Rhinopithecus roxellana (golden snub-nosed monkey): 104673426
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Entry
104673426 CDS
T03989
Symbol
SYMPK
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03015
mRNA surveillance pathway
rro04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104673426 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
104673426 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rro03021
]
104673426 (SYMPK)
03019 Messenger RNA biogenesis [BR:
rro03019
]
104673426 (SYMPK)
Transcription machinery [BR:
rro03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
104673426 (SYMPK)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
104673426 (SYMPK)
U7-dependent histone pre-mRNA processing factors
104673426 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
Motif
Other DBs
NCBI-GeneID:
104673426
NCBI-ProteinID:
XP_010375756
UniProt:
A0A2K6NPT8
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All DBs
Position
12:complement(105735451..105783569)
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AA seq
1274 aa
AA seq
DB search
MASGSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEIPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSSKDTRKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISSQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
VVKTESVLIKRRLSAQGQAISVVGSLSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFNSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGSLDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEAPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGMGAPSSSSSSLSPSARPGPPPSEEAMDFREEGPECET
PGIFISMDDDSGLTEAALLDSSLEGPLPKETAASGLTSKEERSPQTLAPIGEDVVKTPSP
AAEDAREPEAKGNS
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtggcagtggggacagcgtcacccgccggagtgtggcatcacagtttttcact
caagaggaggggccgggaattgatggcatgaccacctcagagagggtggtggatcttctg
aaccaggcggcgctgatcaccaatgactcaaagatcacagtgctcaaacaggtccaggag
ctgatcatcaacaaagatcccacactactggacaacttcctggacgagatcatcgcattc
caagcagacaagtcaatcgaagtgcgaaaatttgtcatcggcttcatcgaggaggcatgc
aagcgagacattgagttgctgctgaaactcattgcaaacctcaacatgctcttgagggat
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccaactttacaaggtggcc
ctgcagtggatggtgaagtcacgggtcattagcgagctacaagaggcctgctgggacatg
gtatctgccatggcgggggacatcatcttactgttagactctgacaatgacggcatccgc
acccatgctatcaagtttgtggagggcctcattgtcaccctgtcaccccgcatggctgac
tcggagataccccgacgccaggagcatgatatcagcctggaccgcatccctcgtgaccac
ccctacatccagtacaacgtactatgggaagagggcaaggcagccttggagcagctgctt
aagttcatggtgcaccctgccatctcttccatcaatctgaccacagcgctgggctccctc
gccaatatcgcccgccagagacccatgttcatgtctgaggtgatccaggcctatgaaact
ctgcatgccaacctgcccccgacgctggccaaatcgcaggtgagcagcgtgcggaagaat
ctgaagctgcacctgttgagtgtgctgaagcacccagcctccttggagttccaggcccag
atcaccaccctgctagtggacctgggcacacctcaggctgagatcgcccgcaacatgcca
agcagcaaggacacccgcaagcggccccgcgatgactcggactccacactcaagaagatg
aagctggagcccaacctgggggaggatgatgaggacaaggacttggaaccaggcccatca
gggacctcgaaggcctcagcccagatctccagccagtcagacacggacatcacagctgag
ttcctgcagcctctgctgacgcctgataatgtggccaatctggtcctcatcagcatggtg
tacctgcccgaggccatgccagcctccttccaggccatctacacccctgtggagtcagca
ggcacagaagcccaaatcaagcacctggctcggctcatggccacacagatgacagctgcc
ggactgggaccaggtgtagagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gtggtgaagacggagagtgtcctgatcaagcgacgcctgtcagcccagggccaagccatc
tcggtggtgggctccctgagctccatgtcccctctggaggaagaggcaccgcaggccaag
aggagaccagagcccattatccctgtcactcagccccggctggcaggcgccggtgggcgc
aagaaaatattccgtctcagcgacgtgctgaagcccctgactgatgcccaggtggaagcc
atgaagctgggcgctgtgaagaggatcctgcgggctgagaaggctgtggcctgcagcggg
gcagcccaggtccgcataaagatcctggccagcctggtgacacagttcaactcgggcctg
aaggcagaggtcctgtccttcatcctggaggatgtgcgggcccgcctggacctggccttc
gcctggctctaccaggagtacaacgcctatctggccgcgggtgcctcaggctccctggac
aagtatgaggactgccttatccgcctgctgtccggcctgcaggagaaaccagaccagaag
gatgggatcttcaccaaggttgtgctagaagcgccactcatcacagagagtgccctggag
gtgatccgcaagtactgcgaggatgagagtcgcacctatctgggcatgtccacacttcga
gacctgatcttcaagcgcccgtcccgccagttccagtacctgcatgtccttcttgacctc
agctcccatgagaaggataaggtgcgctcccaggccctgctgttcatcaaacgcatgtat
gagaaggagcagctgcgggagtatgtagagaaatttgccctcaactacctgcagctcctg
gtgcaccccaacccaccgtctgtgctgtttggagctgacaaagacacagaagtggcagcg
ccctggacggaggagacagtgaagcagtgtctctacctctacctggctctcctgcctcag
aaccacaagctgatccacgagctggcagccgtgtacactgaagccatcgccgacatcaag
cggacagtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactccccggag
ctgctcctgctggtggaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacagacaaagtcccaccctccccggagctggtgaagcgggtccgggatctc
taccacaagcgactgccagacgtccgcttcctcatcccggtgctcaatgggctggagaag
aaagaggtgatccaggccctgcctaaactcatcaaactcaaccccatcgtggtgaaggaa
gtcttcaaccgcctgctgggcacccagcatggtgagggaaactcggccttgtccccgctg
aaccctggagagctcctgatcgcattacacaacatcgactccgtgaagtgtgacatgaaa
tccatcatcaaagccaccaacctgtgctttgcggagcggaacgtgtacacgtcagaggtg
ctggccgtggtgatgcagcaactgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtccctgaccatgtacccccgcctggggggcttcgtcatgaacatcttg
tcccgcctcatcatgaagcaggtgtggaagtaccccaaagtgtgggagggcttcatcaag
tgctgccagcgcaccaagccccagagcttccaggtcatcctgcagctgccgccccagcag
ctgggagccgtctttgacaagtgccctgagctccgggagcctctgctggcccatgtccgc
tccttcaccccccaccagcaagctcatatccctaactccatcatgaccatcttggaggcc
agcggtaagcaggagccagaagccaaggaagcgcctgcggggcccttggaggaggacgac
ctggagcctctggccttggccccggccccggccccccggcccccacaggacctcattggc
ctgcggctggcccaggagaaggccttaaagcggcagctggaggaggagcagaagctgaag
cctggaggaatgggagccccctcctcttcctcctcctctctctctccctcggcccggccg
ggcccgcccccatctgaggaagccatggatttccgggaggaggggcctgagtgcgagacc
cctggcatcttcatcagcatggatgacgactcagggctgaccgaggccgcgctgttggac
tctagtctcgagggccccctacccaaggagacggcagcgagcggcctgacctctaaggag
gagcggagtccccagaccctggcacctattggagaagatgtcgtgaagacccccagcccg
gctgctgaggacgccagggaacccgaggccaaggggaacagctga
DBGET
integrated database retrieval system
