Rhinopithecus roxellana (golden snub-nosed monkey): 104667278
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Entry
104667278 CDS
T03989
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
104667278 (SHANK1)
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
104667278
NCBI-ProteinID:
XP_030768761
LinkDB
All DBs
Position
12:complement(110531891..110590280)
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AA seq
2159 aa
AA seq
DB search
MTHSPATSEDEERHSASECPEGGSESDSSPDGPGRGPRGTRGRGSGAPGSLASVRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGADKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGTGLTVPPALLRANSDTSMALPDWMVFSAPGASSSGAPGPTSGSQGQSQPSAPTAK
LSSGTLRSASSPRGARARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQESKQESRSDKAKRLFRHYTVGSYDSFDAPSLMDGIGPGSDYIIK
EKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMGD
FLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPPP
TISLRSKSMTSELEEMEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQTISASESPG
PGGLASLGKHRPKGFFATESSFDPHHRAQPSYERPSFLPPGPGLMLRQKSIGAAEDERPY
LAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRGGPFNPGSGG
PLPASSPASFDGPSLPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPPQPHHHHAHP
PHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSAGGGGGSSQGP
ALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPPAPSPTSPASPQP
PPAVAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEPAGGGGGGGGGSSP
SPAPAMSPVPPSPSPVPTPASPSGPATLDFTSQFGAALVGAARREGGWQNEARRRSTLFL
STDAGDEDGGDGGLGTGAAPGPRLRHSKSIDEGMFSAEPYLRLESAGSGAGYGGYGAGSR
AYGGGGGSSAFTSFLPPRPLVHPLTGKALDPASPLGLALAARERALKESSEGGGPPQPPP
RPPSPRYEAPPPPPHHHSPHAHHEPVLRLWGASPPDPARRELGYRAGLGSQEKSLPASPP
AARRSLLHRLPPTAPGVGPLLLQLGTEPPAPHPGVSKPWRSAAPEEPERLPLHVRFLENC
QPRAPATSGRGPPSEDGPGVPPPSPRRSVPPSPTSPRASEENGLPLLVLPPPAPSVDVED
GEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPDPPAPATPLPPVPPPAVAAAPPTLD
STASSLTSYDSEVATLTQGASAAPGDPPPPGPPAPAAPAPPAPQPGPDPPPGTDSGIEEV
DSRSSSDHPLETISSASTLSSLSAEGGGSAGGGAGVASGPELLDTYVAYLDGQAFGGSGT
PGPPYPPQLMTPSKLRGRALGASGGLRPGPSGGLRDPVTPTSPTVSVTGAGTDGLLALRA
CSGPPTAGVAGGPVAVEPEVPPVPLPTASSLPRKLLPWEEGPGPPPPPLPGPLAQPQASA
LATVKASIISELSSKLQQFGGSSAAGGALPWARGGSGGSGDSHHGGASYVPERTSSLQRQ
RLSDDSQSSLLSKPVSSLFQNWPKPPLPPLPTGTGVSPTAAAAPGATSPSASSSSTSTRH
LQGVEFEMRPPLLRRAPSPSLLPASEHKVSPAPRPSSLPILPSGPLYPGLFDIRGSPTGG
AGGSADPFAPVFVPPHPGISGGLGGALSGASRSLSPTRLLSLPPDKPFGAKPLGFWTKFD
VADWLEWLGLAEHRAQFLDHEIDGSHLPALTKEDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgacaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggccaggtcgaggcccccgggggacc
cggggccggggcagtggggcacctggtagcctggcctctgttagaggcctccagggccgc
tcaatgtccgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgcctgcgcttcaacccagatgccaccatctggacggccaag
cagcaggtgctctgtgccctgagcgagagcctgcaggatgtgctcaactatggcctgttc
cagccggccacctcgggccgtgacgccaacttcctggaggaggagaggttgctgcgggag
tacccccagtccttcgagaagggggtgccctacctggagttccgatacaagacccgagtt
tacaaacagaccaacctggatgagaagcagctggccaagttgcacactaagacggggttg
aagaagttcctggagtatgtgcagctcgggacatctgacaaggtggcgcgactgctggac
aaggggctggaccccaattaccatgactcggattcgggagagacccccttgacactggcg
gcccagactgaaggctctgtagaggtgattcgaaccctgtgcctgggcggggcccacatc
gacttccgggcccgggatggcatgacagcactgcataaggccgcatgcgcccgacactgc
ctggcactcacggcgctcctggaccttgggggttcccccaactacaaggaccgtcggggg
ctgacccctctgttccatacggctatggtgggtggtgacccccgatgctgtgagctgctc
ctgtacaacagggcccagctgggcatagctgatgagaacggctggcaggaaatccaccag
gcctgccagcggggtcactctcagcacctggagcatctgctcttctatggggctgagcct
ggagcccagaacgcctcagggaatacagctctgcacatctgcgccctctacaacaaggag
acctgtgccaggatcctcctgtatcgaggtgccgacaaggatgtgaagaataacaacgga
cagacgccgttccaggtggcagtgattgctgggaattttgagctgggggagctgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcggcccggcga
cgggggcccccgggcacagggctgacagtgcccccagcgctgctgcgggccaacagtgac
accagcatggcgctgcccgactggatggtgttctccgccccgggggcctcgtcctctggg
gcccctggccctacctcagggtcccagggccagtcgcagccctcggcccccaccgccaag
ctcagcagcgggaccctccgaagtgccagcagcccccggggtgccagggcccgctctcca
tcccgagggaggcaccctgaggacgccaagaggcagccccgaggccggcccagctccagc
gggacaccccgggaagggccagccgggggcacggggggctcagggggccccgggggctcc
ctgggcagccgcgggaggcggaggaagctctactcagcagtacccgggcgctccttcatg
gctgtgaagtcgtaccaggcccaagccgagggggagatctccctgagcaagggcgagaag
atcaaagtacttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggttcccgtctgactgcctggaagaggtggccaatcgctctcaggagagtaagcaa
gaaagccgcagtgacaaggcaaagagactcttccggcattataccgtgggctcctacgac
agctttgatgccccaagcttaatggatgggattggcccagggagcgattacatcattaag
gaaaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccggggg
gccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctgcag
tatctggagtcggtggacgagggtggcgtggcatggcgagctggactacgaatgggagat
ttcctcatcgaggtgaacgggcagaatgtggtgaaggtcggccaccgacaggtggtgaac
atgatccgccaagggggcaacacgctgatggtgaaggtggtgatggtcaccaggcacccg
gacatggatgaggcagtgcacaagaaagcaccccagcaggccaagcggctgccaccccca
accatctccctgcgttccaaatctatgacctcagagctggaggagatggagtacgagcag
cagccggcgccggtgcccagcatggagaaaaagcggaccgtgtatcagatggctctcaac
aaactggacgaaatcctggccgcggctcaacagaccatcagtgcaagcgagagccctggg
cccggtggcctcgcgtccctgggcaaacaccgacccaaaggcttctttgccactgagtcg
agcttcgatccccaccaccgtgcccagccaagttacgagcgtccttctttcctgcctcca
ggacctgggctgatgctccggcaaaaatctatcggggcggcagaagatgagagaccttac
ctagcacccccagccatgaaattcagccgcagcctgtctgtgcctggttcggaggacatt
cccccgccacccaccacgtccccaccggagcccccctatagcacacctccagccccctcc
tcctcagggcgcctcaccccctcccctcggggagggcccttcaaccccggctctggtggc
cccctccccgcctcctcccctgcatcctttgacgggccctcccttcccgacacccgcgtg
gggagccgcgagaagagcctgtaccacagcgggcccctgccccctgcccaccaccacccg
ccccaccaccaccaccaccacgccccgcccccccagccccaccaccaccacgcccaccct
cctcatcctccggagatggagacaggtggctctcccgacgaccctccaccccgcctagct
ctggggccccagcccagcctgcgaggctggaggggcggcgggcccagcccgaccccgggg
gctccgtccccgtcccatcacggcagcgcaggcgggggcggcggctcctcccagggcccg
gctctgcgctatttccagctgcccccgcgggcggccagcgcagccatgtacgtgcccgcc
cgctcgggccgcggccgcaagggcccgctggtcaagcagaccaaggtggaaggcgagccc
cagaagggcggcggcctcccgcctgcgccgtcgcccacgtccccggcctccccgcagccg
ccgcccgcagtggccgcgccctcggagaagaactccatccccatccccaccatcatcatc
aaggccccgtccaccagtagcagcggccgcagcagccagggcagcagcaccgaggcggag
ccccccacccagcccgagcctgcgggaggcggcggcggcggcggcggcggctcctctccc
agccccgccccggccatgtcgcccgtgccgccgtccccctcgcccgtgcccacccccgcc
tcgcccagcggcccggccacgctggacttcaccagccagttcggggccgccctggtgggg
gcggcccggagggaggggggctggcagaatgaggcgcgccggcgctccacgctgttcctt
tccaccgacgcgggggacgaggacggcggagacggcgggctgggcacaggggcggccccg
ggcccgcggctgcgccactccaaatccatcgacgagggcatgttctccgccgagccctac
ctccgactggagtctgcgggcagcggcgcgggctacggcggctacggggccgggagccga
gcctacgggggtggcgggggcagcagcgccttcaccagcttcctgcccccgcgacccctg
gtgcacccgctgaccggcaaggccctggatcccgcctccccgctggggctggccttggcc
gcccgcgagcgagcgctgaaggagtcctcggagggcggtgggcccccccagccccctcct
aggcccccatcgccccgctacgaggccccgccgccccctccgcaccaccactcgccccac
gcccaccacgagccagtgctgcgtctctggggggcctccccgccggatcccgcgcgccgg
gagctggggtacagggccgggctgggcagccaggagaagtcccttcccgccagcccgccc
gccgcccggcgttccctgctacaccgcctgccgcccaccgctcccggggtggggcccctc
ctgctgcagctggggacggagcccccggccccgcatcctggagtgagcaagccctggagg
tccgcagcccccgaagagcccgagcggctgccgctgcacgtgcggttccttgaaaactgc
cagccccgggcccctgcgacgagcggaaggggccccccctcggaggacggacccggggtc
ccgccgcccagcccacgccggtccgtgcccccctccccgacctccccgagggccagcgaa
gagaacgggctgccactgctggttctgccgccgcccgccccctcggtggatgtggaagat
ggcgaattccttttcgtggaaccgctgcctccgcccctggaattctccaacagcttcgaa
aagccggagtcgcccctcacgcctgggcctccccacccgttgcccgacccacctgccccg
gccaccccgttaccccctgtgccacccccggctgtggccgcagcccctcccaccctggac
tccaccgcatccagcctgacatcctatgacagcgaggtggccaccctgacccagggggcc
tccgccgcccctggggacccccctccaccaggcccgcctgccccagcagcaccggctccc
cctgccccacagcccggcccggaccctccgcctggcacggattctggcattgaggaggtg
gacagtcggagcagcagtgaccacccgctggagaccatcagcagtgcctccacgctgagc
agtctatctgctgaaggtggtggcagcgcagggggtggggccggtgtggccagtgggccg
gagcttctggacacctatgtggcctacctggacggccaggcctttgggggcagcggcact
cccggcccgccataccctcctcagctcatgactccctctaagctccggggtcgggcacta
ggagccagcggaggcctgaggcctggccccagtgggggactccgagaccctgtcaccccc
accagccccaccgtctcggtgacaggggctggaaccgatgggctgctggccttgcgtgct
tgttcaggaccccccacggcaggcgtggctgggggtccagtggctgtagagccagaagtc
ccaccggtgcccttgccgacggcctcctctctgcctcggaagctgctgccctgggaagag
ggcccaggcccaccgccaccacctctgcccggtcccctggcccagcctcaggcctcagcc
ttggccacagtaaaagccagcatcatcagtgaactcagctccaagcttcagcagtttggg
ggctcctcggcagctggtggcgctctgccctgggcccgaggaggcagcgggggaagtgga
gacagccaccatgggggagccagctacgtcccggagaggacctcctccctgcagcggcag
agactctccgacgactcccagtcctcactcctctccaagcctgtcagcagcctgtttcag
aactggcccaaaccacctctgccaccgctccccaccggaacaggggtctcccctacagcc
gctgcggccccaggggccacctcaccctcggcctcctcctcctccacgtccacccgccac
ctccagggcgtggagttcgagatgcggccccctctgctccgccgggcccccagcccctcg
ctgctgcccgcctcggagcacaaggtcagccctgcgcccaggccctcgtccctgcccatc
ctgccttctggacccctctacccaggcctctttgacatccgtggctccccaactggaggg
gcaggaggctccgctgaccccttcgccccagtctttgtgccgccacacccgggtatatcc
ggggggctcgggggagccttgtcaggggcctcgcgctccctctcaccgacccgcctgctc
tcgctgcccccggacaagccgtttggcgctaaacctctggggttctggaccaagttcgac
gtggctgattggctagagtggctgggtttggcggagcaccgagcccagttcctggaccat
gagatcgatggctcccacctgcccgccttgaccaaggaggactatgtcgatctaggtgtg
accagggtgggccaccgcatgaacatcgaccgggctctcaaattcttcctggagaggtga
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