Rhinopithecus roxellana (golden snub-nosed monkey): 104665820
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Entry
104665820 CDS
T03989
Symbol
USP42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rro01002
]
104665820 (USP42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rro04121
]
104665820 (USP42)
Enzymes [BR:
rro01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104665820 (USP42)
Peptidases and inhibitors [BR:
rro01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104665820 (USP42)
Ubiquitin system [BR:
rro04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104665820 (USP42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104665820
NCBI-ProteinID:
XP_030788041
LinkDB
All DBs
Position
6:complement(48808357..48866044)
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AA seq
1324 aa
AA seq
DB search
MTIVDKASESSDPSAYQNQPGSSEAVSPGDMDAGSASWGAVSSLNDVSNHTLSLGPVPGA
VVYSSSSVPDKSKPSPQKDQALGDGIAPPQKVLFPSEKICLKWQQNHRVGAGLQNLGNTC
FANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAHITQALSNPGDVIKPMFVI
NEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRS
RVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPA
SKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVL
VHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGE
LTHPTHSPGQSSPRPVISQRVVTNKQAAPGFIGPQLPSHMIKNPPHLNGTGPLKDTPSSS
MSSPNGNSSINRASPVNASASVQNWSVNRSSVIPEHPKKQKITISIHNKLPVRQCQSQPN
LHNNSLENATKPVPSSTITNSAVQSTSNASTMSVSSKVTKPIPRSESCSQPVMNGKSKLN
SSVLVPYGAESSEDSDEESKGLGKENGIGTIASSHSPGRDAEDEEAAPHELQEPMTLNGA
NSADSDSDPKENGLLPDGASCQGQPALHSENPFAKANGLPGKLMPAPLPSLPEDEILETF
KLSNKLKGSTDEMSAPGAERGPPEDGDPEPQPGSPAAESLEELDAAASLSSTKKAPSPPD
PGTPTTKEGAWEALAAAPEELPPGAGQDIAGDTAPPDLCDPGSLTGDASPLSQDAKGMIA
EGPRDSAMAEAPEELSPALPARSEEPCEQPLLVHPSGDHAWDGQDLPQSSGAPEAAEGPL
APVPEAAPAGHPEGDAEPSPGERGEDAAAPKAPGPSPVKEKIGSLRKVDRGHYRSRRERS
SSGEPARESRSKTEGHRHRRRGTCPRERDRQDRHAAEHHPGHGDRPSPGERGSLGRYSHH
HSRHRSGAEPDWVRHHYTEGEHGWGREKFYADRPRWDRCRYYHDRYAPYAARDWKPFHGG
REHERAGLHERPRKDHSRGRRGSEPARERERHRLGSPRAGAPHALAPHPDRFSHDRTALV
AGDNCNLSDRFHEHENVKSRKRRHDSVENSDSHVEKKARRSELKDPLEEPKVKKHKKSKK
KKKSKDKHRERDSRHQQDSDLSAACSDADLHRHKKKKKKKKRHSRKSEDFVKDSELHLPR
AASLETVAQFRRAQGGFPLPGGPPLEGVGPFREKTKHLRMESRDDRCHLFEYGQGKRRYL
ELRR
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagcttctgaatcttcagacccatcagcctatcagaatcagcct
ggcagctctgaggcagtctcacctggagacatggatgcaggttctgccagctggggtgct
gtgtcttcattaaatgatgtgtcaaatcacacactttctttaggaccagtacctggtgct
gtagtttattcaagttcatctgtacctgataaatcaaaaccatcaccacaaaaggatcaa
gccctaggtgatggcattgctcctccacagaaagttcttttcccatctgagaagatttgt
cttaagtggcagcaaaatcatagagttggagctgggctccagaatttgggcaatacctgt
tttgccaatgcagcactgcagtgtttaacttacacaccacctctcgccaattacatgctc
tcacatgaacactctaaaacatgtcatgcagaaggcttttgtatgatgtgtacaatgcaa
gcacatattacccaggcactcagtaatcctggggacgttattaaaccaatgtttgtcatc
aatgagatgcggcgtatagctaggcacttccgttttggaaaccaagaagatgcccatgaa
ttccttcagtacactgttgatgctatgcaaaaagcatgcttgaatggcagcaataaatta
gacagacacacccaggccaccactctcgtttgtcagatatttggaggatacctaagatct
agagtcaaatgtttaaattgcaagggcgtttcagatacttttgatccatatcttgatata
acattggagataaaggctgctcagagtgttaacaaggcgttggaacagtttgtgaagccg
gaacagcttgatggagaaaactcatacaagtgcagcaagtgtaaaaagatggttccagct
tcaaagaggttcactatccatagatcctctaatgttcttacactttctctgaaacgtttt
gcaaattttactggtgggaaaattgctaaggatgtgaaataccctgagtatcttgatatt
cggccatatatgtctcaacccaacggagagccgattgtttacgtcttgtatgcagtgctg
gtccacactggttttaattgccatgctggccattacttctgctacataaaagctagcaat
ggcctctggtatcaaatgaatgactccattgtgtctaccagtgatattagatcggtactc
agccaacaagcctatgtgctcttttatatcaggtctcatgatgtgaaaaatggaggtgaa
cttactcatcccacccatagccccggccagtcctctccccgccccgtcatcagtcagcgg
gttgtcaccaacaaacaggctgcgccagggtttatcggaccacagcttccctctcacatg
ataaagaatccacctcacttaaatgggactggaccattgaaagacacaccaagcagttcc
atgtcaagtcctaatgggaattccagtatcaacagggctagtcctgttaatgcttcagct
tctgtccaaaactggtcagttaataggtcttcagtgatcccagaacatcctaagaaacaa
aaaattacaatcagtattcacaacaagttgcctgttcgccagtgtcagtctcagcctaac
cttcataacaattctttggagaacgctaccaagcccgttccctcttctaccattaccaat
tctgcagtacagtctacctcgaatgcatccacgatgtcagtctctagtaaagtaacaaaa
ccgatcccccgcagcgaatcctgttcccagcccgtgatgaatggcaaatccaagctgaac
tccagcgtgctagtcccctatggcgccgagtcctctgaggactctgacgaggagtcgaag
gggctgggcaaggagaatgggattggtacgattgcgagctcccactctcccggccgagat
gccgaagatgaggaggctgctccgcacgagctccaagaacccatgaccctaaacggtgct
aatagtgcagacagcgacagtgacccaaaagaaaacggcctgctgcccgatggtgccagc
tgccaaggccagcctgccctgcactcagaaaatccctttgctaaggcaaacggtcttcct
ggaaagttgatgcctgctcctttgccgtctctcccagaagacgaaatcttagagaccttc
aagcttagcaacaaactgaaaggctcgacagatgaaatgagtgcacctggagcagagagg
ggccctcccgaggatggcgatcccgagccccagcctggcagccccgccgccgaatccctg
gaggaactggatgcggccgccagcctcagcagcaccaagaaggctccgtcgcccccggat
cccggcactcccactaccaaagaaggcgcttgggaggccttggctgccgccccggaagag
cttccgcccggcgctgggcaggacatcgcgggggacacagcgcctccggacctgtgtgat
cccgggagcttaacgggcgacgcgagcccgctgtcccaggacgcaaaggggatgatagcg
gagggcccgcgggactctgcgatggcggaagccccggaggagttgagtccggctctgcct
gcgcggtcggaggagccctgcgagcagccgctccttgttcaccccagcggggaccatgcc
tgggacggtcaggacctgccccagagctcgggcgcgcccgaggccgcagaggggccgcta
gctcctgtgccggaggcggccccggccggtcacccggaaggggatgcagagcctagcccc
ggcgagaggggcgaggacgccgcggcgccgaaagctccaggcccttccccggtgaaggag
aaaatcggcagcctcagaaaggtggaccgaggccattaccgcagccggagggagcgttcg
tccagcggggagcccgccagagagagcaggagcaagactgagggccaccgccaccggcgg
cgcggcacctgcccccgggagcgcgaccgccaggaccgccacgctgcggagcaccacccc
ggccacggcgacaggcccagccccggcgagcgcggctctctgggcaggtacagtcaccac
cactcccgacaccgcagtggggcggagccggactgggtcagacaccactacaccgagggc
gagcatggctggggccgggagaagttctacgccgacaggccgcgctgggacaggtgccgg
tactaccatgacaggtacgccccgtacgccgcccgggactggaagcccttccacggcggc
cgcgagcacgagcgggccgggctgcatgagcggccgcgtaaggaccacagtcggggccgt
aggggctccgagccagcccgggagagggagcggcaccgccttggcagcccccgtgcagga
gcgccccacgctctcgccccgcaccccgaccgcttctcccacgacagaactgcacttgta
gccggagacaactgtaacctctctgatcggtttcacgaacacgaaaatgtaaagtcacgg
aaacggagacacgacagcgtggaaaacagtgacagccatgtcgagaagaaagcacggagg
agcgaactgaaggaccctctagaagagcctaaagtgaagaagcacaaaaaatcaaagaag
aaaaagaaatccaaagacaaacaccgagagcgcgactccaggcatcagcaggactcagac
ctctcagcagcatgctctgacgctgacctccacagacacaaaaaaaagaagaagaaaaag
aagagacattcaagaaaatcagaggactttgttaaagattcagaactgcacttacccagg
gccgccagcttggagactgttgcccagttccggagagcccagggcggctttcctctgccc
ggtggcccgcctctggaaggcgtaggacctttccgtgagaaaacgaaacacttacggatg
gaaagcagggatgacaggtgtcatctctttgagtatggccagggtaagaggagatacttg
gaattaagaagatag
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