Rhinopithecus roxellana (golden snub-nosed monkey): 104666699
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Entry
104666699 CDS
T03989
Symbol
COL8A1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104666699 (COL8A1)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
104666699
NCBI-ProteinID:
XP_010367129
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Position
1:20237173..20389248
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AA seq
744 aa
AA seq
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MAVLPGPLQLLGVLLTISLSSIRLIQAGAYYGIKPLPPQIPPQMPPQIPQYQPLGQQVPH
MPLAKDGLAMGKEMPHLQYGKEYPHLPQYMKEIQPAPRMGKEAVPKKGKEIPLASLRGEQ
GPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGMPGAKGE
IGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRGLKGLPGPQGLRGPK
GDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGP
IGVPGVQGPPGIPGVGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPGFPGPKG
DRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG
PQGPPGPKGEPGLQGFPGKPGFLGEVGPPGMRGLPGPIGPKGEAGLKGVPGLPGVPGLLG
PKGEPGIPGEQGLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPGFPGIGKPGVAGL
HGPPGKPGALGPQGQPGLPGPPGPPGPPGPPALMPPTPPPQGEYLPDMGLGIDGVKPPHA
YGAKKGKNGGPAYEMPAFTAELTAPFPPVGAPVKFDKLLYNGRQNYNPQTGIFTCEVPGV
YYFAYHVHCKGGNVWVALFKNNEPVMYTYDEYKKGFLDQASGSAVLLLRPGDRVFLQMPS
EQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctgcctggccctctgcagctgctgggagtgctgcttaccatttccctgagc
tccatcaggctcattcaggctggtgcctactatgggatcaagccgctgccacctcaaatt
cctcctcagatgccaccacaaattccacaataccagcccctgggtcagcaagtacctcac
atgcctttggccaaagatggccttgccatgggcaaggagatgccccacttgcagtatggc
aaagagtatccgcacctaccccaatatatgaaggaaattcaaccggcgccaagaatgggc
aaggaagcagtacccaagaaaggcaaagaaataccattagccagtttacgaggggaacaa
ggtccccgtggagagcctggcccaagaggaccacctgggccccctggtttgccaggtcat
gggatacctggaattaaaggaaaaccagggccacagggatatccaggagttggaaagcca
ggtatgcctggaatgccagggaagccaggagccatgggcatgcctggggcaaaaggagaa
attggacagaaaggggaaattgggcctatggggatcccaggaccacagggacctccaggg
cctcacggacttcctggcattgggaagccaggtgggccagggttaccagggcaaccagga
ccaaagggtgatcgaggactcaaaggactaccaggacctcaaggccttcggggtcctaaa
ggagacaagggcttcgggatgccaggtgcaccaggcgtaaagggccctccagggatgcat
ggccctcccggccctgttggactgccaggagtgggcaaaccaggagtgacaggcttccct
ggaccccagggccccctgggaaagccaggggctccaggagaacctgggccacaaggccct
attggggtaccaggggttcaaggacctcctgggatacccggagttggaaagccaggccag
gatgggatcccaggccagccaggatttccaggtggcaaaggggagcaaggactgccaggg
ttaccaggacccccaggccttccagggattgggaaaccaggcttcccaggacccaaaggt
gaccggggcatgggaggtgttcctggggctcttggaccaagaggggagaaaggaccaata
ggtgccccaggaatagggggtcctccaggcgagccaggcctgcctggaatcccaggtcct
atgggccctccaggtgctattggttttcctggacccaaaggagaaggtgggattgtaggg
ccacaggggccaccaggtcccaagggtgagccagggcttcaaggcttcccaggaaagcca
ggtttccttggtgaagtagggcctcctggcatgaggggtttgccaggtcccatagggccc
aagggggaagctgggctcaaaggtgtgccaggactccctggtgttccagggcttcttgga
cctaagggagagccaggaatcccaggggagcagggtttacagggccccccaggtatccca
gggattgggggccctagtggccccattggaccacctgggattccaggccccaaaggggag
cccggcctcccagggccccctgggttccctggtatagggaaacccggagtggcaggactt
catggccccccagggaagcctggtgctcttggtcctcaaggccagcctggccttccagga
cccccaggccctccaggacccccaggacccccagccttgatgccccctacaccaccaccc
cagggagagtatctgccagatatggggctgggaattgatggtgtgaaacccccccatgcc
tacggggctaagaaaggcaagaatggagggccagcctacgagatgcctgcatttaccgcc
gagctaaccgcacctttcccaccggtgggggccccagtgaagtttgacaaactgctctat
aacggcagacagaactacaacccgcagacgggaattttcacctgtgaggtccctggtgtc
tactactttgcataccacgttcactgcaaggggggcaacgtgtgggttgctctattcaag
aacaacgagcccgtgatgtacacgtatgatgagtacaaaaagggcttcctggaccaggcg
tctgggagtgcagtgctgctgctcaggcccggagaccgggtgttcctccagatgccctca
gaacaggctgcaggactgtatgccgggcagtatgtccactcctccttttcaggatattta
ttgtatcccatgtaa
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