Rhinopithecus roxellana (golden snub-nosed monkey): 104667715
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Entry
104667715 CDS
T03989
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X5
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04612
Antigen processing and presentation
rro05145
Toxoplasmosis
rro05152
Tuberculosis
rro05164
Influenza A
rro05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
104667715 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104667715 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
104667715 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
104667715 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
104667715 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
rro01001
]
104667715 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
rro04054
]
104667715 (CIITA)
Enzymes [BR:
rro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104667715 (CIITA)
Protein kinases [BR:
rro01001
]
Serine/threonine kinases: Other
TAF1 family
104667715 (CIITA)
Pattern recognition receptors [BR:
rro04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104667715 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
LRR_9
Motif
Other DBs
NCBI-GeneID:
104667715
NCBI-ProteinID:
XP_010368549
UniProt:
A0A2K6PQ54
LinkDB
All DBs
Position
20:78282449..78343059
Genome browser
AA seq
1131 aa
AA seq
DB search
MRCLAPHPAGSYLSEPQGSSQCATMELGPLEGSYLELLNSDADPLCLYHIYDQMDLAGEE
EIELYSEPDTDTINCDQFSRLLCDMEGDEETKEAYANIAELDQYVFQDSQLEGLSKDIFI
EHIGPDEVIGDSMEMPAEVGQKSQKRPFPEELPADLKHWKPAEPPAVVTGSFLVGPVSSS
STLPCLPLPALFNQEPASSRMCLEETHQMPMPSSSSSLSCLNLPEGPVQFVPTVSTLPQG
LWQISGTGTGVSSIFIYHGEVPQASQVPPPSGLTVHGLPTSPDRPGSTSPFAPSATDLPS
MPEPALTSRANVTEHKTSPTQCQAAGEVSNKLPKWPEPVEQFYRSLQDTYQAEPAGPDGI
LMEVDLVQARLERSSSKSLERELATPDWAERQLAQGGLAEGLLAAKERRRPRETQVIAML
GKAGQGKSYWAGAVSRAWACGRLPQYDFVFSVPCHCLNRPGDVYRLQDLLFSLGPRPLLA
ADEVFSHIMKRPDRVLLILDAFEELEAQDGFLHSTCGPAPAEPCSLRGLLAGLFQKKLLR
GCTLLLTARPRGRLVQNLSKADALFELSGFSMEQAQAYVMRYFECSGMTEHQDRALALLR
DRPFLLSHSHSPTLCRAVCQLLEALLELGEDAELPSTLTGLYVGLLGRAALSGPPGALAE
LAKLAWELGRRHQSTLQEDQFPSADVRTWAMAKGLVQHPPGATESELAFPSFLLQCFLGA
LWLTLSGEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLTGLIFQPRARCLGALVGPSVT
ALADRKQKVLARYLKRLQPGTLRARQLLELLHCTHEAEEAGIWQHVVQELPARLSFLGTR
LMPPDAHVLGKALEAAGQDFSLDLRSTGIDPSGLGSLVGLSCVTHFRAALSDTVALWESL
RQHGQTELLQAAEEKFTIEPFKAKSLKDVEDLGKLVQTQRTRSSSEDTAGELPAVRDLKK
LEFALGPISGPQAFPKLVQILTAFSSLQHLDLDALSENKIGDEGVSQLSATFPQLKSLET
LNLSQNSITDLGAYKLAEGLPSLAASLLRLSLYNNCICDMGAESLARVLPDMVSLRVMDV
QYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFSVQEHLQQQDSRISLR
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacacccggctgggtcctacctgtcagagccccaaggcagctca
cagtgtgccaccatggagttggggcccctagaaggcagctacctggagcttctcaacagc
gatgctgaccccctgtgcctctaccacatctatgaccagatggacctggctggagaagaa
gagattgagctctactcagaacccgacacggacaccatcaactgcgaccagttcagcagg
ctgttgtgtgacatggaaggcgatgaagagaccaaggaggcttatgccaatatcgcggaa
ctggaccagtatgtgttccaggactcccagctggagggcctgagcaaagacattttcata
gagcacataggaccagatgaagtgatcggtgacagtatggagatgccagcagaagttggg
cagaaaagtcagaaaagacccttcccagaggagcttccggcagacctgaagcactggaag
ccagctgagcccccagctgtggtgactggcagtttcctagtgggaccagtgagcagctcc
tccaccctgccctgcctgccactgcctgctctgttcaaccaggagccagcctccagccgg
atgtgcctggaggaaacccatcagatgcccatgccttcctctagttcctcgttgagctgc
ctgaatctccctgagggacccgtccagtttgtccccaccgtctccactctgccccagggg
ctctggcaaatctctgggactggaacaggggtctccagtatattcatctaccatggtgag
gtgccccaggccagccaagtaccccctcccagtggactcactgtccatggcctcccgaca
tctccagaccgaccaggctccaccagccccttcgctccatcagcaactgacctgcccagc
atgcctgaacctgccctgacctcccgagcaaacgtgacagagcacaagacgtcccccacc
caatgccaggcagctggagaggtctccaacaagcttccaaaatggcctgagccggtggag
cagttctaccgctcactgcaggacacgtatcaggccgagcctgcaggccccgatggcatc
ctgatggaggtggacctggtgcaggccaggctggagaggagcagcagcaagagcctggag
cgggaactggccaccccggactgggcagaacggcagctggcccaaggaggcctggctgag
gggctgctggctgccaaggagcgccggaggccgcgtgagacacaagtgattgctatgctg
ggcaaagctggtcagggcaagagctattgggctggggcagtgagccgggcctgggcttgt
ggccggcttccccaatacgactttgtcttctctgtgccctgccactgcttgaaccgtccg
ggggatgtctaccgcctacaggacctgctcttctccctgggcccacggccactcctggca
gccgatgaggttttcagccacatcatgaagagacctgaccgcgttctgctcatcctagat
gcctttgaggagctggaagcgcaagacggcttcctgcacagcacatgtggacccgcaccg
gctgagccctgctccctccggggactgctagctggccttttccagaagaagctgctccga
ggttgcaccctcctcctcacagcccggccccggggtcgcctggtccagaacctgagcaag
gccgacgccctgtttgagctgtccgggttctccatggagcaggcccaagcctatgtgatg
cgctactttgagtgctcagggatgaccgagcaccaagacagagccctggcactcctccgg
gaccggccatttcttctcagtcacagccatagccccactttgtgccgggcagtgtgccag
ctcttagaggccctactggagcttggggaggacgccgagctgccctccacgctcacggga
ctctatgtcggcctgctgggccgtgcagccctcagcggccccccgggggccctggcagag
ctggccaagttggcctgggagctgggccgcagacaccaaagtaccctacaggaggaccag
ttcccatctgcagacgtgaggacctgggcgatggccaaaggcttagtgcaacacccccca
ggggccacagagtccgagctggccttccccagcttcctcctgcagtgcttcctgggggcc
ctgtggctgactctgagtggtgaaatcaaggacaaggagctcccgcagtatctagcattg
accccaaggaagaagaggccctatgacaactggctggagggcgtgccacgctttctgact
gggctgatcttccagcctcgcgcccgctgcctgggagccctagttgggccatcggtgact
gccttggcggacaggaagcagaaggtgctagcaaggtacttgaagcggctgcagccgggg
acactgcgggcgcggcagctgctggagctgctgcactgcacccacgaggctgaggaggct
ggaatttggcagcacgtggtgcaggagctccccgcccgcctctcttttctgggcacccgt
ctcatgcctcccgatgctcatgtattgggcaaggccttggaggcggcaggccaagacttc
tccctggacctccgcagcactggcattgacccctctggattggggagcctcgtgggactc
agctgtgtcacccatttcagggctgccttgagtgatacagtggcgctgtgggagtccctg
cggcagcatgggcagactgagctacttcaggcagcagaggagaagttcaccattgaacct
ttcaaagccaagtccctgaaggatgtggaagacctgggaaagcttgtgcagactcagagg
acaagaagttcctcggaagacacagctggggaactccctgctgttcgggacctaaagaaa
ctggagtttgcgctgggccccatctcaggcccccaggctttccccaaactggtgcagatc
ctcacggccttttcctccctgcagcatctggacctggatgcactgagtgagaacaagatc
ggggacgagggtgtctcgcagctctcagccaccttcccccagctgaagtccctggaaacc
ctcaacctgtcccaaaacagcatcactgacctgggtgcctacaaacttgctgagggcctg
ccttcactcgctgcatccctactcaggctaagcttgtacaataattgcatctgcgacatg
ggagccgagagcctggctcgtgtgcttccggacatggtgtccctccgggtgatggacgtt
cagtacaacaagttcacggctgccggggcccagcagctcgctgccagccttcggaagtgt
cctcacgtggagacgctggcgatgtggacgcccaccatcccattcagtgtccaggaacac
ctgcaacaacaggattcacggatcagcctgagatga
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