Rhinopithecus roxellana (golden snub-nosed monkey): 104679113
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Entry
104679113 CDS
T03989
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro00100
Steroid biosynthesis
rro01100
Metabolic pathways
Module
rro_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
104679113 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rro01006
]
104679113 (FDFT1)
Enzymes [BR:
rro01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
104679113 (FDFT1)
Prenyltransferases [BR:
rro01006
]
Terpene biosynthesis
Squalene/phytoene synthase
104679113 (FDFT1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
104679113
NCBI-ProteinID:
XP_010382891
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All DBs
Position
9:complement(123995635..124030871)
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AA seq
468 aa
AA seq
DB search
MAAAACGTKAMALFKRTLVLSPAAAPRGPGAGTAPRGCCLPPAAWPCKDWPRGEGGRLWS
RLPQSHSHSCSSTSPTAVCLVCPQDSLSSSLKTCYKYLNQTSRSFAAVIQALDGEMRNAV
CIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTIS
LEFRNLAEKYQTVIADICQRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSA
SEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQEGREFWPQEVWSRYVKKLGDFAKP
ENIDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQV
FKGAVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQ
NLPNCQLISRSHYSPLYLSFVMLLAALSWQYLTTLSQVTEDFVQTGEH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcaccaaggccatggccctcttcaagcgcaccttggtgctg
agtcccgccgcggcgcccaggggcccgggcgcaggcaccgccccgcggggctgctgcttg
cctcctgcagcctggccctgcaaggactggccccggggagagggcggcaggctgtggagc
cgcctgccccagtcccactcccactcctgctcctcgacgtctcccaccgccgtgtgtctt
gtctgcccgcaggactcgctcagcagcagcctgaaaacttgctacaagtatctcaatcag
accagtcgcagtttcgcagctgttatccaggcgctggatggagaaatgcgcaacgcagtg
tgcatattttatctggttctccgagctctggacacactggaagatgacatgaccatcagt
gtggaaaagaaggtcccgctgttacacaactttcactctttcctttaccaaccagactgg
cggttcatggagagcaaggagaaggatcgccaggtgctggaggacttcccaacgatctcc
ctggagtttagaaatctggctgagaaataccaaacggtgattgccgacatttgccagaga
atgggaattgggatggcagaatttttggataagcatgtgacctctgaacaggagtgggac
aagtactgccactatgtcgctgggttggtaggaattggcctttcccgtctcttctcggct
tcagagttcgaagaccccttagttggtgaagatacggaacgcgccaactctatgggcctg
tttctgcagaaaacaaacatcattcgtgactatctggaagaccagcaagaaggaagagag
ttttggcctcaagaggtttggagcaggtatgttaagaagttaggggattttgccaagccg
gagaatattgacttggccgtgcagtgcctgaatgaacttataaccaatgcactgcaccac
atcccagatgtcatcacctacctttcgagactcagaaaccagagtgtgtttaacttctgt
gctattccgcaggtgatggccattgccactttggctgcctgttacaataaccagcaggtg
ttcaaaggggcagtgaagattcggaaagggcaagcggtgaccctgatgatggatgccacc
aacatgccagctgtcaaagccatcatatatcagtatatggaagagatttatcatagaatc
cccgactcagacccatcttctagtaaaacaaggcagatcatctccaccatccggacgcag
aatcttcccaactgtcagctgatctcccgaagccactactcccccctctacctgtcgttt
gtcatgctcttggctgccctgagctggcagtacctgaccacactctcccaggtcacagaa
gactttgttcagactggagaacactga
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