Rhinopithecus roxellana (golden snub-nosed monkey): 104666377
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Entry
104666377 CDS
T03989
Symbol
FOCAD
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104666377 (FOCAD)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
104666377 (FOCAD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
104666377
NCBI-ProteinID:
XP_030775461
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All DBs
Position
16:72583133..72910812
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AA seq
1816 aa
AA seq
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MVENEAAYIHVREAKMSDDIRKRFEFPNSLIQSQAVGHLIAAVLKENGFSEKIHQSTNQT
PALNLLWEKCCSDNVVVRTACCEGLVALVAQDHAEFSYVLNGILNLIPSTRNTHGLIKAI
MKLLQMQALKEGQGGERNIQNIYTIRNHPHPLITVLEHRPDCWPVFLQQLTAFFQQCPER
SEVSCIQIMAPFLWYLYCEPSQLQEYAKLRLALLKVLLQPQVLCDKDQPSILEQQILQLC
CDMVPCLQIKDLIQTTEAMMFIEEVYLSLLRHPVFWKIQLTQMTLQLLCVCEVSLKITGE
CSSLIHLLEHSVELLKEDFPVELVVIGIALLLLQTPASQQKPILNLALKLLSVTEDQKIP
KSSLLLVMPILQILSSTALEDCISMDEEGPSRQQLALNLLEMVQQECYRDDHQKLSYKLA
WPVTSVYGSIFTAWRILEVMRDSSAASDWLASVESLLPITTVIPVPAFLLLAHLLVEDKG
QNLHQILKVTTELAQADSSQVPNLIPVLMFKLGRPLEPILYNDILYSLPKLGVHKVCVGQ
ILRVIQLLGTTPRLRAVTLRLLTSLWEKQDRVYPELQRFMAMSDVPSLSVGKEVQWEKLI
AKAASIRDICKQRPYQHGADMLAAISQVLNECTKPDQATPAALVLQGLHALCQAEVVCIR
STWNALSPKLSCDTRPLILKTLSELFSLVPSLTVNTTEYENFKVQVLSFLWTHTQNKDPI
VANAAYRSLSNFSAAEHTILHLPEKIRPEIPIPEELDDDEDDEDVDLSVPGSCYLKLLSL
TPPLVLPALEEFFTSLVKQEMVNMPRGIYHSALKGGARSDQGKTVAGIPNFILKMYETNK
QPGLKPGLAGGMLFCYDVSMYQSKDGKPLNRLMASRGRSFKQTSLALVHEVHIQLSEWHR
AIFLPQAWLAYMSRAYHAILQGRLGELELQLKHGKEEPEEVQYKKSTAWLWVRDILTDEI
TKAAAKESPVVKGNALLALSSLAVIVSRHEASLSSDSDGLLEVQPNFLSMKEWISMVLDT
LLVIVDSHYQPRGQLLSWFYYKSYSGENTASAIARSAAATALSLLVPVFIISCKEKVEEI
LNMLTARLPGKPSADESPAVQIHMGLALGMFLSRLCEEKLSDISGQEMNLLLMKSLDALE
NCCFDTSLEYNTGCILGVGLVLSLMSHSSQMQSRVHVAASLRKLSAYLDDSGSQSRTFQE
VLAYTLSCVCTSAFSAGIIEAAEAEDVMNKLRLLVENSQQTSGFALALGNIVHGLSVCGH
GKAEDLGSKLLPAWIRIVLTEGTPTMLCLAALHGMVALVGSEGDVMQLKSEAIQTSHFQG
RLNEVIRTLTQVISVSGVIGLQSNAIWLLGHLHLSTLSSSQSRASVPTDYSYLPESSFIG
AAIGFFITGGKKGPESVPPSLLKLVMKPIATVGESYQYPPVNWAALLSPLMRLNFGEEIQ
QLCLEIMVTQAQSSQNAAALLGLWVTPPLIHSLSLNTKRYLLISVPLWIKHISDEQILGF
VENLMVAVFKAASPLGNPELCPSALQGLSQAMKLPSPAHHLWSLLSEATGKIFDLLPNKI
RRKDLELYISIAKCLLEMTDDDANRIAQVTKSNIEKAAFVKLYLVSQGRFPLMNLTDMLS
VAVQHREKEVLAWMILHSLYQARIVSHANTGVLKRMEWLLELMGYIRNVAYQSTSFQNMT
LDEALDFFLLIFATAVVAWADHAAPLLLSLSASWLPWHQENGPAGPVPSFLGRSPMHKVT
LQEVLTLLPNSMALLLQKEPWKEQTQKFIDWLFSIMESPKEALSAKSRDLLKATLLSLRV
LPEFKKKAVWTRAYGW
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaatgaagctgcatacatacatgtaagagaagcaaaaatgtcagatgatatc
aggaaaaggtttgaatttccaaattctcttatccaatcacaggctgtgggtcatcttatt
gctgcagtcctaaaggaaaatggtttttcagaaaagattcaccaatctacaaatcagact
cctgctttgaacttgctgtgggagaagtgttgcagtgacaatgtagtggttcgaacagcc
tgctgtgaaggtctggtggcactcgttgctcaggatcatgcagagttcagctatgttctc
aatgggatactcaatctgattccatcaaccagaaatacacatggcttgataaaagccatt
atgaaattactacaaatgcaagctcttaaggaaggacaaggtggggaaaggaatattcag
aatatatataccattagaaatcatcctcatcctttgatcactgtgcttgaacacagacct
gattgctggccagtatttttgcagcagctgacagcatttttccagcagtgccctgaaagg
tcagaagtttcatgcattcaaataatggcaccatttctgtggtatctgtattgtgaacca
tctcagttacaagaatatgctaaactccgactagccctgctgaaagtcttacttcaaccc
caggttctttgtgacaaagatcaaccatcaatactggaacagcagatacttcaactgtgt
tgtgacatggttccatgtttgcagataaaagatttgatacagacaacagaagcgatgatg
tttattgaggaagtatatttaagccttttgcgtcatcctgttttctggaaaattcagctt
acccagatgactcttcagctgctgtgtgtctgtgaagtcagcttaaagataactggcgaa
tgttcatctttaattcaccttttagagcacagtgttgaacttctgaaggaggactttcct
gttgaactggtcgtaattggaatagctttactacttctacagactccagcaagtcagcag
aagccaatcttaaatctagctttgaagctcctctctgttactgaggatcagaaaatccca
aagtcctctctgctgttagtgatgccaattctgcagatactatcttctactgccttggaa
gactgtatatctatggatgaagaaggtccctctaggcagcagttggctctaaaccttttg
gaaatggtacagcaggaatgttacagagatgaccaccaaaagctctcctacaagcttgcg
tggcctgtaaccagtgtgtatggttcaatatttacagcctggaggattcttgaagtaatg
agagactcgtctgctgcaagtgactggttggcctcagtagagtcattgcttcctattact
actgtgatccctgtgcctgcttttcttctgctggctcacctccttgttgaagacaaagga
cagaatcttcaccaaatactgaaggtcactacagaattagcccaagcagattcctcccag
gtgccaaatctgattccagttttgatgttcaaattgggaagaccactggaacctatatta
tataatgatatattgtatagtttacctaagcttggtgttcacaaggtgtgtgtaggacaa
attctacgagtaatacaactacttggaaccaccccacgactaagagctgtcactttgcgt
ttgctgacatcattgtgggaaaagcaggaccgagtctatcctgaactgcagcgtttcatg
gctatgtctgatgtaccttctctttcggtgggcaaggaagtccaatgggagaaactgatt
gcaaaagcagcatcaatcagagatatatgtaagcagaggccatatcaacatggtgcagat
atgttggcagctatttctcaggtgttgaatgaatgcaccaagcctgatcaagctactcca
gcagccttggtattacaaggtcttcatgcactctgtcaagctgaggttgtttgcattcgc
tctacttggaatgctctctctccaaagctgagttgtgacacaagacctctcattttgaag
acactgagtgaactattttctctggttccttccttaacagtcaatacaactgaatatgag
aattttaaagttcaagtcctcagcttcctctggactcatactcaaaacaaggacccaatt
gtagcaaatgctgcatatagatccctgtccaactttagtgcagcagaacacaccattctt
catctgcctgaaaagataagaccagaaattcccattcctgaagagttggatgacgatgaa
gatgatgaggatgtggatctttcagttcctggctcttgctatctcaaactgttgtcactc
actccccctttggttttaccagctttggaggaattctttacatcacttgtgaagcaagaa
atggtgaatatgcctcgtgggatataccactctgcattaaaaggaggtgcccgctcagac
caaggaaagactgtagcaggaatacccaattttatattgaaaatgtatgaaacaaataag
caaccaggattgaaacctggccttgcaggtggtatgttattttgctacgatgtttccatg
tatcagagtaaagatggaaaaccattgaatagactgatggccagtagagggcgaagtttc
aagcagacttcacttgctcttgtacatgaggttcatatccagctttcagagtggcaccgt
gcgattttccttccacaggcctggcttgcatacatgagtcgagcttatcatgccatttta
cagggaagactaggagagctggagttgcagttaaaacatggaaaagaagaacctgaggag
gtgcagtacaaaaagagcacagcctggctctgggttagagacatactgactgatgagatc
accaaggcagctgcaaaggagagtccggtagtgaaaggcaatgcgctgttagctctaagc
agccttgctgtcatcgtgtctagacatgaagccagcctctcctcagactctgacgggctc
ctggaggttcaacctaatttcctttcaatgaaagagtggatttccatggtacttgataca
ctcttggtcattgtggatagccattaccaacccagagggcagcttctctcctggttttat
tataagtcctattctggtgaaaacacagctagtgccattgcccgttctgctgccgccacg
gctttgtctctccttgtgccagttttcattatctcttgcaaagagaaggttgaggaaatc
ctgaacatgctgactgccaggttacctgggaaaccaagtgctgatgagtctccagccgtt
caaatccacatgggccttgctttagggatgtttctctctcgcttatgtgaagagaaactc
agtgatatatctggccaagagatgaaccttcttctgatgaagtctttggatgccctggaa
aattgctgctttgacactagtcttgaatacaacacgggctgtatattgggagttggactt
gttctgtccctcatgagccacagcagccaaatgcagtcccgcgttcacgtggcagcatcg
cttcggaagctgtctgcatacctagatgacagtgggagccagagcagaacatttcaggag
gtccttgcctacacacttagctgtgtatgtacatcagcgttcagtgctggaattattgag
gctgcagaggctgaggatgttatgaacaagcttcgactgttagtggagaatagccagcag
acttcaggttttgccctggctttaggaaacatagttcatggattgtctgtgtgtggacat
ggaaaagctgaagacttgggcagcaaactacttcctgcatggatcagaattgttcttaca
gagggcactcccacgatgctttgtctggcagctcttcacggcatggtggccttggtaggc
tctgaaggggatgtaatgcagctgaaatcagaagccatccagacctctcattttcaaggc
agacttaatgaagtcattagaaccttaactcaggtcattagtgtctctggggtgattggt
ctccagtcaaatgcaatctggcttcttggacatcttcatctatctactctatcctcaagt
caaagtagagcctctgttcctactgactatagctatttgcctgaaagcagttttattgga
gcagccattggcttcttcattacaggaggaaaaaaaggtcctgaatctgttcctccttcc
cttcttaaattagtgatgaaacccatagcaactgttggagaaagctaccaatatcctcct
gtgaactgggctgcacttctctctccacttatgaggctaaattttggtgaagagattcag
caactgtgccttgaaattatggtgacccaggcacagtcatcccagaatgcagctgcacta
ttgggcttgtgggtgacgccaccactgatccacagtctgagtctgaataccaaaagatat
ctcctgatatctgtacctctgtggataaaacacatctctgatgaacagatcctgggtttt
gttgaaaatttaatggtggcagtttttaaagcagcttccccacttggaaatcctgagcta
tgcccaagcgccttacagggtctgagccaggccatgaaactgcccagccctgcccaccac
ctctggagtctgctctctgaagctactgggaaaatttttgacctcctgccaaataagatt
cggagaaaggatctagagctgtatatcagcatagcaaaatgcctcttagaaatgacagat
gatgatgccaatcggatcgcccaggttactaagagcaacatagaaaaggctgcctttgtc
aaactgtacttagtctctcaaggacgattccccctgatgaacctgactgatatgctgagt
gttgctgtgcagcaccgtgagaaagaggtgctggcctggatgattctgcacagcttatac
caggcacggattgtgagccatgccaacacgggcgttttgaagagaatggagtggctcttg
gaactgatgggttatattagaaatgttgcttaccagtcaacatcctttcagaatatgact
cttgacgaggctttggacttcttcttgctgatatttgcaaccgcagtggttgcatgggcc
gaccacgctgcccctctcctcctcagtctcagtgccagttggttgccatggcatcaggag
aatggcccggctgggccagtaccaagcttccttggcaggagtccaatgcacaaggtcact
ctgcaggaagttctcactctgcttcccaatagcatggctctgctgctgcagaaagagcca
tggaaggaacagacccagaagttcattgactggctattcagcatcatggaaagccctaaa
gaagccctctcagcaaagtccagggatcttttgaaagccaccctgctgtccttgagagtt
ctcccagagtttaagaagaaagctgtatggaccagagcatatggttggtga
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