Rhinopithecus roxellana (golden snub-nosed monkey): 104669753
Help
Entry
104669753 CDS
T03989
Symbol
SETX
Name
(RefSeq) probable helicase senataxin isoform X1
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
104669753 (SETX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104669753 (SETX)
Enzymes [BR:
rro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104669753 (SETX)
5.6.2.5 RNA 5'-3' helicase
104669753 (SETX)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104669753 (SETX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_19
AAA_30
UvrD-helicase
AAA_22
ResIII
Helicase_RecD
nSTAND3
AAA_16
UvrD_C_2
Motif
Other DBs
NCBI-GeneID:
104669753
NCBI-ProteinID:
XP_010371134
LinkDB
All DBs
Position
16:13868418..13962030
Genome browser
AA seq
2707 aa
AA seq
DB search
MSTCCWCTPGGGSTIDFLKRYASNTPSSEFQTANEDLCYCLECVAEYHKARDELPFLHEV
LWELETLRLINHFEKSMKAEIGDDDELYIVDNNGEMPLFDITGQDFENKLRVPLLEILKY
PYLLLHERVNELCVEALCRMEQANCSFQVFDKHPGIYLFLVHPNDMVRRWAILTARNLGK
VDRDDYYDLQEVLICLFKVIELGLLESPDIYTSSVLEKGKLILLPSHMYDTTNYKSYWLG
ICMLLTILEEQAMDSLLLGSDKQNDFMQSILHTMERQSDDDSVDPFWPALHCFMVILDRL
GSKVWGQLIDPIEAFQTIINNASYNREIQHIRNSSVRTKLEPESYLDDMVTCSQIVYNYN
PEKTKKDSGWRTAICPDYCPNMYEEMETLASVLQSDIGQDMRVHNSTFLWFIPFVQSLMD
LKDLGVAYIVEVVHHLYSEVKDVLNQTDAMCDKVTEFFLLILVSVIELHRNKKCLHLLWV
SSQQWVEAVVKCAKLPTTAFTRSSEKSSGNCSKGTAMISSLSLHSMPSNSVQLACVQLIR
SLLKEGYQLGQQSLCKRFWDKLNLFLRGNLSLGWQLTSQETHELQTCLKQIIRNIKFKAP
PCNTFVDLTSTCKTSPASYNREESEQIGKKSRKDMHYLEASSPTFSKEPMKAQDSVLIKA
DNTIEGDNDEQNYIKDVKLEDQLSAGSCFKRNSENMFTERAEDEIKISTRKQKSVKENSS
YTPEDCTSRNGPERGCDRGIIVSTRLLTDSSTDALEKVSTSNEDFSLKDDALAKTSKRKT
KVQKDEICAKLSHVIKKQHRKSTLVNNTINLDENLTVSNIGSFYSRKDTGVQKGDGFIHN
LSLDPSGVLDYNKNGEQKSQNNLLPEEKQLKNEELDIFYSHENNCEIQEFHADDKDSIPF
TEMANTSEKKSSSFKDLMTVPESRDEAMSNSTNVIYSNLTREQAPGISPKSDTLTDSQID
RDLHKLSLLAQASVITFPSDSPQNSSQLQRKGKEDKRCFTANQNNGDASRGQVIIISDSD
DDDDDERILSLEKLTRQDKRCLEKERPEQHVSTVTEEKNPVKEEKTKSLFQFEESDSQCF
EFESASEVFSVWQDHLDNNNSVQDGEKKCLTPITNTTNGQDCTDYVSEVVKKGAEGIEEH
TRPQSSSISVEEFCEIEVKKPKRKRSEKPIPEDPVRPSSSVRNEGQSDTNKRNLVGNDFK
SIGRRTTTSNSSIQRATTVSQKKSSKLCTYIEPIRKVPVSKTPKKTHSDAKKGQNRSSNY
LSCRTTPAIVPPKKFRQCPEPTSTVEKLGLKKGPRKAFELSQRSLDYVAQLRDHGKTVGV
VDTRKKTKLISPQNLSVRNNKKLLTSQELQMQRQIRPKSQKNRQRLSDCESTDATRAGPH
TAQNSDTFVPESDRSDYDCSAGTEVLANSNGKQLIKCVPSEPETIKAKHGSLATDGACPL
NQCDSIVLNGTVPTSEVIVSISEDPLGGGDPTAHHTEMATLNEGEPDSSSDTEEDNLFLT
QNDPEDMDLCSQMENDNYKFIELIHGKDTVQVEEDSVSHPQLESLSGTKCKYKDCLETTK
NQGEYCPQHSEVKATDEDVFRKPGLPPSASKPLRPTTKIFSSKSTSRIAGLSKSLETSSA
LSPSLKNKAKGIQSILKVPQPAPLVAQKPVGEMKNSSNVLHPQSPNNSNRQGCKVPFGES
KYFPSSSPVNILLSSQSVSDTFIKEVLKWKYEMFLNFDQCGPPASLCQSISRPVPIRFHT
YGDYFNVFFPLVVLNTFETVVQEWLNSPNRENFYQLQVRKFPADYIKYWEFAVYLEECEL
AKQLYPKENDLVFLVPERINEEKKDAERNDIQDLHEYHSGYVHKFRRTSVMRNGKAECYL
SIQTQENFPANLNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDL
LTTTSERIIAYLRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYC
LLTENQRKGRSDENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCG
DINLVRLGPEKSINNEVLKFSLDSQVNHRMKKDLPSHVQAMHKRKEFLDYQLDELSRQRA
LCRGGREIQRQELDEKISKVSKERQELASKIKEVQGRPQKTQSIIILESHVICCTLSTSG
GLLLESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHRCNKLILVGDPKQLPPTVISMK
AQEYGYDQSMMARFCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYIYNRNLKT
NRQTETIRCSSDWPFQPYLVFDVGDGSERRDNDSYINVQEIKLVMEIIKLIKDKRKDVSF
RNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTVDAFQGRQKDCVIVTCVRANSVQGSI
GFLASLQRLNVTITRAKYSLFILGHLRTLMQLLPRSFCVHVNHSPFFSPEPKYLHWALKE
NQHWNQLIQDAQKRGAIIKTCDKNYRHDAMKILKLKPVLQRSLTHPPTIAPEVSRPQGGL
PSSKLDSGFAKTSFAASLYHTPSDSKETTLTVTSKDPERPVHDQLRDPRLLKRMGIEVKG
GIFLWDPQPLSPQHPGATPPAGEPSFPVVHQDLGHVQQPAAVVAALSSHKPPVQGEPPAA
SPEASTCQSKCDDPEEELCHRREARAFSEGEQEKCGSETPHTRRNSRWDKRGLEQEDSSS
SKKRKLL
NT seq
8124 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatgttgttggtgtactccaggtggtggttccaccattgacttcctaaagcgc
tatgcttccaacactccatccagtgaatttcaaacagccaacgaagacctctgctactgc
ttagagtgtgtggcggaataccacaaagcaagagatgaattgccattcttgcatgaggtt
ttatgggaattggaaaccttacgtctgataaatcactttgaaaaatccatgaaggcagaa
attggagatgatgatgagttatatatagtagacaacaatggagagatgccactgtttgac
atcactggacaagactttgaaaataagcttcgagttcctcttcttgaaatactgaaatat
ccttatttgcttctacatgaacgtgttaatgagttatgtgttgaagcactttgtcggatg
gaacaagccaattgctcctttcaggtgtttgacaaacatccagggatctatttgtttttg
gtccatcccaatgatatggttcggcgttgggctatcttgactgcaagaaacttggggaaa
gtggacagagatgattattatgacttacaagaagttttaatttgcctctttaaagtcatt
gagttgggacttctagagagtccagacatttatacttcttctgtcctagagaagggtaaa
ctaattcttctgccctcacacatgtatgatactaccaactacaaaagctattggttaggt
atttgcatgttgctgaccattcttgaggaacaagccatggattccctattgttgggctca
gacaaacaaaatgattttatgcaatcgatacttcacactatggagaggcaatcagacgat
gatagtgtggatcctttctggccagcattacactgttttatggtgattctggaccgcctt
ggatctaaggtctggggtcagcttattgatcctatcgaggcatttcaaaccattatcaac
aatgcaagctacaatagagagattcaacatatacggaacagctctgtaaggaccaagtta
gaaccggagtcatatttggatgatatggtgacttgcagccagatcgtatacaattataat
cctgaaaagaccaaaaaggattctggatggagaacagccatttgcccagattattgtcct
aacatgtatgaagaaatggaaacattagccagtgtgcttcagtcagatattggtcaagac
atgcgtgttcataacagcacatttctgtggttcatcccttttgtccagtccctcatggat
cttaaggatttgggtgtggcttacatagtagaggttgttcatcatctgtactctgaagtc
aaagatgtcctcaaccaaacagatgccatgtgtgacaaagtcactgaattttttcttcta
attttggtatcagtgattgaactgcatagaaataaaaaatgtttgcatttgctgtgggta
agttcccagcaatgggtagaagctgtcgtcaaatgtgccaagcttcctactactgcattt
acacggagttctgagaaatcatctggaaattgctccaaaggaacagcaatgatatcatca
ctgtcgttgcattccatgccatctaactctgtacaacttgcttgtgtgcagctgattaga
agtctccttaaagaaggttatcagcttgggcagcaatctctttgcaagcgattctgggat
aagctcaacttattccttagaggaaatttatctctaggttggcagttgactagtcaggaa
acccacgagctacaaacttgtttaaagcaaattattagaaacataaaattcaaagcacct
ccatgtaacacttttgtggatctgacttctacatgtaaaacctctccggcatcttataat
agagaagaaagtgaacaaatagggaagaagtctagaaaagatatgcattatttggaagct
tccagcccaacattttctaaagaaccaatgaaagcgcaagacagtgtattgatcaaagca
gataacactatagaaggtgacaatgatgagcaaaattatataaaggatgtgaaactagaa
gaccagctctcagctgggtcatgcttcaagcggaatagtgaaaacatgtttactgaaaga
gctgaagatgaaattaaaataagtacaaggaagcagaagtctgtaaaagagaactcctca
tatacaccagaggattgtacttcaagaaatggtccagaaaggggatgtgacagaggaata
atagtatcaacacgtttgttgactgattctagcactgatgctttggaaaaagtgtccaca
tcaaatgaagatttctctttaaaggatgatgctcttgctaaaacctcaaaacgaaaaact
aaggtacagaaagatgaaatctgtgcaaagttatcacatgtaataaagaaacaacacagg
aagagtactttggtcaataatactatcaatttagacgaaaatttgactgtatctaacatt
gggagtttctattcaaggaaagatacaggagttcagaaaggagatggtttcatacacaat
ctttctttagaccctagtggtgtactggattataataagaatggagaacaaaaatctcaa
aacaatttattgccagaagagaagcagttaaagaatgaagagttagatattttctattcc
catgaaaacaattgtgaaatacaggaatttcatgctgatgataaagattcgatccccttt
acagaaatggccaatacttcagagaagaaatcatcttcctttaaagatcttatgactgta
cctgaatcaagagatgaggcgatgagtaatagtaccaatgtgatttattctaacttgaca
agagaacaggcccctggcatcagtcctaaatctgacaccttaacagattctcagatagac
agagaccttcacaaattatctttactagctcaagccagtgttattacgtttccatctgat
tcccctcagaactcatcccagctacaaaggaaaggaaaagaagataaaagatgtttcaca
gctaaccaaaataatggagatgcctcccgtggacaggtgattattatttcagattctgac
gatgatgatgatgatgaaagaatcctgagtcttgagaaactcactagacaggacaaaaga
tgccttgagaaggaacgtccagagcagcacgtttcaacagttacggaggaaaagaatcca
gtaaaggaagaaaagacgaagtctctttttcagtttgaggaatctgattctcagtgtttt
gagtttgaaagtgcatctgaagtgttttccgtttggcaggatcatctagacaataataat
tcagttcaagatggtgagaaaaaatgtttgactcctataaccaataccacaaatggtcag
gattgtacagattatgtatctgaagttgttaaaaaaggggcagagggcattgaagaacac
actagaccacagagcagtagtatttctgttgaggaattttgtgaaattgaagtaaaaaag
cctaagagaaaacgatctgaaaaaccaattcctgaagatcctgtgaggccttcatcttct
gtcagaaatgagggccagtctgatactaataagagaaatcttgttggaaatgattttaag
agtataggtagaaggactacaacttccaattcaagtattcagagagccactacggtttca
caaaagaaatcttcaaagctttgtacttatatagaacccatcaggaaagttccagtttct
aagacccctaagaaaactcattcagatgccaaaaaaggacagaatagaagttcaaattac
ctcagttgtaggacaactcctgctatagtgccaccaaagaaatttcgtcagtgtcctgaa
ccaacttcaacagttgagaaacttggcctgaaaaagggtcctcgtaaggcatttgagttg
tcccagcgatctttggattatgtagctcagttacgtgatcatggcaaaactgttggagta
gttgatactcgaaaaaagactaaattaatttctcctcagaacctgtctgtcagaaataat
aagaaactgctgactagtcaagaacttcagatgcaaaggcaaatcagacccaaatcacaa
aaaaatagacaaagactttctgattgtgaaagtacagatgctacaagagcagggcctcat
acagcacagaattctgacacatttgtaccggaatctgataggtcagattatgattgttca
gcaggaactgaggtacttgccaacagtaatggaaaacagttaataaaatgcgtgccttct
gaaccagaaaccataaaagcaaaacatgggtctctagcgactgatggtgcttgccctttg
aaccaatgtgattcaatagtgttaaatggaacagtaccaacgagtgaagtaattgtctct
atttcagaagaccctctggggggaggtgatccgacagcacatcatacagagatggcaact
ttgaacgagggagagcctgactccagcagtgatacagaggaagataacttatttttaaca
caaaatgatcctgaagatatggatttatgttcacaaatggagaatgacaattataagttc
attgaactaattcatggaaaagatacagttcaggttgaagaagattctgtaagtcatcct
cagttggaatctttgagtggcacaaagtgtaagtacaaagattgtcttgaaaccacaaaa
aaccagggtgaatactgcccacaacactctgaagtgaaagcaacagatgaagatgtattt
cgtaaacctggtttgcctccttctgcatctaaacctttgagacctaccactaagattttt
agctcaaagagtacttcacgaattgctggtctttctaaatctttggaaacttcttcagca
ctttcaccatctctaaaaaataaggcaaaggggattcagtcgattttgaaagtaccacag
ccagctcccctcgtagctcagaagccagtgggtgaaatgaaaaattcgagcaatgttctt
catcctcagtctccaaataattccaacaggcaaggttgcaaagttccatttggtgaaagc
aaatattttccatcttcctctccagtaaacattctcttgtcatcacagtctgtctctgac
accttcattaaagaggtcttaaaatggaaatatgaaatgtttttgaactttgatcagtgt
gggccccctgcaagtctttgtcagtccatctcaagacctgtgcctatcagatttcacact
tatggagattattttaatgtttttttccctttggtggtattgaatacttttgaaacagtg
gtgcaggaatggctcaactctccaaatagagagaatttctatcagttgcaagtacgaaaa
tttcctgctgattatataaaatactgggagtttgcggtttatctggaagaatgtgaattg
gctaaacagctttatccaaaggaaaatgatttggtgtttttagttcctgagagaataaat
gaagagaagaaagatgcagagagaaatgacatacaagatctccacgaatatcattctggt
tatgttcataaatttcgccgcacttcagtcatgcgtaatgggaaagctgagtgttacctt
tccatccagactcaagagaattttccggccaatttaaatgaacttgtgaattgtattgta
atcagttctctggtaacaacacaaaggaagttgaaagccatgtctcttttgggtagtcgg
aaccaactggctagagctgttctgaatccaaaccctatggacttctgtacaaaagattta
ctaactacaacatctgagagaattattgcttacttaagagatttcaatgaagaccaaaag
aaagcaatagaaactgcatatgctatggtgaaacactcaccatcagttgccaaaatctgc
ttgattcatggaccacctggaacaggaaaatcaaaaactattgttggcctcctctattgt
ctactgacagagaaccagaggaaggggcgttcagacgaaaactccaatgccaaaatcaaa
caaaaccgtgtcctcgtgtgtgcaccttccaatgcagctgttgatgaacttatgaaaaaa
attatccttgaattcaaagaaaaatgtaaagacaagaagaatcctttaggaaactgtgga
gatataaatttagtacgactgggtccagaaaagtctatcaataatgaggttctaaagttc
agtttggacagccaagtaaaccacagaatgaaaaaagatttaccttctcatgttcaggcg
atgcataaaagaaaggaatttctagattatcagttggatgagctttcccggcagcgagct
ctatgccgaggtggacgggaaatacagaggcaagaattagatgaaaaaatttccaaagtt
tctaaggaaaggcaggaacttgcttctaaaattaaagaggttcaaggacgcccacagaaa
acacagagtatcatcatcttagagtcccatgtcatctgctgcacattgagcacaagtggt
ggcttactacttgaatctgctttccgggggcaagggggtgtccccttcagctgtgtcatt
gttgatgaggctggacagtcttgtgaaattgagactcttaccccactcatccatcgttgc
aataagctcatcctagtaggagatcccaagcagctccctcccacagtcatctctatgaaa
gcacaggagtatggctacgaccagtcaatgatggctcgcttctgcagactgctggaagag
aatgtagaacacaacatgatcagcaggctgcctattctgcagctcactgtgcagtacagg
atgcatccagacatatgcctcttcccttctaattatatttacaacagaaacttaaaaaca
aatagacagacagaaaccattcgatgttcatcggactggccatttcaaccataccttgtg
tttgatgtcggagatggttcagaaagacgggataatgactcatacataaatgttcaagaa
ataaaactggtgatggaaataattaagcttattaaagacaaaagaaaggatgttagtttt
cgaaacattggcataataactcattacaaggcccagaagacgatgattcagaaggatttg
gacaaagagttcgatagaaaaggaccagcagaagtagatactgtggatgcgttccagggt
cggcagaaggattgtgtcattgttacatgtgtcagagcaaatagcgtgcaaggttcaatt
ggattcctggcaagtttgcagagattgaatgtcaccatcacacgagccaagtacagcctc
ttcatcctcggacatttgaggaccctgatgcaacttcttcctaggagcttttgtgtacac
gtgaaccattcgccttttttcagcccagaacccaagtatctacactgggctctcaaggaa
aaccagcattggaatcagctgattcaggatgctcagaagcgtggtgccattattaagacc
tgtgacaaaaactacagacatgatgcaatgaagattctgaaactcaagcctgtgctacag
agaagtctcactcaccctcctaccatagccccagaggtatccagaccccagggtggcttg
cccagcagcaagctagacagtggatttgccaagacatcttttgctgcatctctgtaccac
acaccctctgactccaaggaaactactcttactgttacttcaaaggaccctgaaagacct
gttcatgaccaacttcgggacccacgactgctgaagaggatgggcattgaggtcaaagga
ggaatattcctatgggatccacaacccttgagcccccagcatcctggagcaacacctcct
gcaggagagccgagcttccctgtcgttcaccaggacctgggccatgtacagcagcctgct
gctgtggtggctgctctgagcagccacaaacctcccgtgcagggcgaacctccagctgcc
agtcctgaggcttccacgtgtcagagcaaatgtgatgacccagaagaggagctctgtcac
aggagagaggccagggctttcagtgaaggcgagcaggagaagtgtggttccgagacccct
cacaccaggaggaactctaggtgggacaagaggggactggagcaggaggacagcagcagt
tccaagaaaagaaagcttttatag
DBGET
integrated database retrieval system
