KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104669119
Entry
104669119         CDS       T03989                                 
Symbol
PTCH1
Name
(RefSeq) protein patched homolog 1 isoform X1
  KO
K06225  patched 1
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04024  cAMP signaling pathway
rro04340  Hedgehog signaling pathway
rro04360  Axon guidance
rro05200  Pathways in cancer
rro05205  Proteoglycans in cancer
rro05217  Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:rro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    104669119 (PTCH1)
   04024 cAMP signaling pathway
    104669119 (PTCH1)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    104669119 (PTCH1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    104669119 (PTCH1)
   05205 Proteoglycans in cancer
    104669119 (PTCH1)
  09162 Cancer: specific types
   05217 Basal cell carcinoma
    104669119 (PTCH1)
SSDB
Motif
Pfam: Sterol-sensing Patched
Other DBs
NCBI-GeneID: 104669119
NCBI-ProteinID: XP_030775762
LinkDB
Position
16:84867484..84941090
AA seq 1450 aa
MASAGNVAEPQDRGGGGSGCIGAPGRPAGGGRRRRTGGLRRAAAPDRDYLHRPSYCDAAF
ALEQISKGKATGRKAPLWLRAKFQRLLFKLGCYIQKNCGKFLVVGLLIFGAFAVGLKAAN
LETNVEELWVEVGGRVSRELNYTRQKIGEEAMFNPQLMIQTPKEEGANVLTTEALLQHLD
SALQASRVHVYMYNRQWKLEHLCYKSGELITETGYMDQIIEYLYPCLIITPLDCFWEGAK
LQSGTAYLLGKPPLRWTNFDPLEFLEELKKINYQVDSWEEMLNKAEVGHGYMDRPCLNPA
DPDCPATAPNKNSTKPLDMALVLNGGCHGLSRKYMHWQEELIVGGTVKNSTGKLVSAHAL
QTMFQLMTPKQMYEHFKGYEYVSHINWNEDKAAAILEAWQRTYVEVVHQSVTQNSTQKVL
SFTTTTLDDILKSFSDVSVIRVASGYLLMLAYACLTMLRWDCSKSQGAVGLAGVLLVALS
VAAGLGLCSLIGISFNAATTQVLPFLALGVGVDDVFLLAHAFSETGQNKRIPFEDRTGEC
LKRTGASVALTSISNVTAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSMDL
YRREDRRLDIFCCFTSPCVSRVIQVEPQAYTDTRDNTRYSPPPPYSSHSFAHETQITMQS
TVQLRTEYDPHTHVYYTTAEPRSEISVQPVTVTQDTLSCQSPESTSSTRDLLSQFSDSSL
HCLEPRCTKWTLSSFAEKHYAPFLLKPKAKVVVIFLFLGLLGVSLYGTTRVRDGLDLTDI
VPRETREYDFIAAQFKYFSFYNMYIVTQKADYPNIQHLLYDLHRSFSNVKYVMLEENKQL
PKMWLHYFRDWLQGLQDAFDSDWETGKIMPNNYKNGSDDGVLAYKLLVQTGNRDKPVDIS
QLTKQRLVDADGIINPSAFYIYLTAWVSNDPVAYAASQANIRPHRPEWVHDKADYMPETR
LRIPAAEPIEYAQFPFYLNGLRDTSDFVEAIEKVRTICSNYTSLGLSSYPNGYPFLFWEQ
YIGLRHWLLLFISVVLACTFLVCAIFLLNPWTAGIIVMVLALMTVELFGMMGLIGIKLSA
VPVVILIASVGIGVEFTVHVALAFLTAIGDKNRRAVLALEHMFAPVLDGAVSTLLGVLML
AGSEFDFIVRYFFAVLAILTILGVLNGLVLLPVLLSFFGPYPEVSPANGLNRLPTPSPEP
APSVVRFAMPPSHMHSGSDSSDSEYSSQTTVSGLSEELRHYEAQPGAGGPAHQVIVEATE
NPVFAHSTVVHPESRHHQPSNPRQQPHLDSGSLPPGRQGQQPRRDLPREGLWPPPYRPRR
DAFEISTEGRSGPSNRDRWGSRGARSHNPRSPASTAMGSSVPGYCQPITTVTASASVTVA
VHPPPVPGPGRNPRGGLCPGYEGYPETDHGLFEDPHVPFHVRCERRDSKVEVIELQDVEC
EERPRGSSSN
NT seq 4353 nt   +upstreamnt  +downstreamnt
atggcctcggctggtaacgtcgccgagccccaggaccgcggcggcggcggcagcggctgc
atcggtgccccgggccggccggctggaggtgggaggcgcagacgtacgggggggctgcgc
cgtgctgccgcgccggaccgggactatctgcaccggcccagctactgcgacgccgccttc
gctctggagcagatttccaaggggaaggctactggccggaaagcgccgctgtggctgaga
gcgaagtttcagagactcttatttaaactgggttgttacattcaaaaaaactgcggcaag
ttcttggttgtgggcctcctcatatttggggccttcgcggtgggattaaaggcagcgaac
ctcgagaccaacgtggaggagctgtgggtggaagttggaggacgagtaagtcgtgaatta
aattatactcgccagaagattggagaagaggctatgtttaatcctcaactcatgatacag
acccctaaggaagaaggtgctaacgtcctgaccacagaagcactcctgcagcacctggac
tccgcgctccaggccagccgtgtccacgtatacatgtacaacaggcagtggaaattggaa
catttgtgttacaaatcaggagagcttatcacagaaacaggttacatggatcagataata
gagtatctttacccttgtttgattattacacctttggactgcttctgggaaggggcgaaa
ttacagtctgggacagcgtacctcctaggtaaacctcctttgcggtggacaaacttcgac
cctttggaattcctagaagagttaaagaaaataaactatcaagtggacagctgggaggaa
atgctgaataaggctgaggttggtcatggttacatggaccgcccctgcctcaatccggcc
gatccagactgccccgccacagcccccaacaaaaattcaaccaaacctcttgatatggcc
cttgttttgaatggtggatgtcatggcttatccagaaagtatatgcactggcaggaggag
ttgattgtgggtggcacagtcaagaacagcactggaaaactcgtcagcgcccatgccctg
cagaccatgttccagttaatgactcccaagcaaatgtacgagcacttcaaggggtacgag
tatgtctcacacatcaactggaatgaggacaaggcggcagccatcctggaggcctggcag
aggacatatgtggaggtggttcatcagagtgtcacacagaactccactcagaaggtgctt
tccttcaccaccacgaccctggacgacatcctgaagtccttctctgacgtcagtgtcatc
cgcgtggccagcggctacttactcatgctcgcctatgcctgtctaaccatgctgcgctgg
gactgctccaagtcccagggtgccgtggggctggctggcgtcctgctggttgcactgtca
gtggctgcaggactgggcctgtgctcattgatcggaatttcctttaacgctgcaacaact
caggttttgccatttcttgctcttggtgttggtgtggatgatgttttccttctggcccac
gccttcagtgagaccggacagaataaaagaatcccttttgaggacaggaccggggagtgc
ctgaagcgcacaggagccagcgtggccctcacgtccatcagcaacgtcacagccttcttc
atggccgcgttaatcccgattcctgctctgcgggcgttctccctccaggcggcggtagta
gtggtgttcaattttgccatggttctgctcatttttcctgccattctcagcatggattta
tatcgacgtgaggacaggagactggatattttctgctgttttacaagcccctgcgtcagc
agagtgattcaggttgaacctcaggcctacaccgacacgcgcgacaatacccgctacagc
cccccacccccctacagcagccacagctttgcccatgaaacgcagattactatgcagtcc
actgtccagctccgcacggagtacgacccccacacacacgtgtactacaccacggccgag
ccgcgctccgagatctccgtgcagcccgtcaccgtgacacaggacaccctcagctgccag
agcccggagagcaccagctccacaagggatctgctctcccagttctccgactccagcctc
cactgcctcgagccccgctgtaccaagtggacgctctcatcttttgctgagaagcactat
gctcctttcctcttgaaaccaaaagccaaggtagtggtgatcttcctttttctgggcttg
ctgggggtcagcctttatgggactacccgagtgagagacgggctggaccttacggacatt
gtacctcgggaaaccagagaatatgactttattgctgcacagttcaaatacttttctttc
tacaacatgtatatagtcacccagaaagcagactacccgaatatccagcacttactttac
gaccttcacaggagtttcagtaacgtgaagtatgtcatgttagaagaaaacaaacagctt
cccaaaatgtggctgcactacttcagagactggcttcaaggacttcaggatgcatttgac
agtgactgggaaaccgggaaaatcatgccaaacaattacaagaacggatcagacgatgga
gtccttgcctacaaactcctggtgcaaaccggcaaccgcgataagcccgtcgacatcagc
cagttgactaaacagcgtctggtggatgcagatggcatcattaatcccagcgctttctac
atctacctgacggcttgggtcagcaatgaccctgtcgcgtatgctgcctcccaggccaac
atccggccgcaccgaccggaatgggtccacgacaaagccgactacatgcctgaaacaagg
ctgagaatcccggcagcagagcccatcgagtatgcccagttccctttctacctcaacggc
ttgcgggacacctcagactttgtggaggcgattgaaaaagtaaggaccatttgcagcaac
tatacgagcctggggctgtccagttaccccaacggctaccccttcctcttctgggagcag
tacatcggcctccgccactggctactgctattcatcagcgtggtgctggcctgcacgttc
ctcgtgtgcgccatcttccttctgaacccctggacggccgggatcattgtgatggtcctg
gcactgatgacggtcgagctctttggcatgatgggcctcatcggaatcaagctcagcgcc
gtgcccgtggtcatcctgatcgcttctgttggcataggagtggagttcaccgttcacgtt
gctttggcctttctgacggccatcggtgacaagaaccgcagggctgtgcttgccctggag
cacatgtttgcgcccgtcctggacggggctgtgtccactctcctgggagtgctgatgctt
gcgggatctgagttcgacttcattgtcaggtatttctttgctgtactggcgatcctcacc
atcctcggcgttctcaacgggctggttttgcttcccgtgcttttgtctttctttggacca
tatcctgaggtgtctccagccaacggcttgaaccgcctgcccacaccctcccctgagcca
gcccccagcgtggtccggttcgccatgccccccagccacatgcacagcgggtctgattcc
tccgactcggagtatagttcccagacgacagtgtcaggcctcagcgaggagcttcggcac
tacgaggcccagccgggcgcgggaggccctgcccaccaagtgatcgtggaagccacagaa
aaccccgtcttcgcccactccaccgtggtccatcccgaatccaggcatcaccaaccctcg
aacccacgacagcagccccacctggactcagggtccctgcctcccggacggcaaggccag
cagccccgcagggacctccccagagaaggcttgtggccacccccgtacagaccgcgcaga
gacgcttttgaaatttctactgaagggcgttctggccctagcaatagggaccgctggggc
tcccgcggggcccgttctcacaaccctcggagcccagcgtccactgccatgggcagctcc
gtgcccggctactgccagcccatcaccactgtgacggcgtctgcctccgtgactgtcgcc
gtgcacccaccgcctgtccccgggcctgggcggaacccccgaggagggctctgcccgggc
tacgagggctaccccgagacggaccatggcctgttcgaggacccccacgtgcctttccat
gtccggtgtgagaggagggattcgaaagtggaagtcattgagctgcaggacgtggagtgt
gaggagaggccccggggaagcagctccaactga

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