Rhinopithecus roxellana (golden snub-nosed monkey): 104669236
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Entry
104669236 CDS
T03989
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104669236 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104669236 (BARD1)
04121 Ubiquitin system [BR:
rro04121
]
104669236 (BARD1)
03036 Chromosome and associated proteins [BR:
rro03036
]
104669236 (BARD1)
03400 DNA repair and recombination proteins [BR:
rro03400
]
104669236 (BARD1)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104669236 (BARD1)
Ubiquitin system [BR:
rro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104669236 (BARD1)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104669236 (BARD1)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104669236 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank_4
Ank_2
Ank
Ank_3
Ank_5
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
ANK_LRRK2
Ank_KRIT1
zf-C3HC4_2
Siva
zf-C3HC4_3
DUF5523
Motif
Other DBs
NCBI-GeneID:
104669236
NCBI-ProteinID:
XP_010370457
LinkDB
All DBs
Position
14:34916271..35002083
Genome browser
AA seq
771 aa
AA seq
DB search
MPDNRQRRNRQPRVRSGNEPRSAPAMEPDGRGAWAHSRAALDRLEKLLRCSRCANILREP
VCLGGCEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKL
SDLKEDDPRRSLFNDAENKKNSIKMWFSPRSKKVRYVVSKVSVQTQPAIKKDANAQQDSY
EFVSTSPPADVSERAKKASARSRKKQKKKTLAEINQKWNLEAEKEDGEFDSKEESKQKLV
SFCSQPSIISSPQINGEIDLLASGSLTESECFGSLTEVSLPLAEQIESPDTKSRNEVVTP
EKVCKNYLASKKSLPLENNGKHDHHNRLSSPISKRCRTSILSTSGDFVKQTMPSENTPLP
SCKRKVGGTSGRKNSNLSDEFSSLSPGTPPSTLNSSSYRRVMSSPSAVKLLPNMAVKRNH
RGETLLHIASIKGDIPSIEYLLQNGSDPNVKDHAGWTPLHEACSHGHLKVVELLLQHKAL
VNTTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDCTDDENMKSLLLLP
EKNESSTTSHCLVMNTGQRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCTEFDSTVTH
VVVPGDAVQSTLKCMLGILNGCWILKFEWVKACLRRKVCEQEEKYEIPEGPHRSRLNREQ
LLPKLFDGCYFYLGGSFKHHPKDNLIKLVTAGGGQILSRKPKPDSDVTQTINTVAYHARP
DSDQRFCTQYIIYEDLSNYHPERVRQGKVWKAPSSWFIDCVMSFELLPLDS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgccggataatcggcagcggaggaaccggcagccgagggtccgctccgggaacgagcct
cgttccgcgcccgccatggagccggatggtcgcggggcctgggcccatagtcgcgccgcg
ctcgaccgcctggagaagctgctacgctgctcacgttgcgctaacattctgagagagcct
gtgtgcttaggaggatgtgagcacatcttctgtagtaattgtgtaagtgactgcattgga
actggatgtccagtgtgttacaccccagcctggatacaagacgtgaagataaatagacaa
ctggacagcatgattcaactttgtagtaaacttcgaaatttgctacatgacaataagctc
tcagatttgaaagaagatgaccctaggagaagtttgtttaatgatgcagaaaacaagaag
aattcaattaaaatgtggtttagccctcgaagtaagaaagtcagatatgttgtgagtaaa
gtttcagtgcaaacccagcctgcaataaaaaaagatgcaaatgctcagcaagactcctat
gaatttgtttccacaagtcctcctgcagatgtttctgagagggctaaaaaggcttctgca
agatccagaaaaaagcaaaaaaagaaaactttagctgaaatcaaccaaaagtggaattta
gaggcagaaaaagaagatggtgaatttgactccaaagaggaatcaaagcaaaagctggta
tctttctgtagccaaccatctattatctccagtcctcagataaatggtgaaatagactta
ctagcaagtggctccttgacagaatctgaatgttttggaagtttaactgaagtctcttta
ccattggctgagcaaatagagtctccggacactaagagcaggaatgaagtagtgactcct
gagaaggtctgcaaaaattatcttgcatctaagaaatctttgccattagaaaataatgga
aaacatgaccatcacaatagactttccagtcccatttctaagagatgtagaaccagcatt
ctgagcaccagtggagattttgttaagcaaacgatgccctcagaaaatacaccattgcct
tcatgcaaacgtaaagttggtggcacatcagggaggaaaaacagtaacttgtcagatgaa
ttcagtagtctttctccgggtacaccaccttctacattaaatagttcaagttacagacga
gtgatgtccagcccctcagcagtgaagctgttgcccaatatggctgtgaaaagaaatcat
agaggagagactttgctccacattgcttctattaagggtgacataccttctattgaatac
cttttacaaaatggaagtgatccaaatgttaaagaccatgctggatggacaccattgcat
gaagcttgcagtcatgggcacctgaaggtagtggaattattgctccagcataaggcattg
gtaaacaccactgggtatcaaaatgactcaccacttcacgatgcagccaagaatgggcac
atggatatagtcaagctgttactttcctatggagcctccagaaatgctgttaacatattt
ggtctgcggcctgtggattgtacagacgatgaaaatatgaaatcactattgctgctacca
gagaaaaatgaatcgtccacaactagccattgcttggtaatgaacactgggcagcgtagg
gatggacctcttgtacttataggcagtgggctctcttcagaacaacagaaaatgctcagt
gagcttgcagcaattcttaaggctaaaaaatgtactgagtttgacagtacagtaactcat
gttgttgttcctggtgatgcagttcaaagtactttgaagtgtatgcttggaattctcaat
ggatgctggattctaaaatttgaatgggtaaaagcatgtctacgaagaaaagtatgtgaa
caggaagaaaagtatgaaattcctgaaggtccacacagaagcaggctcaacagagaacag
ctgttgccaaagctatttgatggatgctacttctatttggggggatccttcaaacaccat
ccaaaggacaaccttattaagctcgtcactgcaggtgggggccagatcctcagtagaaag
cccaagccagacagtgacgtgactcagaccatcaatacagtcgcataccatgcaagaccc
gattctgatcagcgcttctgcacgcagtatataatctatgaggatttgtctaattatcac
ccagagagggttcggcagggcaaagtctggaaggctccttcaagctggtttatagactgt
gtgatgtcctttgagttgcttcctcttgacagctga
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