Rhinopithecus roxellana (golden snub-nosed monkey): 104675733
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Entry
104675733 CDS
T03989
Name
(RefSeq) collagen alpha-6(VI) chain
KO
K06238
collagen type VI alpha
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151
PI3K-Akt signaling pathway
rro04510
Focal adhesion
rro04512
ECM-receptor interaction
rro04820
Cytoskeleton in muscle cells
rro04974
Protein digestion and absorption
rro05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
104675733
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104675733
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104675733
09142 Cell motility
04820 Cytoskeleton in muscle cells
104675733
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
104675733
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
104675733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rro04147
]
104675733
00536 Glycosaminoglycan binding proteins [BR:
rro00536
]
104675733
Exosome [BR:
rro04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
104675733
Glycosaminoglycan binding proteins [BR:
rro00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104675733
Hyaluronan
Extracellular matrix or blood plasma proteins
104675733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
vWA_SIBA-E
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
104675733
NCBI-ProteinID:
XP_010378694
LinkDB
All DBs
Position
1:178671894..178824036
Genome browser
AA seq
2262 aa
AA seq
DB search
MKMLLILFLMIISSHISVNQDSGPEYADVVFLVDSSDRLGSRSFPFVKMFITKMISSLPI
EADKYRVALAQYSDKLHSEFHLSTFKGRSPMLNHLKKNFGFIGGSLQIGKALQEAHRTFF
SAPTNGRDKKQFPPILVVLASSESEDDVEEASKALQKDGVKIISVGVQKASEENLKAMAT
SQFHFNLRTVRDLSMFSQNMTHIIKDVTKYKEGAVDDIFVEACQGPSMADVVFLLDMSIN
GSDENFDYLKGFLEESVSALDIKENCMRIGLVAYSNETKVINSLSMGINKSEVLQHIQNL
SHQTGKAYTGAAIKKLRKEVFSARNGSRKNQGVPQIAVLVTHRDSEDNVTKAAVNLRREG
VTIFTLGIEGASDTQLEKIASHPAEQYVSKLKTFADLAAHNQTFLKKLRNQITHTVSVFS
ERTETLKSGCVDTEEADIYLLIDGSGSTQATDFHEMKTFLSEVVGMFNIAPHKVRVGAVQ
YADSWDLEFEINKYSNKQDLGKAIENIRQIGGNTNTGAALNFTLSLLQKAKKQRGNKVPC
HLVVLTNGMSKDSILEPANRLREEHIRVYAIGVKEANETQLREIAGEEKRVYYVHDFDAL
KDIRNQVVQEICAEEACKEMKADIMFLVDSSGSIGPENFSKMKTFMKNLVSKSQIGPDRV
QIGVVQFSDINKEEFQLNRFMSQSDISNAIDQMAHIGQTTLTGSALSFVSQYFSPTKGAR
PNVRKFLILITDGEAQDIVKEPAVALRQEGVIIYSVGVFGSNVTQLEEISGRPEMVFYVE
NFDILQRIEDDLVFGICSPREECKRIEVLDVVFVIDSSGSIDYDEYNIMKNFMIDIVKKA
DVGKNRVQFGALKYADDPEVLFYLDNFGTKPEVISVLQNDQAMGGSTYTAEALGFSDHMF
TEARGSRLNKGVPQVLIVITDGDSHDADKLNATAKALRDKGILVLAVGIADANPVELLAM
AGSSDKYFFVETFGGLKGITSDVTASVCNSSKVDCEIDKVDLVFLMDGSTSIQQTDFKKM
KEFLVSVVQDFDVSPNRVHIGAAQFSDAYRPEFPLGTFIGAKEISFQIENITQIFGNTHI
GAALRKVEHYFRPDMGSRINTGTPQVLLILTDGQSQDEVAQAAEALRHRGIDIYSVGIGD
VDDQQLIQITGTAEKKLTVHNFDELKKVNKRIVRNICTTGSESNCFMDVVVGFDVSTQEK
GQTLLEGQPWMETYLQDILRAISSLNGVSCEVGTETQVSVAFQVTNAMEKYSPKFEIYSE
NILNSLKDITVKGPSFLNANLLDSLWDTFQNKSAARGKVVLLFSDGLDDDTEKLEQKSDE
LRKEGLNALITVALDGPADSSDLADLPYIEFGKGFEYRTQLSIGMRDLGSRLSKQLVNVA
ERTCCCLFCKCIGGDGSMGDPGPPGKRGPPGFKGSEGYLGEEGIAGERGAPGPVGEQGTK
GCYGTKGPKGNRGLNGQEGEAGESGIDGLNGEQGDYGLPGRKGEKGDEGSQGSPGKRGIP
GDHGAKGLRGDPGAPGVDNNIEGPTGLKGERGREGRRGWPGPPGTPGSRRRTAAHGRRGH
TGPQGTAGIPGPDGLEGSLGLKGPQGPRGEAGAKGEKGGVGSKGPQGPPGPGGEAGNQGH
FGSQGNKGEPGDLGEKGAIGFPGPRGLQGDDGSPGYGSVGRKGAKGQGGFPGESGPKGET
GDPGGPGETGLKGARGKTISAGLPGEMGSPGEPGPPGRKGVKGAKGLASFSTCELIQYVR
DRSPGRRGKTECPVHPTELVFALDQSRDVTEREFERMKEMMAFLVKDIKVRENSCPVGAR
IAILSYNSHARHLVRFSDAYKKNQLLREIEAIPYERSSSSREIGRAMRFISRNVFKRTLP
GAHTRRIATFFSSGQSADSQSITTAAMEFSALEIIPVVITFSNVPSVRRAFAIDDTGTFQ
VIVVPSGADYIPALERLQQCTFCYDVCKPDASCDQARPPPVQSYMDAAFLLDGSRNVGSA
EFEDIRAFLGALLDHFEITPEPETSVTGDRVALLSHAPPDFLPNTQKSPVRAEFNLTTYS
SKRLMKRHVDESVKQLNGDAFIGHALQWTLDNVFLTAPNLRRNKVIFVISAGETSHLDGE
ILKKESLRAKCQGYALFVFSLGPTWDDKELEDLASHPLDHHLVQLGRIHKPDHSYGVKFV
KTFINSIRRAINKYPPINLKIKCNRLNSADPRQPLRHFRSFVPGPYKATLKEDVLQKAKF
FQDKKYLSRVARSGRDDAIQNFIRNTSHTFMNGRRVTKSAPK
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgttgctaattttgttcctcatgataatttcttcccatatttctgtgaaccaa
gattctggccctgagtatgcagatgtcgtgtttctggtggacagctccgatcgcctggga
tccaggtccttcccatttgtgaaaatgttcatcaccaaaatgatcagcagtctccctata
gaggctgacaaataccgcgtggccctcgcccagtacagtgataaacttcacagtgaattc
cacctgagcaccttcaaaggcaggagccccatgctgaaccacctcaagaagaactttgga
ttcattggtgggtccctgcagataggaaaggctcttcaggaggctcacaggacttttttc
tctgcacccacaaatgggagagacaagaaacagtttcccccaattctagtggtcctggct
tcatctgagtctgaggatgatgtggaagaggcttcgaaggccctgcagaaagacggagtg
aaaatcatctccgtaggggtgcagaaagcttctgaggaaaacctgaaggccatggccacg
tctcagtttcatttcaaccttcggacagtcagagacctcagcatgttttcccaaaacatg
acgcacatcatcaaggatgtaacaaagtacaaggagggagcagttgatgacatctttgta
gaagcttgccaaggcccttctatggccgatgttgtgttcctattggatatgtcaatcaat
ggaagcgacgagaactttgactatcttaaaggattcttggaagaaagtgtatctgccctt
gacataaaggaaaattgcatgaggattggccttgtggcctatagcaatgagacaaaagtg
ataaattcactgagcatgggcataaataagtcagaggttctccagcatatacagaacctt
tctcaccagactgggaaggcctatactggagctgccatcaaaaagctcaggaaggaagtc
tttagtgcacggaatggcagtcggaagaatcagggggtgccccagattgccgtgctggtg
acccaccgagattcggaagacaacgtgacaaaagcagctgttaacctccgacgggagggt
gtgaccatcttcaccctgggcatagagggggccagcgacacccagttggaaaagatagca
tcccaccctgctgagcagtatgtctccaaactgaagaccttcgctgacctggctgctcac
aaccagacgtttctgaagaagctgcggaaccaaataacacacacagtctctgtcttttca
gagaggaccgaaacgctcaaatctggttgtgtggacactgaggaagcagacatctatctg
ctcatcgatggctcagggagcacccaggccacagatttccatgaaatgaagaccttcctg
tcagaggtggtagggatgttcaacattgccccccataaggtgcgggttggggccgttcag
tatgctgacagctgggacttggaattcgagatcaataaatactccaacaagcaggatttg
ggaaaggccattgagaatatcaggcagataggtgggaatacaaatacaggtgcagcactg
aatttcacactgagtctgttgcaaaaagcaaagaaacagcgaggaaacaaagttccatgt
caccttgttgtcctgacaaatggcatgtccaaggatagcatcttggagcctgcaaacaga
ctgagagaagagcacatccgagtttatgctatcggggttaaggaggccaacgaaacacag
ctgcgagaaattgcaggagaggaaaagagagtgtattacgtgcatgactttgacgcattg
aaagacataagaaaccaagttgttcaagaaatctgtgctgaagaagcttgcaaagagatg
aaagctgacatcatgtttctggtggacagttctggaagtataggacctgaaaacttcagc
aaaatgaaaacatttatgaaaaacctggtgagcaagtctcagattggaccagatcgggtg
caaattggtgtagtccagttcagtgacatcaataaggaggagtttcagctcaacagattc
atgtcccaaagcgacatttcaaatgcaatagaccaaatggctcacattggacaaaccacc
ctgactggtagtgccctgagctttgtgtctcagtacttcagccccaccaagggcgcccgg
cccaacgtcagaaagtttctcatccttatcacggatggtgaagctcaggacatagtaaag
gaaccagcggtagcgcttcggcaagaaggtgtgatcatctactctgtgggagtgtttggc
tccaatgtcactcagcttgaggagatcagtgggaggcccgagatggttttttatgttgag
aattttgacattctgcagcgcattgaagatgatcttgtttttggaatatgcagcccccgt
gaagaatgcaagcggattgaagttttagatgttgtgtttgtcattgatagctctggcagc
attgactatgatgagtataatatcatgaagaattttatgattgacatagtgaaaaaagct
gatgtgggcaagaatcgggtccagtttggggctctgaagtatgctgatgacccagaggtg
ctgttttatctggataactttggcacaaaaccggaggtaatttcagtgctccagaatgac
caagccatgggtggcagtacttatactgctgaggcactgggcttctcggaccacatgttc
actgaagcccggggcagtcgcctgaacaagggggtcccccaagtcctcattgtgatcacc
gatggggattcccatgatgctgataagctcaatgccacagcaaaggccttgcgagacaaa
ggcattcttgtcctggctgtgggtattgctgatgccaatcccgtggaactgttagctatg
gcaggatcaagcgacaagtacttcttcgtggagacttttggaggtctgaagggaataact
tcagatgtgacagccagtgtctgcaactcttcaaaagtagattgtgaaattgacaaagta
gatcttgttttccttatggatggttcaactagcattcagcaaactgacttcaagaaaatg
aaggaatttctggtatccgttgttcaagactttgatgtcagccccaacagagtgcatata
ggagcggcccagtttagcgatgcctatcgcccagagtttccactgggaactttcataggt
gcaaaagagatatcatttcagattgaaaacatcacgcagatctttggaaacacgcacatc
ggtgccgcactcaggaaggtggaacattacttcaggccagacatgggcagcaggataaat
acaggtaccccgcaggtgttgctgatccttacagatggccagtcccaagacgaggtggcc
caggccgcggaagccctgagacacagaggtatcgacatctactctgtgggcattggggat
gtggatgaccagcagctcattcagatcaccgggactgcagagaaaaaactgacagtgcac
aacttcgatgaactgaagaaggtcaataaaaggatcgttcgcaacatctgtaccacaggg
agtgaaagcaactgtttcatggatgttgtggtgggatttgatgtctcaactcaggagaaa
gggcagactttgcttgaaggtcagccttggatggaaacctaccttcaagacatcttacgt
gccatcagctccctcaatggagtaagctgtgaggtgggtacagagactcaggtcagtgtg
gcttttcaagtgacaaatgccatggaaaaatattctcccaagtttgagatctacagtgaa
aacatactgaatagcttgaaggatataacagttaaaggaccatcgtttctcaatgcaaac
ctcttggattctctatgggatacatttcagaataaatcggctgctcgaggaaaggtggtc
cttttattttcagatggattggatgatgatactgagaaacttgaacaaaaatctgatgaa
cttagaaaagaaggcctgaatgcactcataactgttgctctggatggacctgctgattca
agtgacttggctgatcttccctatattgaatttgggaaaggatttgagtacaggacgcag
ctctctattggcatgagagatcttgggagccgtctgtcaaagcagctagtcaacgttgct
gaaaggacatgctgctgtttgttctgcaagtgcattggaggagatggctcaatgggggat
cctggaccaccagggaaaaggggacctccaggttttaaaggcagtgaaggctacctggga
gaggagggaatcgctggagaaagaggagctcctggaccagtgggagagcaaggtactaag
ggatgctatggcaccaaaggtcctaagggaaacaggggactaaacggacaggagggagaa
gctggggaaagtggaattgatggactaaacggagaacagggtgattatggtcttcctgga
agaaaaggagaaaagggtgatgagggatcccagggaagcccagggaagagagggattcct
ggtgaccatggagcaaagggcctgcgaggggaccccggggctcctggagttgataataac
atagaaggacccacaggcttgaaaggagaacgtggaagagaaggtagaagaggctggcca
ggcccccccgggacaccaggctccagaagaaggacagcagctcatggcagaaggggacat
acaggtccacagggaacagcaggcatcccaggaccagatggacttgaaggctccctggga
cttaagggccctcagggcccaagaggagaggctggtgcgaaaggagaaaaaggaggtgtg
ggaagtaaaggtccccagggacctccaggacccggaggagaggcagggaatcaaggccat
ttcggaagccaaggaaataaaggtgaacctggagatctgggagaaaaaggagctattggc
tttcctggtcctcgtggcttgcagggcgatgatggcagtccaggttatggtagtgtcgga
cgcaaaggagcaaagggacaaggaggattccctggagaaagtggacctaagggtgagact
ggggaccctggtggtccaggagagactgggctgaagggagctagaggcaaaacgatatct
gctgggcttccaggagagatgggatcccctggggaaccaggacctcctggacgtaagggt
gtgaaaggagccaaaggcttggcttcattttctacatgtgagctcattcagtatgtgcga
gaccgcagtcctggcagacgtggaaaaaccgaatgcccagtgcacccaactgagttagtg
tttgccctggaccagtcccgggatgtcactgagcgggaattcgagcggatgaaggagatg
atggctttcctggtgaaagacattaaagtccgggagaacagctgccccgtgggagcgcgc
atagccatcctctcctataactcccacgccaggcacctcgtgcgcttctcagatgcctac
aagaagaatcaacttctcagggaaattgaagctattccttatgagagatcctcttccagc
cgggagattggcagagcaatgcggtttatttccaggaatgtcttcaagcggacgcttccg
ggggcgcacacgagaagaattgccacatttttcagcagcggtcagtctgcggattcccag
tccatcactacggctgccatggagttcagcgcgcttgaaatcattcccgtggtgatcact
ttcagcaacgtgccttcggtcaggcgtgcatttgcgattgacgacactggcacatttcaa
gtaatagtggttccctctggagccgactacataccagcattagagagactccagcagtgc
actttctgctacgatgtatgcaagccagatgcttcttgtgaccaagccagaccaccccct
gtgcaatcttacatggatgctgctttccttctggatggctcccggaacgtgggaagtgct
gaatttgaagacataagagctttcctgggagcactattagatcactttgaaatcacccca
gagccggagacttctgtcactggagaccgggtggccctattgagccatgctccccccgac
ttcctacccaacactcagaagagtccagttagagctgagttcaatcttaccacctatagc
agtaagcgcctcatgaagaggcatgtggatgagtcagttaaacaactaaacggagatgct
tttattggtcatgccttacagtggactctggacaatgtctttttaactgcacccaatctg
agaagaaacaaagtcatatttgtgatatctgctggggaaaccagccacttagatggggaa
atcttaaagaaggaatctttgcgagccaaatgtcaagggtatgccctatttgtgttttcc
cttggccctacttgggatgacaaggaactggaggatctcgctagccaccctttggatcac
cacctggtccagcttggccgaattcataaacctgaccacagttatggtgtgaagtttgtg
aagacctttataaactcaatcaggcgtgcaatcaacaaatatccaccaataaacttaaaa
ataaagtgcaatagacttaactctgcagatccaaggcagcccctgcgacatttccgaagc
tttgttcctggaccatataaagctactctcaaagaagatgtattacagaaggcaaaattc
tttcaagataaaaaatatctttcaagagtagcaagaagtggcagagatgatgctattcaa
aattttatcagaaacacctcccatacctttatgaatggaagaagggtgacaaaaagtgct
cccaaatga
DBGET
integrated database retrieval system
