Rhinopithecus roxellana (golden snub-nosed monkey): 104670456
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Entry
104670456 CDS
T03989
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03082
ATP-dependent chromatin remodeling
rro04714
Thermogenesis
rro05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104670456 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
104670456 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
104670456 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104670456 (SMARCA4)
03036 Chromosome and associated proteins [BR:
rro03036
]
104670456 (SMARCA4)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104670456 (SMARCA4)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
104670456 (SMARCA4)
Chromatin remodeling factors
BAF complex
104670456 (SMARCA4)
PBAF complex
104670456 (SMARCA4)
GBAF(ncBAF) complex
104670456 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
104670456
NCBI-ProteinID:
XP_030791199
LinkDB
All DBs
Position
8:15965850..16067742
Genome browser
AA seq
1682 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESMHEKGMSDDPRYNQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEEEEEEEEQPQAAQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKKITGKDIHDTASSVARGLQFQRGLQFCTRASKTLKAIEEGTLEEIEEEVR
QKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKI
VDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDL
EKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEG
SESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSDEEQEEDRSGSGSE
ED
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccctgggtggaactcctcggccgggtccttccccgggccct
ggcccttcccctggagccatgctgggccctagcccgggtccctcgccgggctccgcccac
agcatgatggggcccagcccagggccaccctcagcaggacaccccatccccacccaggga
cctggagggtaccctcaggacaacatgcaccagatgcacaagcccatggagtccatgcac
gagaagggcatgtcggacgacccgcgctacaaccagatgaaaggaatggggatgcggtca
gggggccacactgggatggggcccccgcccagccccatggaccagcactcccaaggttac
ccctcgcccctgggtggctctgagcatgcctctagtccagttccagccagtggcccatct
tcaggcccccagatgtcttccggaccaggaggggcaccgctggatggtgctgacccccag
gccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcatcagctc
agagctcagatcatggcctacaagatgctggccagggggcagcccctccccgatcacctg
cagatggcggtgcagggcaagcggccaatgcctgggatgcagcagcagatgccaacgcta
cctccaccctcggtgtccgcaacaggacctggccctggccctggccccggccctggcccc
ggtcccggcccggcacctccaaattatagcaggcctcatggtatgggagggcccaacatg
ccccccccaggaccctcaggcgtgccccctgggatgccgggccagcctcctggagggcct
cccaagccctggcctgaaggacccatggcgaatgctgctgcccccacgagcacccctcag
aaactgatccccccgcagccaacgggtcgcccttcccctgcgccccctgccgtcccaccc
gctgcctcgcctgtgatgccaccccagacccagtcccccgggcagccggcccagcccgcg
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagccgcggggc
ctcgaccctgtggagatcctgcaggagcgcgagtacaggctgcaggctcgcattgcacac
cgaattcaggaacttgaaaaccttcccgggtccctggccggggatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaactttcagaggcagctgcgccaggaggtg
gtggtgtgcatgcggagggacacagcgctggagacggccctcaatgctaaggcctacaag
cgcagcaagcgccagtccctgcgcgaggcccgcatcaccgagaagctagagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaatagcattctc
cagcatgccaaggatttcaaggaatatcacagatcagtcacaggcaaaatccagaagcta
accaaggcagtggccacgtaccatgccaacacggagcgggagcagaaaaaagagaatgag
cggatcgagaaggagcgcatgcggaggctcatggctgaagatgaggaggggtaccgcaag
ctcatcgaccagaagaaggacaagcgtctggcctacctcttgcaacagacagatgagtac
gtggctaacctcacagagctggtgcggcagcacaaggccgcccaggtcgccaaggagaaa
aagaagaaaaagaaaaagaagaaggcagaaaatgcagaaggacagacgcctgccatcggg
ccggatggtgagcctctggacgagaccagccagatgagcgacctaccggtgaaggtgatc
catgtggagagcgggaagatcctcacgggcacagatgcccccaaagccggacagctggag
gcctggctcgagatgaacccggggtatgaagtagctccgaggtctgatagtgaagaaagt
ggctcagaagaagaggaagaggaggaggaggaagagcagccgcaggcagcacagcctccc
accctgcctgtggaggagaaaaagaagattccagatccagacagcgacgacgtctctgag
gtggacgcacggcacatcattgagaacgccaagcaagatgtcgatgatgagtatggtgtg
tcccaggcccttgcacgtggcctgcagtcctactatgccgtggcccacgctgtcaccgag
agagtggacaagcagtcagcgcttatggtcaatggtgtcctcaaacagtaccagatcaaa
ggcttggagtggctggtgtccctgtacaacaacaacctgaacggcatcctggctgacgag
atgggcctggggaagaccatccagaccatcgcgctcatcacgtacctcatggagcacaaa
cgcatcaacgggcccttcctcatcattgtgcctctctcaacgctgtccaactgggcgtac
gagtttgacaagtgggccccctccgtggtgaaggtgtcctacaagggatccccagcagca
agacgggcctttgtcccccagctccggagtgggaagttcaacgtcttgctgacgacatac
gagtacatcatcaaagacaagcacatcctcgccaagatccgttggaagtacatgattgtg
gacgaaggtcaccgcatgaagaaccaccactgcaagctgacgcaggtgctcaacacacac
tacgtggcgccccgccgcttgctgctgacaggcacaccactgcagaacaagcttcccgag
ctctgggcgctgctcaacttcctgctgcccaccatctttaagagctgcagcaccttcgag
cagtggttcaacgcacccttcgccatgactggggaaaaggtggacctgaatgaggaggaa
accattctcatcatccggcgtctccacaaagtgctgcggcccttcttgctccgacgactc
aagaaggaagtcgaggcccagttgcccgaaaaggtggagtatgtcatcaagtgcgacatg
tctgcactgcagcgagtgctctaccgccacatgcaggccaagggcgtgctgctgactgac
ggctccgagaaggacaagaagggcaaaggcggcaccaagaccctgatgaacaccatcatg
cagctgcggaagatctgcaaccacccctacatgttccagcacatcgaggagtccttttcc
gagcacttggggttcaccggcggcattgtccaagggctggacctgtaccgagcctcgggt
aaattcgagcttcttgatagaattcttcccaaactccgagcaaccaaccacaaagtgctg
ctgttctgccaaatgacctccctcatgaccatcatggaagattactttgcatatcgtggc
tttaaatacctcaggcttgatggaaccacgaaggcagaggaccggggcatgctgctgaaa
actttcaacgagcccggctccgagtacttcatcttcctgcttagcacccgggccggggga
ctcggcctgaacctccagtcggcggacactgtgatcattttcgacagcgactggaatcct
caccaggacctgcaggcgcaggaccgagcccaccgcattgggcagcagaacgaggtgcgc
gtgctccgcctctgcacagtcaacagcgtggaggagaagatcctagccgcggccaagtac
aagctcaacgtggaccagaaggtgatacaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgtgccttcttgcaggccatcctggagcatgaggagcaggatgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaggaagacgaggtgcccgacgacgag
accgtcaaccagatgatcgcccggcacgaggaggagtttgatctgtttatgcgcatggac
ctggaccgcaggcgcgaggaggcccgcaaccccaagcggaagccgcgcctcatggaggag
gacgagctcccttcgtggatcatcaaggatgatgcggaggtggagcgcctgacctgtgag
gaggaggaggagaagatgtttggtcgcggctcccgccaccgcaaggaggtggactacagc
gactcactgacggagaagcagtggctcaagaaaattacaggaaaagatatccatgacaca
gccagcagtgtggcacgtgggctacaattccagcgtggccttcagttctgcacacgtgcg
tcaaagaccctgaaggccatcgaggagggtacgctggaggagatcgaagaggaggtccgg
cagaagaaatcgtcacggaagcgcaagcgagacagtgatgccggctcctccaccccgacc
accagcacccgcagccgcgacaaggacgacgagagcaagaagcagaagaagcgcgggcgg
ccgcctgccgagaagctctccccgaacccacccaacctcaccaagaagatgaagaagatt
gtggacgccgtgatcaagtacaaggacagcagcagtggacgtcagctcagcgaggtcttc
atccagctgccctcgcgaaaggagctgccggagtactacgagctcatccgcaagcccgtg
gacttcaagaagataaaggagcgcatccgcaaccacaagtaccgcagcctcaacgaccta
gagaaggacgtcatgctgctgtgccagaacgctcagaccttcaacctggagggctccctg
atctatgaagactccatcgtcttgcagtcggtcttcaccagcgtgcggcagaaaatcgag
aaggaggatgacagtgaaggcgaggagagtgaggaggaggaagagggcgaggaggaaggc
tctgaatctgaatctcggtctgtcaaagtgaagatcaagcttggccggaaggagaaagca
caggaccggctgaagggcggccggcggcgaccaagccgagggtcccgagccaaaccggtc
gtgagtgacgacgacagtgatgaggaacaagaggaggaccgctcaggaagtggcagcgaa
gaagactga
DBGET
integrated database retrieval system
