Rhinopithecus roxellana (golden snub-nosed monkey): 104679484
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Entry
104679484 CDS
T03989
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104679484 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rro03019
]
104679484 (XAB2)
03041 Spliceosome [BR:
rro03041
]
104679484 (XAB2)
Messenger RNA biogenesis [BR:
rro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104679484 (XAB2)
Spliceosome [BR:
rro03041
]
Complex B
Other components
Prp19-related factors
104679484 (XAB2)
Complex C
104679484 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
104679484
NCBI-ProteinID:
XP_010383377
UniProt:
A0A2K6R128
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Position
8:complement(8691216..8701592)
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AA seq
855 aa
AA seq
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MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgactctcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccctatgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacatcgagttcaaacagggcgccccaaagcccaggctcaatcagctatatgagcgggca
ctcaagctgctaccttgcagctacaaactctggtaccgatacctgaaggcacgtcgggca
caggtgaagcatcgctgtgtgaccgaccccgcctacgaagatgtcaacaactgtcacgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattactgccagttcctc
atggaccaggggcgcgtcacacacacccgccgcaccttcgaccgtgccctccgggcactg
cccatcacgcagcactctcgaatttggcccctgtatctgcgcttcctgcgctcacaccca
ctgccggagacagctgtgcgaggctatcggcgcttcctcaagctgagtcccgagagtgca
gaggagtacattgagtacctcaagtcaagtgaccggctggatgaggccgcacagcgcctg
gccactgtggtgaacgacgagcgttttgtgtctaaggccggcaagtccaactaccagcta
tggcacgagctgtgcgacctcatctcccagaacccggacaaggtacagtccctcaatgtg
gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgt
tcgctcgccgactactacatccgcagcggccacttcgagaaggctcgggatgtgtacgag
gaggccatccggacggtgatgaccgtgcgggacttcacacaggtgtttgacagctatgcc
cagttcgaggagagcatgatcgctgcaaagatggagaccgcctcagagctggggcgcgag
gaggaggatgatgtggacctggagctgcgcctggcccgcttcgagcagctcatcagccga
cggcccctgctgctcaacagcgtcttgctgcgccaaaacccacaccacgtgcacgagtgg
cacaagcgtgtcgccctgcaccagggccgcccccgggagatcatcaacacctacacagag
gctgtgcagacagtggaccccttcaaggccacaggcaagccccacactctgtgggtggcg
tttgccaagttttatgaggacaacgggcagctggacgatgcccgtgtcatcctggagaag
gccaccaaggtgaacttcaagcaggtggatgacctggcaagcgtgtggtgtcagtgcggg
gagttggagctccgacacgagaactacgatgaggccttgcggctgctgcgaaaggccacg
gcgctgcctgcccgccgggccgagtactttgatggctccgagcccgtgcagaaccgcgtg
tacaagtcgctgaaggtctggtccatgctcgccgacctggaggagagcctcggcaccttc
cagtccaccaaagccgtgtatgaccgcatcctagacctgcgcatcgcgacaccccagatt
gtcatcaactatgccatgttcctggaggagcacaagtactttgaggagagcttcaaggcg
tacgagcgcggcatctcgctgttcaagtggcccaacgtgtccgacatctggagcacctac
ctgaccaaattcattgcccgctatgggggccgcaagctggagcgggcgcgagacctgttt
gaacaggctctggatggctgtcccccaaaatatgccaagaccttatacctgctgtacgca
cagctggaggaggagtggggcctggcccggcatgccatggccgtgtacgagcgtgccacc
agggccgtggagcccgcccagcagtatgacatgttcaacatctacatcaagcgggcggcc
gagatctatggggtcacgcacacccgtggcatctaccagaaggccattgaggtgctgtcg
gacgagcatgcgcgtgagatgtgcctgcggtttgcagacatggagtgcaagctcggggag
atcgaccgtgccagggccatctacagcttctgctcccagatctgtgacccccggacgacc
ggcgcattctggcagacgtggaaggacttcgaggtccggcatggcaacgaggacaccatc
aaggagatgctgcgcatccggcgcagcgtgcaggccacgtacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtctcgggcagtgccacaggcaccgtgtctgacctggct
cccgggcagagcggcatggacgacatgaagctgctggaacagcgggcagagcagctggcg
gctgaggcggagcgtgaccagcccccgcgtgcccagagcaagatcctgttcgtgaggagt
gacgcctcccgggaggagctggcggagctggcacagcaggtcaaccctgaggagatccaa
ctgggcgaggacgaggacgaggatgagatggacctggagcccaacgaggttcggctggag
cagcagagcgtgccagccgccgtgtttgggagcctgaaggaagactga
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