Rhinopithecus roxellana (golden snub-nosed monkey): 104674621
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Entry
104674621 CDS
T03989
Symbol
VPS16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X2
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04140
Autophagy - animal
rro04148
Efferocytosis
rro05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104674621 (VPS16)
04148 Efferocytosis
104674621 (VPS16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104674621 (VPS16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rro04131
]
104674621 (VPS16)
Membrane trafficking [BR:
rro04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104674621 (VPS16)
Hops complex
104674621 (VPS16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
104674621
NCBI-ProteinID:
XP_010377297
UniProt:
A0A2K6RA00
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Position
13:complement(100734223..100767433)
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AA seq
839 aa
AA seq
DB search
MDCYTANWNPLGDSAFYRKYELYSMDWDLKEELRDCLVAAAPYGGPIALLRNPWRKEKAA
SVRPVLDIYSASGMPLASLLWKSGPVVSLGWSAEEELLCVQEDGAVLVYGLHGDFRRHFS
MGNEVLQNRVLDARIFHTEFGSGVAILTGAHRFTLSANVGDLKLRRMPEVPGLQSAPSCW
TALCQDRVAHVLLAVGPDLYLLDHAACSAVTPPGLAPGVSSFLQMAVSFTYRHLALFTDT
GYIWMGTASLKEKLCEFNCNIRAPPKQMVWCSRPRSKERAVVVAWERRLMVVGDASESIQ
FVLDEDSYLVPELDGVRIFSRSTHEFLHEVPAASEEIFKIASMAPGALLLEAQKEYEKES
QKADEYLREIQELGQLTQAVQQCIEAAGHEHQPDMQKSLLRAASFGKCFLDRFPPNSFVH
MCQDLRVLNAVRDYHIGIPLTYSQYKQLTIQVLLDRLVLRRLYPLAIQICEYLRLPEVQG
VSRILAHWACYKVQQKDVSDEDVARAINQKLGDTPGVSYSDIAARAYGCGRTELAIKLLE
YEPRSGEQVPLLLKMKRSKLALSKAIESGDTDLVFTVLLHLKNELNRGDFFMTLRNQPMA
LSLYRQFCKHQELETLKDLYNQDDNHQELGSFHIRASYAAEERIEGRVAALQTAADAFYK
AKNEFAAKATEDQMRLLRLQRRLEDELGGQFLDLSLHDTVTTLILGGHNKRAEQLARDFR
IPDKRLWWLKLTALADLEDWEELEKFSKSKKSPIGYLPFVEICMKQHNKYEAKKYASRVG
PEQKVKALLLVGDVAQAADVAIEHRNEAELSLVLSHCTGATDGATADKIQRARAQAQKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggactgctacacggcgaactggaacccactcggggactctgctttttaccggaaatat
gagctgtacagcatggactgggacctgaaggaggaactcagagattgcctggtggctgct
gcaccctatgggggccccattgcactgctgaggaacccctggcggaaggagaaagctgcc
agtgtgaggccagtgctcgatatatactctgcttccggcatgcccctggccagcctgctg
tggaagagtggacccgtggtgtccctgggctggtcagctgaggaggagctgctctgtgtg
caggaagatggtgctgtactggtttacgggcttcatggtgacttccggagacatttcagc
atgggcaatgaagtgctccagaaccgcgttctggatgcccggatctttcatactgagttt
ggttctggagtggccatcctcacaggggcccaccgcttcaccctcagtgccaatgtgggt
gacctcaaactccgccggatgccagaggtgccaggtctgcaaagtgcaccctcctgctgg
actgcgctgtgccaggaccgagtggcacacgttcttctggctgtggggcctgatctttat
cttttggaccatgcagcctgctccgcagtgacgccccctggcctggccccaggagtaagc
agcttcctacagatggctgtctccttcacctaccgacacctggcactcttcacggacaca
ggctacatctggatgggaacggcatcactcaaggagaagctatgtgagttcaactgcaac
atccgggcacctccaaagcagatggtctggtgcagccgtcctcgtagcaaggagagggcc
gtggtggtggcctgggagaggcggctgatggtggtgggcgatgcatctgagagcatccag
tttgtgctggacgaggactcctacctggtgcctgagcttgatggggtccgcatcttctcc
cgcagcacccacgagttcctgcatgaggttccagcggccagcgaggagatcttcaaaatt
gcctcaatggcccccggggcgctgctcctggaggctcagaaggagtatgagaaagagagc
cagaaggcggacgagtacctgcgggagatccaggagctgggccagctgacccaggctgtg
cagcagtgcattgaggctgcaggacatgagcaccagccagacatgcagaagagtctgctc
agggctgcttccttcggaaagtgtttcctggacagatttccacccaacagcttcgtgcac
atgtgtcaggacctgcgtgtgctcaatgctgttcgggactatcacattgggatcccactc
acctatagccaatacaagcaactcaccatccaggtgctgctggacaggcttgtgttgcgg
aggctttaccccctggccatccagatatgcgagtacttgcgccttcctgaagtacagggc
gtcagcaggatcctggcccactgggcctgctacaaggttcaacagaaggatgtctcagat
gaggatgtggctcgagccattaaccagaagctgggggacacgcctggtgtctcttactcc
gacattgctgcacgagcctatggctgtggccgcacagagctggccatcaagctgctggag
tatgagccacgctcaggggagcaggtaccccttctcctaaagatgaagaggagcaaactg
gcactaagcaaggccattgagagcggggacactgatctggtgttcacggtgttgctgcac
ctgaagaatgagctgaaccgaggagattttttcatgacccttcgaaatcagcccatggcc
ctgagtttgtaccgacagttctgtaagcatcaggagctagagacgctgaaggacctttac
aatcaggatgacaatcaccaggaattgggcagcttccacatccgagccagctatgctgca
gaagagcgtattgaggggcgagtagcagctctgcaaacagccgccgatgccttctacaag
gccaagaatgagtttgcagccaaggctacagaggatcaaatgcgactcctacggctgcag
cggcgcctagaagacgagctggggggccagttcctagacctgtctctacatgacacggtt
accaccctcattcttggcggtcacaacaagcgtgcagagcagctggcacgtgacttccgc
atccctgacaagaggctctggtggctgaagctgactgccctggcagatttggaggactgg
gaagagctagagaagttttccaagagcaagaaatcacccattggctacctgccttttgtg
gagatctgcatgaaacaacacaacaaatatgaagccaagaagtatgcttcccgtgtgggt
cccgagcagaaggtcaaggctttgcttcttgttggcgatgtggctcaggctgcagatgtg
gccatcgaacaccggaatgaggctgagctgagcctcgtattgtcccactgcacgggagcc
acagatggggccacagctgacaagattcaacgggccagggcacaagcccagaagaagtaa
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