Rhinopithecus roxellana (golden snub-nosed monkey): 104678352
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Entry
104678352 CDS
T03989
Symbol
TARBP1
Name
(RefSeq) probable methyltransferase TARBP1 isoform X1
KO
K15333
tRNA guanosine-2'-O-methyltransferase [EC:
2.1.1.34
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rro03016
]
104678352 (TARBP1)
03036 Chromosome and associated proteins [BR:
rro03036
]
104678352 (TARBP1)
Enzymes [BR:
rro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.34 tRNA (guanosine18-2'-O)-methyltransferase
104678352 (TARBP1)
Transfer RNA biogenesis [BR:
rro03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104678352 (TARBP1)
Chromosome and associated proteins [BR:
rro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104678352 (TARBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoU_methylase
TARBP1
Retrotran_gag_2
Motif
Other DBs
NCBI-GeneID:
104678352
NCBI-ProteinID:
XP_030792032
LinkDB
All DBs
Position
8:complement(98690692..98775079)
Genome browser
AA seq
1621 aa
AA seq
DB search
MEWVLAEALLSQSRDPRALLGALCQGEASAERVETLRFLLQRLEDEEARGGGGAGALPEA
AREVAAGYLVPLLRSLRGRPAGGPDPGLPPRYRRRVLRAAGAALRSCARLAGGPQLAAAL
AEEALRDLLAGWRAPGAEAAVEVLAAVGPCLRPREDGPLLERVAGAAVALALGGGGDGDE
AGPAEDSAALVAGRLLPVLVQCGGAALRAVWGGLAAPGTSPGSGRVEEKLLVLSALAEKL
LPEPGGDRARSAREAGPDARRCWRFWRTVQTGLGQADALTRKRARYLLQRAVEVSAELGT
DCTCGPLEGNGPSLFWWSEKKKDELLKFWENYILIMETLEGNQIHVIKPVLPKLNNLFEY
AVSEENGCWLFHPSWHMCIYKRMFESENKILTKEGVIHFLELYETKILPFSPEFSEFIIG
PLMDALSESSLYSRSPGQPIGSCSPLGLKLQKFLVTYISLLPGDIKSNFLLKFIRKMTSR
HWCAVPILFLSKALANVPKYKALGIDGLLALRDVIHCTMITHQILLRGAAQCYLLQTAMN
LLDVEKVSLSDVSTFLMSLRQEESLGRGTSLWTELCDWLRVNESYFKPSPMCSSIGLHKS
SLNAYVKSLIQEYVKSSAWETGENCFMPDWFEAKLVSLMVLLAVDVEGMKTQYSGKQRTE
NVLRIFLDPLLDVLMKFGTNVYMPLLKTDRCLQLLLKLLNTCRLKGSSAQDDEVFTVLQN
FVMSTTESISEFILRRLTMNELNSVSDLDRCRLYLMVLTELINLHLKVGWKRGNPIWRVI
SLLKNASIQHLQEMDSAQEPTLGSQIQRVVSMAALAMVCEAIDQKPELQLDSLHAGPLES
FLSSLQLNQTLQKPHAEEQSSYAHPSECTSVLEESSSSQGWGKIVAQYIHDQWVCLSFLL
KKYHTLIPSTGSEILEPLLPAVQRPIRTLQSALEALTVLSSDQVLPVFHCLKVLVPKLLT
SSESLCIESFDMAWKIISSLSNTQLIFWPNLKAFVQFVFDNKILTIAAKIKGQAYFKIKE
IMYKIIEMSAIKTGVFNTLISYCCQSWIVSASNVSQGSLSSAKNYSELILEACIFGTVFR
RDQRLVQDVQTFIENLGHDCAANTVMENTKREDHYVRICAIKFLCLLDGSNMSHKLFMED
LAIKLLDKDEFVSKSKKRYYVNSLQHRVKNRVWQTLLVLFPRLDQNFLNGIIDRIFQAGF
TNNQASIKYFIEWIIILILHKFPQFLPKFWDCFSYGEENLKTSICTFLAVLSHLDVVTQN
IPEKKLILKQALIVVLQWCFNHNFSVRLYALVALKKLWTACKVLSVEEFDALTPVIESSL
HQVESMHGAGNAKKNWQRIQEHFFFATFHPLKDYCLETIFYILPRLSGLIEDEWITIDKF
TRFTDVPLDAGFQWYLSQTQLSKLKPGDWSQQDIGTNLVEADNQAEWTDVQKKIIPWNNR
VPDLDLELLFQDRAARLGKSISRLIVVASLIDKPTNLGGLCRTCEVFGASALVVGSLQCI
SDKQFQHLSVSAEQWLPLVEVKPPHLIDYLQQKKTEGYTIIGVEQTAKSLDLTQYCFPEK
SLLLLGNEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSGALLIWEYTRQQLLSQGDTK
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atggagtgggtgctcgcggaagcgctgctctcgcagagccgggacccgcgggccctgctt
ggggcgctgtgccaaggggaggcatccgcggagcgcgtggaaacgctgcgcttccttctg
cagcggctcgaggacgaggaggcgcgcggcggcgggggcgcaggcgcgctcccggaggcg
gcgcgcgaggtggccgcagggtacctcgtgccactgctgcggagcctgcgcgggcgccca
gcgggcggcccggaccccggtctgccgcctcgctaccgccggcgcgtgctgagggcggcg
ggcgcggccctgcgctcgtgcgcccgcctggctgggggtccgcagctggcggccgcgctg
gcggaggaagcgctgcgcgatctgctcgccgggtggcgcgcgcctggcgccgaggctgcc
gtggaggtgctggcggccgtcgggccttgtttgcggccacgcgaggacgggccactgctg
gagcgcgtggcaggggccgccgtcgccctggcgctaggcgggggcggggatggggatgag
gccgggcccgccgaggactcagcggcgctagtggccgggcgactgctgccagtgctggtc
caatgcggcggggcggcgctgcgggccgtgtggggcgggctggccgcgcccgggacgtcc
ccggggtcaggccgcgtagaggagaagctgctggtcctgagcgccctggccgagaagctg
ctacccgagcccggcggcgatcgcgcccgcagcgcgcgcgaggcgggcccggacgccagg
cgctgctggcgcttctggaggaccgtgcagacggggctgggccaggcggacgccctgacg
cgcaagcgagcgcgctacctactgcagagggcggtagaggtgtcggcggagctggggacc
gactgcacctgcgggcccctggaaggaaacggcccaagtctgttttggtggtctgagaag
aaaaaagatgaacttctgaagttttgggaaaattatattttaattatggagactttagaa
ggaaatcagatacatgttataaagccagttttaccaaagctaaacaatctgtttgaatat
gcggtgtcagaggaaaatggatgctggctctttcacccatcctggcatatgtgtatttat
aaaagaatgtttgaaagtgaaaacaaaatcctgaccaaagaaggtgttatccattttttg
gagctgtatgaaacaaagattcttccattttcaccagaattttctgagtttattattgga
ccattaatggatgcactttcagagagctctctgtatagcaggtccccaggccagccgata
ggaagctgttctccattgggactgaaattacagaagtttttagtcacgtatatttctctt
cttccaggagacataaagagtaacttcctattgaagtttattcggaagatgacaagtagg
cattggtgtgctgttcccattttatttctatctaaggctttggcaaatgtcccaaaatat
aaggccctgggtatagatgggcttcttgctctcagggatgttattcattgcactatgatc
acacatcagattctcctgagaggggcagcccaatgctaccttcttcaaacagctatgaat
ttgctagatgtggagaaagtgtcactttctgatgtctcaacttttctcatgtctctgaga
caagaggagtccttaggacgaggaacttcattgtggacagagctgtgtgactggctacgt
gttaatgaaagctattttaagccatccccaatgtgtagctccattggacttcacaagtcg
tctttaaatgcttatgtgaagagccttattcaagagtatgttaagtcatctgcttgggaa
acaggagaaaactgctttatgcctgattggtttgaagccaagcttgtttctctgatggtc
ttgctggctgtggatgtggaaggaatgaagactcaatatagtggaaagcagagaacagag
aatgtattgcggatattcttagatcctcttctggatgtgcttatgaagtttggtaccaat
gtctacatgcccttgctgaagactgacagatgcctccagttgctgttgaagctattgaac
acatgcaggttgaaaggttccagtgcccaagatgatgaggtgtttactgttcttcagaac
tttgtcatgtctactacagagagcatttctgaatttattctcagacgacttaccatgaat
gagctaaatagtgtttcagatctggaccgttgccgtttatacctgatggtgttaaccgag
cttataaatctgcatttgaaggttgggtggaaaagaggtaaccctatttggagagttatt
tctcttttgaaaaatgcgtccattcagcatcttcaagagatggacagtgcacaggagcca
acacttggaagtcagattcagagagtagtgagtatggctgccttggccatggtgtgtgag
gccatagaccagaagcctgagctgcagctggactctctccatgctgggcccctggaaagc
ttcctttcctctcttcagctcaatcagacactgcagaagccccacgcagaggagcagagc
agttatgctcacccctcggagtgtaccagtgttttagaagaatcgtcatcttcccaagga
tggggaaaaatagttgcacaatatattcatgatcaatgggtgtgcctctctttcctgttg
aaaaaatatcacacccttataccaagcacagggagtgaaattctggaaccgcttctgcct
gccgttcagaggccaatcaggactttgcagtctgcactagaagccctcaccgttctttct
tctgatcaagttttaccagtgttccattgcttgaaagtgttggttcccaagcttctgacc
tcctctgaatcactctgcatagagtcttttgacatggcttggaaaattatatcttcttta
agcaacactcagctgatattctggcctaatttaaaagcttttgttcagtttgtttttgat
aacaaaattcttaccattgctgccaaaatcaaaggccaggcatatttcaaaataaaagag
attatgtacaagataattgaaatgtctgctataaagactggagtcttcaatacactgata
agttactgctgtcagtcttggatagtgtctgcttcaaatgtgtcccaaggatctttatca
agtgctaaaaattatagcgaacttatccttgaggcttgtatatttggaactgtgtttagg
cgtgatcaaagacttgttcaggatgtacagaccttcatagaaaaccttggacatgactgt
gcggcaaatactgttatggaaaatactaagagagaagaccattatgtgagaatttgtgcc
atcaaattcctgtgtttattagatggctccaatatgtcccataagttgtttatggaagat
cttgcaatcaagctattagataaagatgaattcgtgtccaagtccaaaaaacgctactat
gtgaattctctgcagcacagagtgaaaaaccgcgtctggcagactctgcttgtacttttc
cctagactcgatcagaatttcttgaatggaattattgacaggattttccaggctggtttc
accaacaatcaagcatccataaaatattttatagaatggattattatattgattcttcat
aaattccctcaatttcttccaaagttctgggattgtttttcttatggtgaagaaaatctt
aaaacaagcatttgtacatttttagcagttttatcacatttggacgttgttactcaaaac
attccagaaaagaaactaattctgaagcaagcccttattgttgtgctgcagtggtgcttc
aatcacaattttagtgttcgactgtatgctttagttgctcttaagaaactctggactgcg
tgtaaagtgttaagtgttgaagaatttgatgccctgactcctgtgattgaatccagcctc
catcaagtggaaagcatgcacggggcagggaatgccaagaagaattggcagcgcattcaa
gagcatttcttttttgcaacatttcacccactcaaggattattgtctagagaccatattt
tacatccttccacgcctttcaggccttattgaagatgagtggatcaccattgataaattt
accagattcactgatgttcctttagatgcgggatttcagtggtacctttctcaaactcaa
cttagtaaactaaaaccaggtgactggtctcagcaggacataggtactaatttggtcgaa
gcagataaccaagcagagtggactgacgttcagaagaagattatcccgtggaacaatcgt
gttcccgacttagacctggagctcctgtttcaggatcgtgctgccagacttggaaagtca
attagtagactcatcgtcgtggcctcgctcatcgacaaaccaaccaatttaggaggactg
tgcaggacctgtgaggtatttggggcttcggcgctcgttgttggcagccttcagtgtatc
agcgacaaacagttccagcacctcagtgtctccgccgaacagtggctccctctagtggag
gtaaaaccacctcacctaattgattatctgcagcagaagaaaacagaaggttataccatc
attggagtggaacaaactgccaaaagtttagacctaacccaatattgctttcctgagaaa
tctctactcttgttgggaaatgaacgtgagggaattccagcaaatctgatccagcagttg
gacgtttgtgtggaaattcctcaacagggcattatccgctccctgaacgtccacgtgagt
ggcgccctgctgatctgggagtacaccaggcagcagctgctctcgcagggagacaccaag
ccatga
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integrated database retrieval system
