Rhinopithecus roxellana (golden snub-nosed monkey): 104668793
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Entry
104668793 CDS
T03989
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04518
Integrin signaling
rro04820
Cytoskeleton in muscle cells
rro04974
Protein digestion and absorption
rro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104668793 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104668793 (COL9A1)
04518 Integrin signaling
104668793 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104668793 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104668793 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104668793 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
104668793 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rro00535
]
104668793 (COL9A1)
Proteoglycans [BR:
rro00535
]
Extracellular matrix (ECM) proteoglycans
Others
104668793 (COL9A1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_3
Laminin_G_2
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
104668793
NCBI-ProteinID:
XP_030785463
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All DBs
Position
4:complement(82249581..82346103)
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AA seq
946 aa
AA seq
DB search
MKTCWKIPVFFFVCSFLEPWASAAVKRRPRFPANSNSNGENELCPKIRIGQDDLPGFDLI
SQFQVDKAASRRAIQRVVGSATLQVAYKLGNNVDFRIPTRNLYPSGLPEEYSFLTTFRMT
GSTLKKNWNIWQIQDSSGKEQVGIKINGQTQSVAFSYKGLDGSLQTAAFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGPIDTDGFAVLGKLADNPQVSVPFELQWMLI
HCDPLRPRRETCHELPARITPSQTTDERGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPAGEAGKPGAPGKPGTPGADGLTGPDGSPGSVGPKGQKGEPGVPGSRGFPVSYKT
LQMNKICKLSCCDAPLYELRASGIPGPPGPPGTAGLPGELGRVGPVGDPGRRGRPGPPGP
PGPSGTIGFHDGDPLCPNACPPGRSGYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGE
LGEVGAQGPPGAQGLRGTTGIVGDKGEKGARGLDGEPGPQGLPGAPGDQGQRGPPGEAGP
KGERGAQGARGIPGLPGPKGDTGLPGVDGRDGIPGMPGTKGEPGKPGPPGDAGLQGLPGV
PGIPGAKGVAGEKGSTGAPGKPGPMGNSGKPGQQGPPGEVGPRGPRGLPGSRGELGPVGS
PGLPGKLGSLGSPGLPGLPGPPGLPGMKGDRGVVGEPGPKGEQGASGEEGETGERGELGD
IGLPGPKGSAGNPGEPGLRGPEGSRGLPGVEGPRGPPGPRGVQGEQGATGLPGVQGPPGR
APTDQHIKQVCMRVIQEHFAEMAASLKRPDSGASGLPGRPGPPGPPGPPGENGFPGQMGM
RGLPGVKGPPGALGLRGPKGDLGEKGERGPPGRGPKGLPGAVGLPGDPGPASYGRNGRDG
ERGPPGVAGIPGVPGPPGPPGLPGFCEPASCTMQAGQRAFSKGPDP
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttgctggaaaattccagttttcttctttgtgtgcagtttcctggaaccctgg
gcatctgcagctgtcaagcgtcgccccagattccctgccaattccaattctaatggtgaa
aatgaactctgtcctaagatcaggattggccaagatgacttaccagggtttgatctgatc
tctcagttccaggtagataaagcagcatctagaagagctatccagagagtagtgggatca
gctacattgcaggtggcttacaagttgggaaataatgtagacttcaggattccaactagg
aatttatatcccagtggactgcctgaagaatactccttcttgacgacgtttcgaatgact
ggaagcacactcaaaaagaactggaacatttggcagattcaggattcctctgggaaggaa
caagttggcataaagattaatggccaaacacaatctgttgcattttcatacaagggactg
gatggaagtctccaaacagcagctttttcgaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggagaggagtagtgctactctttttgttgactgcaacagg
attgaatctttacctataaagccaagaggcccaattgacaccgatggctttgccgtgctg
ggaaaacttgcagataatcctcaagtttctgttccatttgaacttcaatggatgctgatc
cattgtgaccccctgcggcccaggagagaaacttgccatgagctgccagccagaataacg
cccagccagaccaccgacgagagaggtcccccgggcgagcagggtcctccagggcctccg
ggcccccctggagttccgggcatagacggcatcgacggtgaccgaggtcctaagggcccc
ccaggccccccgggtcctgcaggtgaagcgggaaagccaggagctccaggcaagcctggc
acacctggcgctgatggattaacaggacctgatggatcccctggctctgttgggccaaag
ggacaaaaaggagaacctggtgtgcctggatctcgtggatttccagtttcctataaaacg
ctacaaatgaataaaatctgtaaactctcctgttgtgatgcacctctttatgagttacgg
gccagtggtattcctggaccccctggtcctcctgggacagcaggactccctggagagctt
ggccgtgtgggacctgttggtgaccctgggagaagaggacgacccggcccccctggcccc
ccaggacccagtggaacaattggctttcatgatggagatccattgtgtcccaatgcctgt
ccaccaggtcgctcaggatatccaggcctaccaggcatgaggggtcataaaggagctaaa
ggagaaattggtgaaccaggaagacaaggacacaagggtgaagaaggtgaccagggagaa
ctgggagaagttggagctcaaggacctccaggagcccagggtttgcgaggcaccactggc
atagttggagacaaaggggaaaaaggtgctcggggcttagatggcgaacctgggcctcag
ggtcttcctggtgcacctggtgatcaaggacagcgaggacctccaggagaagcgggtccc
aaaggagaaagaggggctcaaggtgctagaggaattcctggtcttcctgggcccaaagga
gacacgggtttgccaggtgtggatggccgtgatgggatccctggaatgcctggaacaaag
ggtgaaccaggaaaacctgggcctcctggtgatgcaggattgcaggggttaccaggtgta
cctggaattcctggtgcaaaaggtgttgctggtgaaaagggtagtacaggtgctccaggg
aagcctggtccgatgggaaattcaggcaaaccgggccaacaggggcctccaggagaggtg
ggacccagaggaccccgggggcttcctggcagtagaggagaattaggaccagtgggatcc
ccaggcctaccaggtaaactgggttctctgggtagccccggcctccctggcttgcctggg
ccccctggacttcctggaatgaaaggtgacaggggtgtagtcggtgaaccgggtccaaag
ggtgaacagggtgcctctggtgaagaaggtgaaacaggagaaaggggggaacttggagat
ataggattacctggcccaaagggatctgcaggtaatcctggagagcctggcttgagaggg
cctgagggaagtcgggggcttcctggagtggaaggaccaagaggaccacctggaccccgg
ggcgtgcagggagaacagggtgccaccggcctgcctggtgtccagggccctccgggtaga
gcaccgacagatcagcacattaagcaggtttgcatgagagtcatacaagagcattttgct
gagatggctgctagtcttaagcgtccagactcgggtgcctctgggctccctggaaggcct
ggccctcctggtccccctggccctcctggagagaatggtttcccaggccagatgggaatg
cgtggccttccaggcgttaaagggccccctggtgcccttggtttgaggggacctaaaggt
gacttgggagaaaagggggagcgtggccctccaggaagaggtcccaaaggtttgcctgga
gctgtaggtctcccaggtgacccaggccctgccagctatgggagaaatggccgagacggt
gaacgaggcccccccggggtggcaggaattcctggcgtgcctggacccccgggacctcct
gggcttcccggtttctgtgagccagcctcctgcaccatgcaggctggtcagcgagcattt
agcaaagggcctgacccgtga
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