Rhinopithecus roxellana (golden snub-nosed monkey): 104672339
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Entry
104672339 CDS
T03989
Symbol
SLX4
Name
(RefSeq) structure-specific endonuclease subunit SLX4 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
104672339 (SLX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rro04121
]
104672339 (SLX4)
03400 DNA repair and recombination proteins [BR:
rro03400
]
104672339 (SLX4)
Ubiquitin system [BR:
rro04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
104672339 (SLX4)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
104672339 (SLX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
104672339
NCBI-ProteinID:
XP_030781183
LinkDB
All DBs
Position
20:69681582..69711067
Genome browser
AA seq
1788 aa
AA seq
DB search
MDESDEDFKELCASFFQRVKKHGIKEVSGERKTQNASSNGTQIRRKLKRTKQTATKTKTL
QGPAEKKPPSGSQAPRTKKQGVTKWQASEPALSVNGEAGVLASAPDPPVLWETAQNTQTG
NQQEPSPNLSREETRENAPNSDSQPPPSCLTTAVPSPSKPRTAQLVLERMQQFKRADPER
LRHASKEGSLEAAQEENVAKDPQEEMMARNVFGLGPPAPESDAAVALTLQQEFARVGASA
HDDSLEEKGLFFCQICQKNLSAMNVTRREQHVNRCLDEAEKALRPSVPQIPECPICGKPF
LTLKSRTSHLKQCAVKMEVGPQLLLQAVRLQTAQPEGSSSLPVSSDHGGGLKRRGPASKK
EPRKRRKVDEAPSEDLLVAMALSRSEMEPCAAVPALRLESAFSERIKPEAEKKSRKKKPP
VSPPLLLVQDSETTGRQIEDRVALLLSEEVELSSTPPLPASRILKEGWERVGQCPPPPEC
KQNFLWEGSALTGAWATEAFYTARLVPPLVPQRPAQGLMQEPIPPLVPPEHSERRSPSLH
GTPPAGCGSRGLSPSASQREHQALQDLMDLAREGLSASPWPSSGGLAGSEGAAGLDVVPG
GLPLTGFVVPSQDKHLERGGRTSLSLGLLVADFGAMVNNPHLSDVQFQTDSGEVLYAHKF
VLYARCPLLIQYVNNEGFSAVEDGLLTQRVLLGDVSTEAACAFLHYLYTADTGLPPGLSS
ELSSLAHRFGVSELVHLCEQVPVTTDSGGKPWEEKEAENCESRAENFQELLRSMWADEEE
EAETLLKFKDHKEDQENVNEAEMEEIYEFAATQRKLLQEEKAVGAGEDADWLEGGSPVSG
QLLASVQVQERWDKVEEIQPSEPGRDEATTTWEKVGQRPLPPPQDQCSGARGAEAPEQEA
LGRSSCSSPSRGCRAERKEGPLPYSDDAGDYEQLFSSTQGESSEPSQVTSEPEERSGAVR
ERGLEVSHRLAPWQVSPPHPCRFLLGPPQGGSPHGSHQPHHTSGLSLSTPRSRGGTSQVG
SPTSLSPAMPSKQKRDRSILMLSKEPGHQKGTERRSMLECRNKGVLMSPEKSLSIDLTQS
NPEHLSSTPQKSSSKVNKEDEVILLLDSDEELELEQTKMKSISSDPLEERKALEISPRSC
ELFSVIDVDADQEPSHSPPRREAALQQEDEGALLENRGSLGSRGAPWLFCDRESSPGEGS
TTDTSWLVPATPLASRSRDCSSQTQISSLRSGLAVEAVTQHTPRASVGNREGNEAAQKFS
VIRTQTPPPQTPSSCLTPVSPGTSDGRRQGHKSPSRPHPGGHPHSSPLAPRPISGDRAHF
SRRFLKHSLPGPSFLSQTTVSEVVEVGDSDDEQEVASYQANSSPPLDSDPPIPVDDCCWH
MEPLSPIPIDHWNLERTGPLSTSSPSRRMKEATDSCDCRSLGLLDTTPIQGSCAARRKSQ
EKSLGAGSPGNSRLSFLNSALWDDWDGEEQRPPETPPLAQMLSVGGAQKPEGLETPKGVN
RKKDLPPKVPITPMPQYSIMETPVLKKELDRFGVRPLPKRQMVLKLKEIFQYTHQTLDSD
SEDDSQSSQPLLQAPRCRTLTSQTYKPSRAGAHAQQEATTGPGAHRPKGPAKTKGPRHQR
KHHESIAPAPPSRSPTKEAPPGLDDDAQLPASQESVATSVDGSDSSLSSQSSSSCEFGAA
FESAGEEEEGEEEVSASQAAVQAADTDEALRCYIRSKPALYQKVLLYQPFELGELQSELK
QNGLRVSSRRLLDFLDTHCITFTTAAARREKLRGRRRWPRGKKKAARN
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atggatgagtctgatgaggactttaaagaactctgcgctagctttttccaaagggtgaaa
aaacatggaatcaaggaagtgtcaggagaaaggaagacacaaaacgcctcctcaaacggc
actcagataagacgcaaattgaaaaggaccaaacaaactgctaccaagaccaaaaccctt
caaggccctgcagagaagaaacctccatctggcagccaggcccctaggactaaaaagcaa
ggggtaaccaaatggcaagcaagtgaaccagccctctctgtgaatggggaggcgggtgtg
cttgcctctgctccagatccgcctgtgctctgggaaacagcacaaaacacccagacgggt
aaccagcaagaaccatcgccaaacctttccagagaggaaaccagagagaatgcacccaac
agcgactctcagcctcctccttcctgtttgacaacagcagtgccaagtccctccaaaccc
cgcacagcacaattggtcctagagcgaatgcagcagttcaagagagcagaccccgagcgt
ttgagacatgcttcaaaagagggctccctcgaggctgcacaggaagaaaatgtcgcaaaa
gatcctcaagaggagatgatggcgaggaatgtgtttgggcttgggccccctgccccagag
agcgacgctgcggtggccttgaccctgcagcaggagtttgcacgggtaggagcgtcggca
catgatgatagcctggaggaaaagggtttgttcttctgccagatttgtcaaaagaacctc
tcagccatgaacgtgacccgaagggaacagcatgtaaacaggtgcctggatgaagctgaa
aaggcactaagaccttctgtgcctcagatccctgagtgcccgatttgtgggaaaccgttt
cttaccttaaagagcagaaccagccacttgaagcagtgtgctgtgaagatggaggttggc
ccccagctcctgctgcaggccgtgcggctgcagacagcacagcctgaggggagcagcagc
ctgccagtgtccagtgatcacggtggaggtctgaaacggagaggacccgccagcaagaag
gagccacggaagaggcggaaggtggacgaggcaccgtccgaggacctgctggtggccatg
gctctgtcccggtcggagatggagccatgtgcggctgtgccagcactcaggctggaaagt
gccttttctgagaggataaaaccagaagcagagaagaaaagtcgcaagaagaaaccccca
gtgtctcccccattgttgttagtccaggactctgaaaccacaggccgacagatagaggac
cgtgtggccctgctcctctctgaggaagtggaattgtctagcacgccaccacttcctgcc
agcaggattttaaaggaagggtgggaaagagtgggccagtgtcctcctccacctgaatgc
aagcagaactttctgtgggagggcagtgcactgactggggcctgggccacggaggccttc
tacacggccaggctggtccctcccctcgtgccccagcggcctgcccagggcctcatgcag
gagcccataccgccgctggtgccacctgagcactcagagcgaaggtcaccctctcttcac
ggcaccccccctgcaggctgtggctctagggggctgtcgccttcggccagccagagggag
caccaggccctgcaggacctcatggacctggcgagggagggactgagcgccagcccgtgg
cccagcagtgggggcctggctggctcggaaggggctgcagggttggacgtggtgcccggc
ggccttcctctgactgggtttgtggtgccatcgcaggacaagcacctggaaaggggcggc
cgcacctcgctctcccttggtctgctggttgctgactttggtgccatggtcaataaccca
cacctgagtgatgtccagttccagacagacagcggggaggtgctttacgcccacaagttc
gtgctttatgcccgatgcccgctcctcatccagtatgtgaacaacgaaggcttctctgct
gtagaggacgggcttctgacccagcgtgtcctgctgggtgacgtgagcaccgaggccgcc
tgcgcattcctgcactatctctataccgcggacactggccttcctcctggcctgagttct
gagctgagttccctggcccacaggtttggtgtgagcgagcttgttcacctgtgcgaacag
gtgcctgtcaccacggactcagggggcaaaccatgggaggagaaggaagccgagaattgc
gaaagcagggccgagaatttccaggaactcttgaggtcaatgtgggcagatgaagaggag
gaagcggagactttgttgaaattcaaggaccacaaagaagatcaagaaaacgtgaatgaa
gcagaaatggaagaaatttatgaattcgcagctactcagcgaaagctgctccaggaagaa
aaagcagtgggtgctggtgaggatgctgactggctggagggtggcagtccggtttctggg
cagctcctagcaagtgtccaggtgcaggaacggtgggacaaggtggaggagatacagccg
tcggagccaggaagagatgaggccaccaccacctgggagaaggtgggacagcgccctctc
ccaccaccccaggaccagtgctcaggggcacggggagcagaggcccccgagcaggaggcg
cttggccgttccagttgctccagcccttccaggggctgccgggcagagagaaaagaaggc
ccccttccgtactcggatgatgccggtgattacgaacagctcttctcatcaactcaggga
gagagctcagagccgtcccaagtaacaagtgagcctgaggaacgaagtggcgctgtcagg
gaaagggggctggaggtttctcatcgcctggctccctggcaggtgtctccaccgcacccg
tgccgcttcctattggggcctccccagggcgggagtccccacgggtctcatcagcctcat
cacacaagcgggttgtccctgtcgacaccccggtcccgcggcggaacttcccaggtgggc
tccccaacctcgctgtctccagctatgccatcaaagcagaaaagggacaggagcatcctc
atgctgtctaaagagccaggccaccagaaaggcacagagcgtcggtccatgctggagtgc
agaaataagggggtcctgatgtccccagaaaaatctctgtccattgacctaacccagtca
aaccctgagcatttgagctccacgcctcagaaatcttcatccaaagtgaacaaagaagac
gaggtcatcctcttactggactccgatgaggagctagagctagaacaaaccaaaatgaag
tccatttctagtgatcctctggaagaaaggaaagctctagaaattagccctaggtcctgt
gagctgttttccgtcattgacgtcgatgcagatcaggagccttcccacagcccaccaaga
agggaagctgcgctgcagcaggaggacgagggggcgctgctggagaaccggggctctttg
ggcagcagaggggctccctggctgttctgtgaccgtgagagcagccccggcgagggcagc
accacagacacctcatggctggtgcccgccaccccgctggccagcagaagccgcgactgt
tcttcccagacccaaatcagcagcctcaggagcgggctggccgtggaggcggtgacacag
cacacgcccagggcctcggtaggaaacagggaagggaacgaggctgcacagaagttttcc
gtcatcaggacccagacaccaccgccccagacaccgtcctcttgcctcactcccgtctct
ccaggaacttctgatggcagaaggcaaggccacaaaagcccttcccgtccccaccctggg
ggccacccgcactcctctccgctggctccacgtcccatctcaggggaccgcgcccacttc
agcaggcggttcctgaaacactctctgcctgggccaagcttcctgagccagaccacagtg
agtgaagtggtggaagtcggggacagtgacgatgagcaggaggtggcctcctatcaggcc
aacagcagtcccccgctggacagtgaccctccaattccagttgacgactgctgctggcac
atggagcccctctcgccaattcccattgatcactggaacctggagcggaccggccccctg
agcaccagcagccccagccgcaggatgaaggaggccaccgacagctgtgactgccgctcc
ctgggactcctggacaccacccccatccaaggaagctgcgctgcccggaggaaatcgcaa
gagaagtccttgggcgcgggttccccggggaacagcaggctgagctttctgaattcggct
ctgtgggacgattgggacggggaagagcagaggcctccagagacccctcctctagcgcag
atgctaagcgtcggtggagctcagaagcccgaagggttagagacacccaaaggtgtaaat
cggaagaaggacttgccccccaaagtgcccataacaccgatgccacagtattccattatg
gagacaccggtgctgaagaaggaactggataggtttggagtccgccctctgcctaaacgc
cagatggttctgaagctgaaggagatattccagtacactcaccagaccctagactcagac
tctgaggatgacagccagtcctcacagccgctactgcaggcgcctcgctgccggaccctc
acctcccagacctacaagccttcaagggcaggggcccatgcccagcaggaggccaccaca
ggacccggggcccataggcccaagggacctgctaagaccaagggcccccgacatcaaagg
aagcatcatgaaagcatcgcacctgcacccccaagcaggtcgcccaccaaggaggcacct
ccaggccttgatgatgatgcccagctcccagcctcccaggaatccgtggccacttctgtg
gacggcagtgacagctccttgagctcacagagttcttcctcctgtgagtttggagcggca
tttgagtctgcaggtgaagaggaggagggtgaggaggaggtcagcgcctcgcaggcagcc
gtgcaggcggcggacacggacgaggcgctgagatgctacatccgctccaagccggccctg
taccagaaggtgctgctgtaccagccctttgagctgggggagctgcagtcggagctgaag
cagaacggcctccgtgtatcctcgcgcaggctgctggatttcctggacacccactgtatc
accttcaccaccgccgctgcccgcagggagaagctccggggcaggaggcggtggcctcgg
ggcaagaagaaggcggcacggaactga
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integrated database retrieval system
