KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104666198
Entry
104666198         CDS       T03989                                 
Symbol
MDC1
Name
(RefSeq) mediator of DNA damage checkpoint protein 1 isoform X6
  KO
K20780  mediator of DNA damage checkpoint protein 1
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:rro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rro03400]
    104666198 (MDC1)
DNA repair and recombination proteins [BR:rro03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    104666198 (MDC1)
SSDB
Motif
Pfam: BRCT_2 FHA RTT107_BRCT_5 BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 104666198
NCBI-ProteinID: XP_010366517
LinkDB
Position
4:complement(23982195..24000300)
AA seq 1822 aa
MEDTQAIDWDIEEEEETEQSSESLRCNVEPVGRLHIFSGAHGPEKDFPLHLGKNVVGRMP
DCSVALPFPSISKQHAEIEILAWDKAPILRDCGSLNGTQILRPPKVLSPGVSHRLRDQEL
ILFADLLCQYHRLDVSLPFVSRGPLTVEETPRVQGGTQPQRLLLAEDSEEEVDFLSERRV
VKKSRTTSSPVAMIVPESDEEGHSPVLGGPGPPFAFNLNSDTDAEEGQQSATEEASSAAR
RGATIEAEQSEAEVVTEIQLEKDQPSVKERDNDTKVKRGAGNGVVLAGIILERSQPPGED
SDTDVDDDSRPPGRPAEVHLEKAQPFGFIDSDTDAEEEGIPATPVVVPMKKRKIFHGVGT
GGPGAPGLSHLQESQADSDTDVEEGKAPQAVPLEKSQASMVINSDTDDEEEVSAALTLAR
LKESQPAVWNRDAEEDMAHHVVLLQRSQTTTGRDSDTDVEEEELPVENTETVPKGHTKIR
ALVRAHSEKDQPPFGDSDDSVEADKSSPGIHLERSQASITVDINTKVEEEVPPGSAIVHM
KKHQVSMEGTNQTDVKADGGPAKLPVVSLEEAWPPHGDCETDAEEGTSLAASAVADVRRS
QLPAEGDTGAEWTAACLKQERAYEVGAQGGSPVAQVEQDLPTSRENLTDVVDTDIPGEST
QPQREGAQVPRERERKQHVGRTKDSEDNCDDSEDPDLQATQCFLENQGLEVQSMEDEPTQ
AFMLTPPQELGPSHCSFQTTGLLNCKMPPTEKASRIRAAEKASRGDQESPDACLPPTVPE
ASAPPQKPLNSQSQKHLAPQPLLPPLSPSIEPTIRKTEQDRSQEAPETPLSSELEPFHPK
PKIITRKSSRMTPFPATSAAPEPHPSTSTAQPVTPKPTSQATRSRTNRSSVKTPEPVVPT
VTELQPSTSTDQPVASEPTSQATRRRKNRSSVKTRETVVPTALELHPSTSTDQPVTPKPT
SQTTRSRTNRSSVKTPKPVVPTVPELQPSTSTDQPVASEPTSQATRRRKNRSSVKTPETV
VPTALELQPSTSTDQPVTPKPISRTTRSRTNRSSVKTPESTVLIAPELPPSTSTEQPVTS
EPTYQATRGRKNRSSVKTPETVVATAPKLQPSTSTDQPITPEPTSQATRGRTNRSSVKSP
ETVLPTAPELQPSTSTHQPVTPKCTSQATRGRTNRSSVKTPEPVVSTAPELQPSTSTHQP
ITPEPTSQATRGRTDRSSVKTLETVVPTAPELQASTSTDQPVTSEPTSRTTRGRKNRSSV
KTPETVVPTAPEPHPTTSTDQPVTPKPTSRATRGRTNRSSVKTPELIVPIAPELYPSTSR
SQLVTPEPTSRATRGRTNRSSVKTPEPAVPTAPEPHPTTSTDQPVTPKPTSRATRGRTNR
SSVKTPESVEPAASDLEPFTPTDQPVTPEAIPQGGQSKTLRSSTVSAMLIPTTPEFQSPV
TTDQPISPEPIPQASCIKRQRATGNPGSLTAPIDHKPCSAPLEPKSRPSRNQRWGAVRAG
ESLTAIPEPTSPQLLDTPTHASQIQKVEPTGRSRFTPELQPKASQSRKRSLAIMDSPHQK
QPQRGEVSQKTLIIKEEEEDTVEKPGKEEDVMTPKPGKRKRDQAEEEPNRIPNRSLRRTK
LNQESTAPKVLFTGVVDARGERAVLALGGSLAGSAAEASHLVTDRIRRTVKFLCALGRGI
PILSLDWLHQSGKAGCFLPPDEYVVTDPEQEKNFGFSLQDALSRARERRLLEGYEIYVTP
GVQPPPPQMGEIITCCGGTYLPSMPRSYKPQRVVITCPQDFPRCSVPLRVGLPLLSPEFL
LTGVLKQEAKPEAFVLSPLSST
NT seq 5469 nt   +upstreamnt  +downstreamnt
atggaggacacccaggctattgactgggatattgaagaagaggaggagacagagcaatcc
agtgaatccttgaggtgtaatgtggagccagtagggcggctacatatctttagtggtgcc
catggaccagaaaaagatttcccactacacctcgggaagaatgtggtaggccgaatgcct
gactgctctgtggccctgccctttccatctatctccaaacaacatgcagagattgaaatc
ctagcctgggacaaggcacctatcctccgagactgtgggagccttaatggtactcaaatc
ctgagacctcctaaggttttgagccctggggtgagtcaccgtctgagggaccaggaattg
attctctttgctgacttgctctgccagtaccatcgcctggatgtctctctgccctttgtc
tcccggggccctctgactgtagaagagacacccagggtacagggaggaactcaaccccag
aggcttctgttagctgaggactcagaggaggaagtagattttctttctgaaaggcgtgtg
gtaaaaaaatcaaggaccacatcttcccccgtggcaatgatagttccagagagtgatgaa
gaggggcattcccctgtcctgggtggccctgggccgccttttgccttcaatttgaacagt
gacacagatgcggaagaaggtcagcaatcagccacagaggaggcctcctcagctgccaga
agaggtgccactatagaggcagagcagtctgaagctgaagttgtaactgaaatccagctt
gaaaaggatcagccttcagtgaaggagagggacaatgacacaaaagtcaagaggggtgca
gggaatggggtagttctagctgggataattctggagaggagccaacctcctggagaggat
agtgacacagatgtggatgatgacagcaggcctcctggaaggccagctgaggtccatttg
gaaaaggctcagccttttggcttcatcgacagcgacaccgatgcggaagaagaggggatt
ccagcaaccccagttgtcgttcctatgaagaagaggaagatctttcatggagttggtaca
gggggtcctggagcaccaggcctgtcccatctgcaggagagccaggctgatagtgataca
gatgtggaggaaggcaaggccccacaggctgtccctctggagaaaagccaagcttccatg
gttatcaacagcgatacagatgatgaggaagaagtctcagcagcgctgactttggcacgt
ctgaaagagagccagcctgctgtatggaacagagatgcagaagaggacatggcccaccat
gtggtccttctccagcgaagccaaaccaccactgggagagacagtgacacagatgtggag
gaggaagagctcccagtggaaaatacagaaaccgtccccaagggtcacacaaagattaga
gcccttgttagagcacattcagaaaaggaccagcctccttttggggacagtgatgacagt
gtggaagcagataagagctcacctgggatccacctggaaagaagccaagcctccatcaca
gtggacatcaacacaaaagtagaggaggaagtcccgccagggtcagccattgtacatatg
aagaagcatcaggtgtctatggaggggacaaatcaaacagatgtgaaagcagacggggga
ccagcaaagctgcctgtggtatctctagaggaagcctggcctccgcatggggactgtgaa
acagatgcggaggagggcacctccttagcagcctcagcagttgcagatgtaagaaggagc
cagcttccagcagaaggggatactggggcagagtggactgcagcttgtcttaagcaggag
agagcttatgaggtgggggcccagggtgggtcacctgtggcacaagtggagcaggacctc
cctacctcaagagagaacctcacagatgtggtggacacagacattccaggggaatccacc
cagccacagagagagggagcccaggtccccagagaaagggagagaaaacaacatgtgggt
aggaccaaggactctgaagacaactgtgatgattctgaagatccggacctacaagctacc
caatgctttctggagaatcagggcttggaagtccagagcatggaggatgaacctacccag
gccttcatgttgactccaccccaagaacttggcccttcccattgcagcttccagacaaca
ggcctcctgaattgtaagatgccacccactgagaaggcttctaggatcagagctgctgag
aaagcttccaggggcgatcaggaatctccagatgcttgtctgcctcctacagtgcctgaa
gcctcagccccaccccaaaagccccttaactctcagagccagaaacatcttgcacctcag
ccccttcttcctcccctttcaccttctatcgagccaaccattcgtaagaccgagcaggat
aggagtcaggaagctccagagactcccttgtcctcagagctggagcctttccacccaaag
cctaaaatcataactcggaagtcctctaggatgacaccctttccagctacctctgctgcc
cctgagccccacccttccacctccacagcccagccagtcacccccaagcccacatctcag
gccactaggagcaggacaaataggtcctctgtcaagacccctgaaccagttgtgcccaca
gtcactgagctccagccttccacctccacagaccagcctgtcgcctctgagcccacatct
caggctactaggagaagaaaaaatagatcctctgtcaagacccgtgaaacagttgtgccc
acagcccttgagctccacccttccacctccacagaccaacctgtcacccccaagcccaca
tctcagaccactaggagcaggacaaataggtcctctgtcaagactcctaaaccagttgtc
cccacagtccctgagctccagccttccacctccacagaccagcctgtcgcctctgagccc
acatctcaggctactaggagaagaaaaaatagatcctctgtcaagacccctgaaacagtt
gtgcccacagcccttgagctccagccttccacctccacagaccaacctgtcacccccaag
cccatatctcggaccactaggagcaggacaaataggtcctctgtcaagacccctgaatca
actgtccttatagcccctgagctcccaccttccacctccacagagcagcctgtcacctct
gagcccacatatcaggctactaggggaagaaaaaatagatcctctgtcaagacccctgaa
acagttgtggccacagcccctaagctccagccttccacctccacagaccaacctatcact
cctgagcccacatctcaggccaccaggggtaggacaaataggtcctctgtcaagagccct
gaaacagttctccccacagcccctgagctccagccttccacctccacacaccagccagtc
actcccaagtgcacatctcaggccaccaggggcaggacaaataggtcctccgtcaagacc
cctgaaccagttgtctccacagcccctgagctccagccttccacctccacacaccagcct
attacccccgagcctacatctcaggctactaggggaagaacagatagatcctctgtcaag
actcttgaaacagttgtgcccacagcccctgagctccaggcttccacctccacagaccag
cctgtcacctctgagcccacatctcggaccactaggggaagaaaaaataggtcttctgtc
aagacccctgaaacagttgtgcccacagcgcctgagccccatcctaccacctccacagac
cagcctgtcacccccaagcccacatctcgggccactaggggcaggacaaataggtcatct
gtcaagactcctgaattaattgtccctatagcccctgagctttacccttccacctccaga
agccagcttgtcacccctgagcccacatctcgggccactaggggcaggacaaataggtcc
tctgtcaagacccctgagccagctgtccccacagcccctgagccccatcctaccacctcc
acagaccagcctgtcacccccaagcccacatctagggccactaggggaaggacaaatagg
tcctctgtcaagactcctgaatcagttgaaccagcagcctctgatcttgagccttttacc
cccacagaccagcctgtcacccctgaggccatacctcagggtggtcagagcaaaacactg
aggtcttccacagtaagtgctatgctaattcctactacccctgaattccaatctcctgtc
accacagaccagcctatttcccctgagcctattcctcaagccagttgcatcaagaggcag
agagccactgggaatcctggctccctcacagctcccattgaccataagccttgctctgca
cccctggaacctaaatcccggccctcaaggaaccaaagatggggagcagtgagagcaggt
gaatcccttacagccattcctgagcctacctctccccagcttcttgatacaccaactcat
gcctcccagatccaaaaggtggaaccaacaggtagatctaggttcaccccagagctccag
cctaaggcctctcaaagccgcaagaggtctttagctatcatggattcaccacatcaaaaa
cagccccaaagaggggaagtctcccagaagacactgattatcaaggaagaggaagaagat
actgtggagaagccagggaaggaagaggatgtcatgactccaaaaccaggcaagagaaag
agagaccaggcagaggaggagcccaacagaatacctaatcgcagcctccgacggaccaaa
cttaaccaagaatcaacagcccccaaagtgctcttcacaggagtggtggatgctcgggga
gagcgggccgtgctggcacttgggggaagtctggctggttcagcggcagaggcttcccac
ctggtcactgatcgcatccgccgaacagtcaagttcctgtgtgccctggggcggggaatc
cccattctctccctggactggctgcatcagtccggcaaggccggttgcttcttacccccg
gatgaatatgtggtgactgaccctgagcaagagaagaactttggctttagccttcaagac
gcactgagtcgggctcgggagcgaaggctgctggagggctatgagatctatgtgacccct
ggagtccagccaccaccacctcagatgggagagatcattacctgctgtggaggcacatac
ctacccagcatgcctcggtcctataagcctcagagagttgtgatcacatgccctcaggac
ttccctcgttgctctgttccactgcgtgttgggctgcccctcctctcacctgagttcctg
ctgactggagtgctgaagcaggaagccaagccagaggcctttgtcctttcccctttgtca
tctacctga

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