctgcggcttgctatgggtgttctccaggatcaaagtgtgactgc
agtggcgtaaaaggggaaaagggagagagagggtttccaggtttggaaggacacccagga
ttacctggatttccaggtccagaagggcctccagggcctcggggacaaaagggtgatgat
ggaattccagggccaccaggaccaaaaggaatcagaggtcctcctggacttcctggattt
ccagggacaccaggtcttcctggaatgccaggccatgatggggccccaggacctcaaggt
attcctggatgcaatggaaccaagggagaacgtggatttccaggcagtcccggttttccc
ggtttacagggtcctccaggaccccctgggatcccaggtatgaagggtgaaccaggtagt
ataattatgtcatcactgccaggaccaaagggtaatccaggatatccaggtcctcctgga
atacaaggcctacctggtcccactggtataccagggccaattggtcccccaggaccacca
ggtttgatgggccctcctggtccaccaggacttccaggaccaaaggggaatatgggctta
aatttccagggacccaaaggtgaaaagggtgagcaaggtcttcagggcccacctgggcca
cctgggcagatcagtgaacagaaaagaccaattgatgtagagtttcagaaaggagatcag
ggacttcctggtgaccgagggcctcctggacctccagggatacgtggtcctccaggtccc
ccaggtggtgagaaaggtgagaagggtgagcaaggagagccaggcaaaagaggtaaacca
ggcaaagatggagaaaatggccaaccaggaattcctggtttgcctggtgatcctggttac
cctggtgaacccggaagggatggtgaaaagggccaaaaaggtgacattggcccacctgga
cctcctggacttgtaattcctagacctgggactggtataactataggagaaaaaggaaac
attgggttgcctggcttgcccggagaaaaaggagagcgaggatttcctggaatacagggt
ccacctggccttcctggacctccaggggctgcagttgtgggtcctcctggccctcctgga
tttcctggagaaaggggtcagaaaggtgatgaaggaccacctggaatttccattcctgga
cctcctggacttgatggacagcctggggctcctgggcttccagggcctcctggccctcct
ggacctcacatccctcctagttatgagatatgtgaagcaggccctccaggccccccagga
tctccaggtgataaaggactccaaggagaacaaggaattaaaggtgacaaaggtgacact
tgcttcaactgcattggaactggtatttcagggcctccaggtcaacctggtttgccaggt
ctcccaggtcctccaggatcccttggtttccctggacagaaaggtgaaaaaggacaagct
ggtgcaactggttccaaaggattaccaggcattccaggagctccaggtgctccaggcttt
cctggatctaaaggtgaacctggtgatatcctcacttttccaggaatgaagggtgacaaa
ggagatttgggttcccctggagctccagggcttcctggtttacctggcactcctggacag
gatggattgccaggacttcctggcccgaaaggagagcctggtggaattacttttaagggt
gaaagaggtccccctgggaacccaggtttaccaggcctcccagggaatatagggcctatg
ggtcctcctggttttggccctccaggcccagtaggtgaaaaaggcatacaaggtgtggca
ggaaatccaggccagccaggaataccaggtcctaaaggggatccaggtcaggctataacc
cagccagggaagcctggcttgcctggtaacccaggcagagatggtgaagtaggtcttcca
ggtgaccctggactcccagggcaaccaggcttgccagggatacctggtagcaaaggagaa
ccaggtatccctggaattgggcttcctggaccacctggtcctaaaggctttcctggaatt
ccaggacctccaggagcacctgggacacctggaagaattggtctagaaggccctcctggg
ccacctggctttccaggaccaaagggtgaaccaggatttgcattacctgggccacctggg
ccaccaggacttccaggtttcaaaggaacacttggtccaaaaggtgatcgtggtttccca
ggacctccaggtcctccaggacgcactggcgtagatgggctccctggaccaaaaggtgat
gttggaccaaatggacaacctggaccaatgggacctcctgggctgccaggaataggtgtt
cagggaccaccaggaccaccagggattcctgggccaataggtcaacctggtttacatgga
ataccaggagagaagggggatccaggacctcctggacttgatgttccgggacccccaggt
gaaagaggcagtccagggatccctggagcacctggttctataggacctccaggatcacca
gggcttccaggaaaagcaggtgcctctggatttccaggtaccaaaggtgaaatgggtatg
atgggacctccaggcccaccaggacctttgggaattcctggcaggagtggtgtacctggt
cttaaaggtgatgatggcttgcagggtcagccaggacttcctggccctgcaggagaaaaa
ggtagtaaaggagagcctggccttccaggccctcctggaccaatggatccaaatcttctg
ggctcaaaaggagagaagggggagcctggcttaccaggtatacctggagtttcagggcca
aaaggttatcagggcttgcctggagacccagggcaacctggactgagtggacaacctgga
ttaccaggaccaccaggtcccaaaggtaaccctggtctccctggacagccaggtcttata
ggacctcctggacttaaaggaaccatcggcgacatgggttttccagggcctcagggtgtg
gaagggcctcctggacctcccggagttcctggacagcctggctccccaggattacctgga
cagaaaggcgacaaaggtgatcctggtatttcaagcattggtcttccaggtcttcctggt
ccaaagggtgagcctggtctgcctggatacccagggaaccctggtatcaaaggttctgtg
ggagatcctggtttgcctggattaccaggaacccccggagcaaaaggacaaccaggcctt
cctggactcccaggaaccccaggccctcctggaccaaaaggtattagtggccctcctggg
aaccctggccttccaggagaaactggtcctgtaggtggtggaggtcgtcctgggcaacca
gggcctccaggcgaaaaaggcaaacccggtcaagatggtattcctggaccagctggacag
aagggtgaaccaggtcaaccaggctttggaaacccaggaccccctggacttccaggactt
tctggccaaaagggtgatggaggattacctggaattccaggaaatcctggccttccaggt
ccaaagggcgaaccaggctttcacggtttccctggtgtgcagggtcccccaggccctcct
ggtcctccgggtccagctctggaaggacctaaaggcaaccccgggccccaaggtcctcct
gggagaccaggtcctacaggttttcaaggtctaccaggtccggaaggtcccccgggtctc
cctggaaatggaggtattaaaggagagaagggaaacccaggccaacctgggctacctggc
ttgcctggtttgaaaggagatcaaggaccaccaggactccagggtaatcctggtcggccg
ggtctcaatggaatgaaaggagatcctggtctccctggtgttccaggattcccaggcatg
aaaggacccagtggaatacctggatcagctggtcctgaaggggaaccgggacttaccggt
cctccaggtcctcctggattacctggtccttcaggacagagtatcataatcaaaggagat
gctggtcctccaggaatccctggacaacctgggttgaaaggtctaccaggaccccaagga
cctcaaggtttaccaggtccaactggccctccaggagatcctggacgcaatggactccct
ggctttgatggtgcaggagggcgcaaaggagacccaggtctgccaggacagccaggtacc
cgtggtttggatggtccccccgggccagatggattgcaaggtcccccaggtccccccgga
acctcctctattgcacatggatttcttattacacgccacagccagacaacggatgcacca
caatgcccacagggaacacttcagatctatgaaggcttttctctcctgtatgtacaagga
aataaaagagcccatggtcaagacttggggacagctggcagctgccttcgtcgctttagt
accatgcctttcatgttctgcaacatcaataatgtttgcaactttgcttcaagaaatgac
tattcttactggctgtctaccccagagcccatgccagtgagcatgcaacccctaaagggc
cagagcatccagccattcattagtcgatgtgcagtatgtgaagctccagctgtggtaatc
gcagttcacagtcagacgatccagattccccgttgtcctcagggatgggattctctgtgg
attggttattccttcatgatgcatacaagtgcaggggcagaaggctcaggtcaagcccta
gcctctcctggttcctgcttggaagagtttcgttcagctcccttcatcgaatgtcatggg
aggggtacctgtaactactatgccaactcctacagcttttggctggcaactgtagatgtg
tcagacatgttcagtaaacctcagtcagaaacgctgaaagcaggagacttgaggacacga
attagccgatgtcaagtgtgcatgaagaggacataa
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