Rhinopithecus roxellana (golden snub-nosed monkey): 104671966
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Entry
104671966 CDS
T03989
Symbol
COL4A4
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
rro04926
Relaxin signaling pathway
rro04933
AGE-RAGE signaling pathway in diabetic complications
rro04974
Protein digestion and absorption
rro05146
Amoebiasis
rro05165
Human papillomavirus infection
rro05200
Pathways in cancer
rro05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104671966 (COL4A4)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104671966 (COL4A4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104671966 (COL4A4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104671966 (COL4A4)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
104671966 (COL4A4)
09154 Digestive system
04974 Protein digestion and absorption
104671966 (COL4A4)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
104671966 (COL4A4)
09162 Cancer: specific types
05222 Small cell lung cancer
104671966 (COL4A4)
09172 Infectious disease: viral
05165 Human papillomavirus infection
104671966 (COL4A4)
09174 Infectious disease: parasitic
05146 Amoebiasis
104671966 (COL4A4)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
104671966 (COL4A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rro04147
]
104671966 (COL4A4)
00536 Glycosaminoglycan binding proteins [BR:
rro00536
]
104671966 (COL4A4)
Exosome [BR:
rro04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104671966 (COL4A4)
Glycosaminoglycan binding proteins [BR:
rro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104671966 (COL4A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104671966
NCBI-ProteinID:
XP_010373928
UniProt:
A0A2K6PCA1
LinkDB
All DBs
Position
14:22260493..22394253
Genome browser
AA seq
1690 aa
AA seq
DB search
MSSLHVVLMRCSFRLTKSLATGPWSLILILFSVQYVYGSGKKYVGPCGGRDCSVCHCVPE
KGSRGPPGPPGPQGPIGPLGAPGPTGLSGEKGMRGDRGPPGTAGDKGDKGPTGVPGFPGL
DGIPGHPGPPGPRGKPGKCGYNGSRGDPGFPGGRGALGPGGPPGHPGEKGEKGNSVFILG
AIKGIQGDRGDPGLPGLPGSWGAGGPAGPTGYPGEPGLVGPPGQPGLPGLKGNPGVGVKG
QMGDPGEVGQQGSPGPTLLVEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGESGIGAKGE
KGIPGFPGPWGDPGSYGSPGFPGLKGEVGLVGDPGLFGFLGPKGDPGDRGHPGPPGVLVT
PPLPLKGPPGDPGFPGRYGETGDVGPPGPPGLLGRPGEACAGMIGPPGPQGFPGLPGLPG
EAGIPGRPDSAPGKPGKPGSPGLPGAPGLQGLPGSSATYCSVGNPGPQGIKGKVGPPGGR
GSKGEKGNEGLCACEPGPMGPPGPPGLPGRQGSKGDLGLPGWLGTKGDPGPPGAEGPPGL
PGKPGASGPPGNKGAKGDVVISRVKGHKGERGPDGPPGFPGQPGSHGLDGHAGEKGDPGL
PGDHEDAIPGDKGFPGPLGPPGKAGPVGPPGLGFPGPPGERGHPGVPGCPGVRGPGGLKG
QKGDTISCNVTYPGRQGPPGFDGPPGPKGFPGPQGAPGLSGSDGHKGRPGTPGTSEIPGP
PGFRGDIGDPGFGGEKGSSPVGPPGPPGSPGVNGQKGIPGDPAFGHLGPPGRRGLSGVPG
IKGPRGDPGYPGAEGPAGIPGFPGLKGPKGREGHAGFPGVPGPPGHSCERGAPGIPGQPG
LPGDPGSPGAPGGKGQPGDVGPPGPAGMKGLPGLPGRPGAHGPPGLPGIPGPFGDDGLPG
PPGPKGPRGLPGFPGFPGERGKPGAEGCPGTKGEPGEKGTSGFPGDQGVRGAKGAIGPPG
DEGEMAIISKKGKPGEPGPPGDDGFPGERGDKGTPGMQGRRGEPGRYGPPGFHRGEPGEK
GQPGPPGHPGPPGSTGLRGFIGFPGLPGDQGEPGSPGPPGFSGIDGATGPKGNKGDPASH
FGPPGPKGEPGSSGCPGHFGASGDRGLPGVQGPRGSPGRPGPPGSSGPPGCPGDQGMPGL
RGQPGEMGDPGPRGLQGDPGIPGPPGIKGPSGSPGLNGLHGLKGQKGTKGASGLHDVGPP
GPVGMPGLKGERGDPGSPGISPPGPCGEKGLPGPPGRSGPPGPAGATGRAPKDIPDPGPS
GDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPPGLPGPPGPPGYKGFPGCDGK
DGQKGPMGFPGPQGPHGFPGPPGEKGLPGPPGRKGPTGLPGPRGEPGPLADANDCPRIPG
LPGVPGLRGPEGAMGLPGMRGPPGPGCKGEPGLDGRRGMDGIPGSPGPPGRKGDTGEDGY
PGGPGPPGPTGDPGPKGFGAGYLSGFLLVLHSQTDQEPTCPLGMPRLWTGYSLLYLEGQE
KAHNQDLGLAGSCLPVFSTLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMMPLSEEAIR
PYVSRCAVCEAPAQAVAVHSQDQSIPPCPQTWRSLWIGYSFLMHTGAGDQGGGQALMSPG
SCLEDFRAAPFLECQGRQGTCHFFANEYSFWLTTVKADLQFSPAPAPDTLKESQAQRQKI
SRCQVCVKYS
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtctctgcatgtagtactaatgaggtgctccttcagattgaccaagtcattggcc
acaggtccatggtcacttatactcattctcttttctgtacaatatgtatatgggagtgga
aagaaatacgttggtccttgtggaggaagagattgctctgtttgccactgcgttcctgaa
aaggggtctcggggtccaccaggaccaccagggccacagggtccaattgggcccctggga
gccccaggacccactgggctttcaggagagaaaggaatgagaggggaccgcggccctcct
ggaacagcaggggacaaaggagataagggtccaactggtgttcctggatttccaggttta
gatggcatacctgggcacccagggcctcctggacccagaggcaaacctggtaagtgtggc
tacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcttggtccagga
ggccccccaggccatcctggggaaaagggagaaaaaggaaattcagtgttcattttaggt
gccattaaaggtattcagggagacagaggcgacccaggactgcctggcttaccaggatct
tggggtgcaggaggaccggcaggccccacaggatatcctggagagccagggttagtggga
cctccgggccaaccagggcttccaggtttgaagggaaatcccggtgtgggagtaaagggg
caaatgggagacccgggtgaggttggtcagcaaggttctcctggacccaccctgttggta
gagccacctgacttttgtctctataaaggagaaaagggcataaaaggaattcctggaatg
attggactgccaggaccaccaggacgcaagggagaatctggtatcggggcaaaaggagaa
aaaggcatccctggatttccagggccttggggggatcctggttcctatggatctccaggt
ttcccaggattaaagggagaagtaggactggttggagatcctggtctatttggatttctt
ggcccaaagggggatcctggagaccgagggcacccaggaccaccaggtgttttggtgact
ccacctcttccactcaaaggcccaccaggggacccaggattccctggccgctatggagaa
acaggggatgttggaccacctggtcccccaggtctcttgggcagaccaggggaagcctgt
gcaggcatgataggtccccctgggccacaaggatttcctggtcttcctgggcttccagga
gaagctggtattcctgggagacctgattctgctccaggaaaaccagggaagccaggatca
cctggcttgcctggagcaccaggcctgcagggcctcccaggatcaagtgcgacatactgt
agtgttgggaaccctggaccacaaggaataaaaggcaaagtgggtcccccaggaggaaga
ggctcaaaaggagaaaaaggaaatgaaggactctgtgcctgtgagcctggtcccatgggc
ccccctggacctccaggacttcccgggaggcaggggagtaagggagacttggggctccct
ggctggcttggaacaaaaggtgacccaggacctcctggtgctgaaggacctccagggcta
ccaggaaagcctggtgcctccggaccacccggcaacaaaggggcgaagggtgacgtggtc
atatcaagagttaaagggcacaaaggagaaagaggtcctgatgggcccccaggatttcca
gggcagccaggatcacatggtctggatggacatgctggagaaaaaggggatccaggactc
ccaggggatcatgaagatgcgattccaggtgataaaggatttcctggacctctgggtccc
ccgggcaaagcaggacctgtgggccccccgggactgggatttcctggtccaccaggagag
cgaggccacccaggagttccaggctgcccaggtgtgaggggccctggtggcttgaagggt
cagaaaggtgacacaatttcttgcaacgtaacctatcccgggaggcaaggccctccgggt
tttgatggacctccaggtccaaagggatttccaggtccccaaggtgcccctgggctgagc
ggttcagatgggcataaaggcagacctggcacaccaggaacatcggaaataccaggtccc
cctggtttccgtggtgacataggagatccgggttttggaggtgaaaaggggtcttcccct
gttgggcccccaggcccccccgggtcaccaggagtgaatggtcagaaaggaatcccggga
gaccctgcatttggtcacctgggacccccgggaaggaggggtctttcaggagtgccaggg
ataaaaggacccagaggtgatccgggatatccaggggctgaagggccagctggcattcct
ggattcccaggtctcaaaggtcccaaaggcagagagggacatgctgggtttccaggtgtc
ccaggtccacctggccattcctgtgaaagaggtgctccaggaataccagggcaaccggga
ctccctggggatccaggtagcccaggtgctccaggtgggaaaggacagccaggagatgtg
gggcctcctgggccagctggaatgaaaggtctccctggactcccaggacggcctggggca
catggtcccccgggcctcccaggaatcccaggtccctttggggatgatgggctacctggt
cctccaggtccaaaaggcccccgggggctgcctggtttcccaggttttcccggagaaaga
ggaaagcctggtgcagagggatgtcctggcacaaagggagaacccggagagaagggcacg
tctggctttcccggagaccagggagtgagaggggccaaaggagccataggacctcccgga
gatgaaggagaaatggctatcatttccaaaaagggaaaacccggggaacctggacctcct
ggagatgatggattcccaggagaaagaggtgataaaggaactcccgggatgcaagggaga
agaggagagccgggaagatatggaccaccaggatttcacagaggggaacctggtgagaaa
ggtcagccagggcctcctggacacccaggccctccaggctcaactggtctaagagggttc
attggttttccaggacttccaggtgaccagggtgagccaggttctccaggtccccctgga
ttttcaggaatcgatggagcaacaggacctaaaggaaacaaaggtgaccctgccagtcac
tttggtccacctggtccaaagggtgagccaggtagctctggatgtccagggcattttgga
gcatccggagaccggggcttgcctggcgttcaagggcccagaggatcacccggaaggcca
ggaccacctggctcctctggaccaccagggtgcccaggtgatcaggggatgcctgggctg
aggggacagccaggagaaatgggagaccctgggccaagaggcctccagggggatccaggg
ataccaggtcctccaggaataaaaggtccctccggatcacctggcctgaacggcttacat
ggattgaagggtcagaaaggaaccaaaggtgcttcaggtttgcatgatgtggggccacct
ggtccagtgggaatgcctgggctaaaaggggagagaggagatcctgggagcccaggaatc
tctcctccaggtccttgtggagaaaaaggtctcccaggtcccccagggagatcaggacca
cctggtcctgcaggtgccacaggaagagcacctaaggacattcctgacccgggtccatct
ggagatcagggacctcctggtcccgatggcccaagaggagcacctgggcctccaggcctc
cctgggagtgttgacctcctgagaggggagccaggtgactgtggtctaccagggccacca
ggtctccccggcccaccaggccctccaggatacaaaggctttccaggatgtgatggaaaa
gatggccagaaaggaccaatgggattcccagggccgcagggaccacatggatttcctggg
ccacctggagagaagggtttacctggacctccagggagaaaagggcccactggtcttcca
ggtcccagaggtgaaccggggccacttgcagatgcgaatgactgtccccgaatcccaggg
cttcctggggtgccaggcctgagaggaccagaaggagccatgggactccctggaatgaga
ggccccccaggaccagggtgcaaaggagagcctgggctggacggcaggaggggcatggat
ggcattcctgggtctcctgggcctcccggacgtaaaggtgacacaggagaagacggctat
cccggaggaccagggcctcctggtcccactggggatcctgggcccaaagggtttggcgct
ggatacctcagtggcttcctactggttctccacagtcagacagaccaggagcccacctgc
cccctgggcatgcccaggctctggactgggtatagtctgttatacctggaaggacaagag
aaagctcacaatcaagaccttggtctggcagggtcttgccttcccgtgtttagcacgctg
ccctttgcctactgcaacatccaccaggtgtgccactatgcccagagaaacgacagatcc
tactggctggccagcgctgcacccctccccatgatgccactctctgaagaggcgatccgc
ccctatgtcagccgctgtgcggtatgcgaggccccggcccaggcggtggcggtgcacagc
caggaccagtccatccccccatgtccgcagacctggaggagcctctggattgggtattca
ttcctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtcacccggc
agctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcagggaact
tgccacttttttgcaaatgagtatagcttctggctgacaacagtgaaagcagacttgcag
ttttcccctgctccagcaccagacaccttaaaagaaagccaggcccaacgccagaaaatc
agccggtgccaggtctgtgtgaagtatagctag
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