KEGG   Rhinopithecus roxellana (golden snub-nosed monkey): 104679242
Entry
104679242         CDS       T03989                                 
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
  KO
K06237  collagen type IV alpha
Organism
rro  Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04151  PI3K-Akt signaling pathway
rro04382  Cornified envelope formation
rro04510  Focal adhesion
rro04512  ECM-receptor interaction
rro04518  Integrin signaling
rro04820  Cytoskeleton in muscle cells
rro04926  Relaxin signaling pathway
rro04933  AGE-RAGE signaling pathway in diabetic complications
rro04974  Protein digestion and absorption
rro05146  Amoebiasis
rro05165  Human papillomavirus infection
rro05200  Pathways in cancer
rro05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:rro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    104679242 (COL4A1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104679242 (COL4A1)
   04518 Integrin signaling
    104679242 (COL4A1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104679242 (COL4A1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104679242 (COL4A1)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    104679242 (COL4A1)
  09154 Digestive system
   04974 Protein digestion and absorption
    104679242 (COL4A1)
  09158 Development and regeneration
   04382 Cornified envelope formation
    104679242 (COL4A1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    104679242 (COL4A1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    104679242 (COL4A1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    104679242 (COL4A1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    104679242 (COL4A1)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    104679242 (COL4A1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rro04147]
    104679242 (COL4A1)
   00536 Glycosaminoglycan binding proteins [BR:rro00536]
    104679242 (COL4A1)
Exosome [BR:rro04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   104679242 (COL4A1)
Glycosaminoglycan binding proteins [BR:rro00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104679242 (COL4A1)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 104679242
NCBI-ProteinID: XP_010383047
UniProt: A0A2K6NU22
LinkDB
Position
18:complement(3042037..3197317)
AA seq 1669 aa
MGPRLSVWLLLLPAALLLHEEHSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGERGPLGPPGLPGFAGNPGPPGLPGMKGDPGEILGHVPGMLLKGERGFPGL
PGNPGPPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVQEKGDFATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGDKGEKGS
PGFPGEPGYPGLVGRQGPQGEKGEAGPPGPPGIVIGTGPLGEKGERGYPGTPGPRGEPGP
KGFPGLPGQPGPPGLPVPGQAGAPGFPGERGEKGDRGFPGASLPGPSGRDGLPGPPGSPG
PPGQPGYTNGIVECQPGPPGDQGPPGIPGQPGLIGEIGEKGQKGESCLICDTTGYRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGVAGVPGPQGTPGLIGQPGAKGEPGEIYFDLRLK
GDKGDPGFPGQPGIPGRAGSPGRDGRPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGYGPTGPIGDKGQAGFPGGPGSPGLPGPKGEPGKVVPLPGPPGAEGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGAVGQQGIGFPGPPGPKGVDGLPGDVGPPGTPGRPGFNG
LPGNPGVQGQKGEPGVGLPGLKGLPGLPGIAGTPGEKGSVGVPGVPGEHGAIGPPGLQGI
RGEPGPPGLPGSVGSPGVPGIGPPGARGPPGGQGPPGLSGPPGIKGEKGFPGFPGLDMPG
PKGDKGSQGLPGVTGQSGLPGLPGQQGSPGIPGFPGSKGEMGVMGTPGQPGSPGPVGVPG
LPGEKGDHGFPGSSGPRGDPGLKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIG
PIGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGISGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGSPGSPGEKGAKGAKGQAGPPGIGIPGLPGEKGDQGIAGFPGSPGE
KGEKGSIGIPGMPGSPGLKGSPGSVGYPGSPGLPGEKGDKGLPGLDGIPGVKGEAGLPGT
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGDKGSKGEVGFPGLAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGSPGRATEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
IDGVKGDKGNPGWPGAPGVPGPKGDPGFQGMPGIGGSPGITGSKGDMGPPGVPGFQGPKG
LPGLQGIKGDQGDQGVPGAKGLPGPPGPPGPYDIIKGEPGLPGPEGPPGLKGLQGPPGPK
GQQGVTGLVGIPGPPGIPGFDGAPGQKGEMGPTGPTGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTIDDPQCPSGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq 5010 nt   +upstreamnt  +downstreamnt
atggggccccggctcagcgtctggctgctgctgctgcccgccgcccttctgctccacgag
gagcacagccgggccgctgcgaagggtggctgtgctggctctggctgtggcaaatgtgac
tgccatggagtgaagggacaaaagggcgaaagaggcctcccagggttacaaggtgtcatt
gggtttcctggaatgcaaggacctgaggggccgcagggaccaccaggacaaaagggtgat
actggagaaccaggactacctggaacaaaagggacaagaggacccccgggagcatctggc
taccctggaaacccaggacttcccggtattcctggccaagacggcccaccaggcccccca
ggtattccaggatgcaatggcacaaagggagagagagggccgctcgggcctcctggcttg
cctggtttcgctggaaatcccggaccaccagggttaccaggaatgaagggtgatccaggt
gagatacttggccatgtgcccgggatgctgttgaaaggtgaaagaggatttcccggactc
ccagggaatccaggtccaccaggattgccaggacttcaaggtcctgttgggcctccagga
tttaccggaccaccgggtcctccaggtcctcccggccctccaggtgaaaagggacaaatg
ggcttaagttttcaaggacccaaaggtgacaagggtgaccaaggggtcagtgggcctccg
ggagtaccaggacaagcccaagttcaagaaaaaggagattttgccaccaagggagaaaag
ggccaaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccc
ggaaaaccaggacccagaggaaaacctggaaaagatggtgacaaaggggaaaaagggagt
cccggttttcctggtgaacccgggtacccaggactcgtaggccgccagggcccgcaggga
gaaaagggtgaagcaggtcctcctggcccaccaggaattgttataggcacagggcctttg
ggagaaaaaggagagcggggctaccctggaactccagggccaagaggagagccaggcccg
aaaggtttcccaggactaccaggccaacccggacctccaggcctccctgtacctgggcag
gctggtgcccctggcttccctggtgaaagaggagaaaaaggtgaccgaggatttccgggt
gcatctctgccaggaccaagtggaagagacgggctcccgggtcctcctggttcccccggg
ccccctgggcagcctggctacacaaatggaattgtggaatgtcagcccggacctccaggt
gaccaaggtcctcctggaattccagggcagccaggattgataggcgaaattggagagaaa
ggtcaaaaaggagagagttgcctcatctgtgatacaactggatatcgggggcctcccggg
ccacagggacccccaggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggtttgcctggcagagatggtgttgcaggagtgcctgggcctcaaggtacaccagggctg
ataggccagccaggagccaagggggagcctggtgagatttatttcgacctgcggctcaaa
ggtgacaaaggagacccaggctttccaggacagcccggcataccagggagggcgggttct
cctggaagagatggccgtccgggtcttcctggccccaagggctcgccgggttctgtagga
ttgaaaggagagcgtggcccccctggaggagttggattcccaggcagtcgtggtgacacc
ggcccccctgggcctccaggatatggtcctactggtcccattggtgacaaaggacaagca
ggctttcctggaggccctgggtccccaggcctgccaggtccaaagggtgaaccaggaaaa
gttgttcctttaccaggcccccctggagcagaaggactgccggggtccccaggcttccca
ggtccccaaggagaccgaggctttcctggaaccccaggaaggccaggcctgccaggagag
aagggtgctgtgggccagcagggaattggatttccagggccccctggccccaaaggtgtt
gacggcttacctggagatgtggggcctccagggactccaggtcgcccgggatttaatggc
ttacctgggaacccaggtgtgcagggccagaagggagagcctggagttggtctgccagga
ctcaaaggtttgccaggtctacccggcattgctggcacacccggggagaaggggagcgtt
ggggtaccaggcgttcctggagaacacggagcgatcggaccccctgggcttcaggggatc
agaggtgaaccggggcctcctggattgccaggctccgtggggtctccaggagttccagga
attggcccccctggagctaggggcccccctggaggacagggaccaccgggattgtcgggc
cctcctggaataaaaggagagaagggtttccccggattccccggactggacatgccaggc
cctaaaggagataaagggtctcaaggacttcctggcgtaacaggacagtcagggctccct
ggccttcctggacagcaggggtctcctggcattcctgggtttccaggttccaagggagaa
atgggcgtcatggggacccccgggcagccgggctcaccaggaccagtgggtgttccggga
ttaccgggtgaaaaaggggaccatggctttccgggctcctcaggacccaggggagaccct
ggcctgaaaggtgataagggggatgtcggtctccctggcaagcctggctccatggataag
gtggacatgggcagcatgaagggccagaagggagaccaaggagagaaaggacaaattgga
ccaattggtgagaaaggatcccgaggagaccctgggaccccaggagtgcctggaaaggat
gggcaggcaggacagcctgggcagccaggaccgaaaggtgatccaggtataagtggaacc
ccaggtgctccaggacttccgggaccaaaaggatctgttggtggaatgggcttgccagga
acacctggagagaaaggtgtgcctggcatccctggcccacaaggttcacctggctcacct
ggagaaaaaggtgcaaaaggagcgaaagggcaggcaggcccacctggcataggcatccca
gggctgcctggtgaaaagggagatcaagggatagcgggtttcccaggaagccctggagag
aagggagaaaaaggaagcattgggatcccaggaatgccagggtccccaggccttaaaggg
tctcctgggagtgttggctatccagggagccctgggctgcctggagaaaaaggtgacaaa
ggcctcccaggattggatggcatccctggtgtcaaaggagaagcaggtcttcctgggacg
cctggccccacaggcccagctggccagaaaggggagccaggcagtgacggaatcccgggg
tcagcaggagagaagggtgaaccaggtctaccaggaagaggattcccagggtttccaggg
gccaaaggagacaaaggttcaaagggcgaggtgggtttcccaggattagccgggagccca
ggaattcctggatccaaaggagagcaaggattcatgggtcctccagggccccagggacaa
ccagggttaccaggatccccaggccgtgccacggaggggcccaaaggagaccgtggacct
cagggccagcctggcctgccaggacttccgggacccatggggcctccggggcttcctggg
attgatggagttaaaggtgacaaaggaaatccaggctggccaggagcacccggtgtccca
gggcccaagggagaccctggattccagggcatgcctggtattggtggctctccaggaatc
acaggctctaagggtgatatggggcctccaggagttccaggatttcaaggtccaaaaggt
cttcctggcctccagggaattaaaggtgatcaaggcgatcaaggtgtcccgggagctaaa
ggtctcccgggtcctcctggccccccaggtccttacgacatcatcaaaggggagcccggg
ctccctggtcctgagggtcccccagggctgaaagggcttcagggacctccaggccccaaa
ggccagcaaggtgttacaggattggtgggtatccctggacctccaggtatccctgggttc
gacggtgcccctggccagaaaggagagatgggacctaccgggcctactggtccaagagga
tttccaggtccaccaggccctgatgggttgccagggtccatggggcccccaggcacccca
tctgttgatcatggcttccttgtgaccaggcacagtcaaacaatagacgacccacagtgt
ccctctgggaccaaaattctttaccatgggtactctttgctctacgtgcaaggcaacgaa
cgggcccatggccaggacttgggcacggccggcagctgcctgcgcaagttcagcacaatg
cccttcctgttctgcaatattaacaacgtgtgcaactttgcatcacgaaatgactactcg
tactggctctccacccccgagcccatgcccatgtcaatggcacccatcacgggggacaac
ataagaccatttattagtaggtgtgctgtgtgtgaggcgcccgccatggtgatggccgtg
cacagtcagaccattcagatcccaccgtgccccagcgggtggtcctcgctgtggatcggc
tactcttttgtgatgcacaccagcgctggtgcagaaggctctggccaagccctggcatcc
cctggctcctgtctggaggagtttagaagtgcgccattcatcgagtgtcacggccgtggg
acctgtaattactatgcaaatgcttacagcttttggctcgccaccatagagaggagcgag
atgttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacacatgtcagc
cgctgccaagtctgtatgagaagaacataa

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