Rhinopithecus roxellana (golden snub-nosed monkey): 104678133
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Entry
104678133 CDS
T03989
Symbol
LSM2
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03018
RNA degradation
rro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104678133 (LSM2)
09123 Folding, sorting and degradation
03018 RNA degradation
104678133 (LSM2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104678133 (LSM2)
03041 Spliceosome [BR:
rro03041
]
104678133 (LSM2)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104678133 (LSM2)
mRNA degradation factors
5'-3' decay
Lsm complex
104678133 (LSM2)
Spliceosome [BR:
rro03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104678133 (LSM2)
Complex C
U2 snRNP components
104678133 (LSM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DYW_deaminase
Motif
Other DBs
NCBI-GeneID:
104678133
NCBI-ProteinID:
XP_010381643
UniProt:
A0A2K6P670
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Position
4:complement(25363636..25373981)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLTDISVTDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEALQQKQ
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctcttctattcttttttcaagtcccttgtgggcaaggatgtagtggtggaactcaag
aatgacctgagcatctgtggaacactccattctgtggatcagtatctcaacatcaaacta
actgacatcagtgtcacagaccctgagaaatatcctcacatgttatcagtgaagaactgc
ttcattcggggctcagtggtccgatacgtgcagctgccagcagatgaggtcgacacacag
ttgctgcaggatgcggcaaggaaggaagccctgcagcagaaacagtga
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