Rhinopithecus roxellana (golden snub-nosed monkey): 104678498
Help
Entry
104678498 CDS
T03989
Symbol
AFDN
Name
(RefSeq) LOW QUALITY PROTEIN: afadin
KO
K05702
afadin
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04014
Ras signaling pathway
rro04015
Rap1 signaling pathway
rro04024
cAMP signaling pathway
rro04520
Adherens junction
rro04530
Tight junction
rro04670
Leukocyte transendothelial migration
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
104678498 (AFDN)
04015 Rap1 signaling pathway
104678498 (AFDN)
04024 cAMP signaling pathway
104678498 (AFDN)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104678498 (AFDN)
04530 Tight junction
104678498 (AFDN)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
104678498 (AFDN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RA
DIL
PDZ
FHA
PDZ_6
RA_3
RA_2
PDZ_2
RASSF8-10_RA
Yop-YscD_cpl
Motif
Other DBs
NCBI-GeneID:
104678498
NCBI-ProteinID:
XP_030784468
LinkDB
All DBs
Position
4:complement(150210122..150352407)
Genome browser
AA seq
1808 aa
AA seq
DB search
MSAGGRDEERRKLADIIHHWNANRLDLFEISQPTEDLEFHGVMRFYFQDKAAGNFATKCI
RVSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERRLDIDEKPLVVQLNWNK
DDREGRFVLKNENDAIPPKKAQSNGPEKQEKEGVIQNFKRTLSKKEKKEKKKREKEALRQ
ASDKDDRPFQGEDVENSRLAAEVYKDMPETSFTRTISNPEVVMKRRRQQKLEKRMQEFRS
SDGRPDSGGTLRIYADSLKPNIPYKTILLSTTDPADFAVAEALEKYGLEKENPKDYCIAR
VMLPPGAQHSDEKGAKEIILDDDECPLQIFREWPSDKGILVFQLKRRPPDHIPKKTKKHL
EGKTPKGKERADGSGYGSALPPEKLPYLVELSPDGSDSRDKPKLYRLQFSVTEVGTEKLD
DSSIQLFGPGIQPHHCDLTNMDGVVTVTPRSMDAETYVEGQRISETTMLQSGMKVQFGAS
HVFKFVDPSQDHALAKRSVDGGLMVKGPRHKPGIVQETTFDLGGDIHSGTALPTSKSTTR
LDSDRVSSASSTAERGMVKPMIRVEQQPDYRRQESRTQDASGPELILPASIEFRESSEDS
FLSAIINYTNSSTVHFKLSPTYVLYMACRYVLSNQYRPDISPPERTHKVIAVVNKMVSMM
EGVIQKQKNIAGALAFWMANASELLNFIKQDRDLSRITLDAQDVLAHLVQMAFKYLVHCL
QSELNNYMPAFLDDPEENSLQRPKIDDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFI
NMWLFNRLVTDPDSGLCSHYWGAIIRQQLGHIEAWAEKQGLELAADCHLSRIVQATTLLT
MDKYAPDDIPNINSTCFKLNSLQLQALLQNYHCAPDEPFIPTDLIENVVAVAENTADELA
RSDGREVQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGLQEFLDPLCQRGFCRLIPHTRSP
GTWTIYFEGADYESHFLRENTELAQPLRKEPEIITVTLKKQNGMGLSIVAAKGAGQDKLG
IYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTSSVVTLEVAKQGA
IYHGLATLLNQPSPMMQRISDRRGSGKPRPKSEGFELYNNSTQNGSPESPQLPWAEYSEP
KKLPGDDRLMKNRADHRSSPNVANQPPSPGGKSAYASGTTAKITSVSTGNLCTEEQTPPP
RPEAYPIPTQTYTREYFTFPASKSQDRMAPPQNQWPNYEEKPHMHTDSNHSSIAIQRVTR
SQEELREDKAYQLERHRIEAAMDRKSDSDMWINQSSSLDSSTSSQEHLNHSSKSVTPAST
LTKSGPGRWKTPAAIPATPVAVSQPIRTDLPPPPPPPPIHYAGDFDGISMDLPLPPPPST
NQIGLPSAQVAAAERKKREEHQRWYEKEKARLEEERERKRREQERKLGQMRTQSLNPAPF
SPLTTQQMKPEKPSTLQRPQETVIRELQPQQQPRTIERRDLQYITVSKEELSSGDSLSPD
PWKRDAKEKLEKQQQMHIVDMLSKEIQELQSKPDRSAEESDRLRKLMLEWQFQKRLQESK
QKDEDDEEEEDDDVDTMLIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEERRR
QEEERTKRDAEEKRRQEEGYYSRLEAERRRQHDEAARRLLEPEAPGLCRPPLPRDYEPPS
PSPAPGAPPPPPQRNASYLKTQALSPDSLFTAKFVAYNEEEEEEDCSLAGPNSYPGSAGA
AVGAHDAYRDAKEKRSKSQDADLPGSSGAPENLTFKERQRLFSQGQDVSNKVKASRKLTE
LENELNTK
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgggcggccgtgacgaggagcggcggaagctggcggacatcatccaccactgg
aacgccaaccggctggacctgttcgagatcagccagccgaccgaggatttggagttccat
ggagtgatgagattttattttcaagataaagctgctggaaactttgcaacaaaatgtatt
cgggtctctagtactgccaccactcaagatgtaattgaaacgctcgcagagaaatttcga
cctgatatgcggatgctgtcctctcccaagtattcactctatgaagtgcatgtcagcgga
gaagaaagaagattggacatagatgagaaacctctagttgtacaattgaattggaacaaa
gatgaccgggaaggcagatttgttcttaagaatgagaatgacgccattcctcctaagaag
gctcaaagtaatggacctgaaaagcaggaaaaagaaggagttatccagaacttcaagaga
actctgtcaaagaaagaaaagaaggaaaaaaagaagagagaaaaagaggcattgcgacag
gcgtctgataaagatgatagacctttccaaggggaggacgttgaaaattctcgactggct
gctgaggtttacaaagacatgcctgaaaccagctttactcgaaccatttctaatcctgag
gtggttatgaaacgacggaggcaacaaaaattggaaaagagaatgcaggaatttcggagc
tcagatgggcggcctgattcaggtggaacattgagaatttatgcagatagtttaaaacca
aatattccctacaagacaatcctgctgtctactacagatcctgcagactttgctgtggct
gaagctttagagaagtatggtctggaaaaagaaaaccctaaggattactgcatcgcccgg
gttatgcttcctcctggagcccagcattctgatgaaaagggtgctaaagaaattattctt
gatgatgatgagtgtcctttacaaatcttcagggaatggccaagtgacaaagggatttta
gtctttcagttgaagaggaggccaccagaccacatcccaaagaaaaccaagaaacatttg
gaaggcaagacacccaagggaaaggagagagctgacgggtctggctatggctccgccctt
cctccagagaagctgccctatttagtagagttaagcccagatggttctgactctagagat
aagccaaagctttaccgccttcagttcagtgttactgaagttggtacagaaaaactggat
gacagctctatccagttgtttggcccaggaattcagccccatcactgtgacctcaccaac
atggatggagtggtcactgtgacgcccagaagtatggacgcagaaacctatgtagaaggc
cagcgcatctcggaaaccaccatgctgcagagtggcatgaaagtgcagtttggggcatcc
catgtatttaagtttgtggaccccagtcaggatcatgctcttgcaaaaagatctgtggat
ggaggcctgatggttaagggcccgagacataaacctggaattgttcaggagacaactttt
gatttgggaggagatattcatagtgggacagcattaccgacaagcaagagcaccactagg
ctggacagcgacagagtgtcatctgcctctagtacagccgagcggggaatggtgaagccg
atgatcagagtagagcagcagccagattatcgcaggcaagaaagcagaacacaggatgct
tctgggcctgaactgatactgcctgcaagcattgaattcagggaaagttctgaagattca
tttttatctgccattataaattatactaatagctctacagtccactttaagttgtcccct
acatatgtattatatatggcatgccggtatgtattgtccaaccagtacagacctgacatc
agccctccagagcgcacacataaagtcattgcagtcgtcaacaagatggtgagcatgatg
gagggcgtcatccagaaacagaagaatattgcaggggcacttgccttctggatggcaaat
gcatctgaacttctcaacttcattaagcaagaccgagaccttagtcggatcacattggat
gctcaagatgttttagcacatttggttcaaatggcatttaaatacttggttcactgtctt
cagtcagaacttaataattacatgccagcctttctagatgaccctgaagagaacagtctg
caaagaccaaaaatagatgatgtgctgcacacgctcacaggagccatgtccttgctacga
cgctgcagagtcaatgccgccctgaccatccagctcttctctcagcttttccactttatc
aatatgtggctgttcaatagattagtgactgacccagattcagggctgtgctcccattac
tggggcgcaattatccgtcagcagctgggccatattgaagcctgggctgagaagcagggc
ctggagctggctgcagactgtcatctgagcaggatcgtgcaggcaacaactttgcttacc
atggataagtatgcacctgatgacattccaaatataaacagcacctgctttaagttaaat
tcactacaacttcaagccttattacagaactatcactgtgcacctgatgagccttttatc
ccaacggatcttatagaaaatgtagtggctgtggctgaaaacactgctgatgagctggcc
cgcagcgatggaagggaagtgcagttggaggaggatcctgacctacagctgccgtttctt
ttgccagaagatggttattcttgtgatgttgtcagaaacattccaaatggtttacaagaa
tttttagatcctctgtgccagagaggattttgcaggttaattcctcacacacgttcacca
ggtacttggacaatatattttgaaggtgcagattatgaaagtcactttctgcgtgagaac
acagagctggctcagccgctgaggaaagaacctgaaataatcactgtgaccctaaaaaag
cagaatggaatgggccttagcattgttgcagcaaagggtgctggtcaagataaactagga
atctatgtgaagtcggttgtgaaaggaggtgctgcagatgtggatggacgtctagctgca
ggtgatcaactcctcagcgtggatggacgaagtctggttggactctctcaggaaagggca
gcagaactcatgacaagaacaagctctgtggtgacactggaagtagcaaagcagggtgcc
atctaccacggtctggccacccttctcaatcagccatcccccatgatgcagagaatttca
gatcgtcgtggctcaggtaaaccccgaccaaagagtgaaggctttgaactctataataat
tccactcaaaatgggtctcctgagagtcctcagctgccttgggcagaatatagtgaacca
aagaaattgcccggtgatgacagactgatgaaaaatagagctgatcaccgttccagcccc
aacgtagcaaatcagcctcctagtcctggagggaaaagtgcatatgcctctggaacaaca
gcgaagataacatctgtctctactggaaacctctgcactgaggagcagacgcctccgcct
agacctgaagcctaccccatccccactcagacgtacaccagagagtattttaccttccca
gcttccaaatcccaagatcggatggcccctcctcagaaccagtggccaaattatgaggaa
aagccacatatgcacacagatagtaatcactccagtattgcaattcagcgtgttacacgt
tcccaagaagaacttcgagaagataaagcttaccaacttgagcggcatcgaatagaggca
gctatggacagaaagtctgatagtgatatgtggataaatcagagttcctcattggactcc
agtacgtctagccaagagcacctgaaccattcctctaagtcggtcacccccgcttccaca
ctgaccaaaagtggccctggccgttggaaaacaccagcagcaataccggccacccctgtg
gccgtctcccagccaatccgaacagacctgcctccgccacccccgccacctcccatccac
tatgccggtgatttcgatggaatatccatggatttgcctctcccaccacccccttccacc
aaccagataggactgccgtctgcgcaggtggctgctgccgaacggaaaaagagagaagaa
catcagcgttggtatgagaaggagaaggcccgcctggaggaggagcgggagaggaagcgg
agagagcaggagaggaagctgggccagatgcgcactcagtccctaaaccctgctccgttt
tctcccctgaccacacagcagatgaagcccgaaaagccttccacactccagcggccccag
gaaacagtcattcgggagctacagcctcagcagcagccccgcacgatcgagcgcagggac
ttgcagtacatcacagtcagcaaagaggagctttcctcgggggacagtctgtcccctgac
ccgtggaagcgggatgccaaggagaagctggagaagcagcagcagatgcacatcgtggac
atgctgagcaaggagatccaggagctccagagcaaaccagaccgcagcgccgaggagagt
gaccggctgcgcaagctcatgctggagtggcagttccagaagagactacaggagtcgaag
cagaaggacgaagatgacgaggaggaggaggacgacgatgtggataccatgctcatcatg
cagcgcctggaggctgaacgaagagcgagggacgaggagcggaggcggcagcagcagtta
gaagagatgcgcaagcgggaagcggaagaccgagcgaggcaagaggaagagcgccggcgg
caggaggaggagcgaacaaaacgagacgctgaagaaaagaggcgacaggaagaagggtat
tacagccgcctggaagctgagaggcgcagacagcacgacgaggcggcgcgcaggttgctg
gagcccgaggcacctggtctgtgccgccctccgcttccccgggactacgagcccccgtcc
ccgtcccccgcgcccggcgcccctcctcccccgcctcagcgaaacgcctcctacctcaaa
acccaggccctctcccccgactcgctgttcactgccaagtttgttgcatacaatgaggag
gaggaggaggaggactgcagcctagcaggaccaaactcttacccgggatctgctggagca
gctgttggagcccatgacgcttaccgggatgcgaaagagaagcgttctaaaagccaagat
gcagatttacctggaagttctggggcccctgaaaacttgacattcaaggaacgccagcgt
cttttttcacaaggtcaagatgtatccaataaagtgaaagcctctcgtaaattaacagaa
ctggagaatgaactgaacacaaaatga
DBGET
integrated database retrieval system
