Rhinopithecus roxellana (golden snub-nosed monkey): 104680142
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Entry
104680142 CDS
T03989
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rro04121
]
104680142 (PDZRN3)
Enzymes [BR:
rro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104680142 (PDZRN3)
Ubiquitin system [BR:
rro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
104680142 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-TRAF
Sina_ZnF
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104680142
NCBI-ProteinID:
XP_030775907
LinkDB
All DBs
Position
1:complement(64110061..64351457)
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AA seq
1066 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAYAARGCGRVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPSVDNHDGSSSEGIFVSKIVDTGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSSPSPPVLDPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSNPL
AGQRKLTCSQDTLGSGDLPFSNESFISADCTDADYLGIPVDECERFRELLELKCQVKSAT
PYGLYYPSGPLDAGKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQYRESWM
LHNSGFRNYNTSIDVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLEISPDNSLR
RAAEGISCPSSEGAVATTEAYGPAPKNLLSITEDPEVGTPTYSPSLKELDPSQPLESKER
RASDGSRSPTPSQKLGSAYLPSYHHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLSSPTPSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTD
DDAVSEMKMGRYWSKEERKQHLVKAKEQRRRREFMMQSRLDCLKEQQAADDRKEMNILEL
SHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacttgaagtgcgcgctg
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaagagctcaaccacgtcctaccgctcaagcgccttatcctcaagctggacatc
aagtgcgcctacgcggcgcgcggctgcggccgggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcggccaagtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccttgacgcacggcgagcagcgcgcgggcggccac
tgctgcgcgcgagcgctgcgggcgcacaacggcgcgctgcaggcccgcttgggcgctctg
cacaaggcgctcaagaaggaggcgctgcgggctgggaagcgcgagaagtcgctggtggcc
cagctggccgcggcgcagttagagctgcagatgaccgcgctgcgctaccagaagaaattc
accgaatacagcgcgcgcctcgactcgctcagccgctgcgtagccgcgccgcccggtggc
aagggcgaagaaaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggccgagtgtggataaccacgatggatcatccagtgaagga
atctttgtatccaagatagttgacactgggcccgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttgtccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatagtggtgcaggtgttgagaagaacacca
aggaccaaaatgtttacacctccgtcagagtcgcagctggtggacacgggaacccaaacc
gacatcacctttgaacatatcatggccctcactaagatgtcctctcccagcccgcccgtg
ctggatccctatctcttgccagaggagcatccctcagcccatgaatactacgatccaaat
gactacattggagacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacagaatgaacagccaggacaagctgggcctcactgtgtgctaccggacggac
gatgaagatgacattgggatttatatcagtgagattgaccctaacagcattgcagccaag
gatgggcgcatccgagaaggagaccgcattatccagatcaatgggatagaggtgcagaac
cgagaggaggctgtggctcttctaaccagtgaagaaaataaaaacttttcattgctgatt
gcaaggcctgaactccagctggatgagggctggatggacgatgacaggaacgactttctg
gatgacctgcacatggacatgctggaggagcagcaccaccaggccatgcaattcacagct
agtgtgcttcagcagaagaagcacgaggaagacggtgggaccacagatacagccaccatc
ttgtccaaccagcacgagaaggacagcggtgtggggcggactgacgagagcacccgcaat
gacgagagctcggagcaagagaacaacggcgacgatgccaccgcatcctccaacccgctg
gcggggcagaggaagctcacctgcagccaggacaccttgggcagcggcgacctacccttc
agcaacgagtccttcatctcggccgactgcacggacgccgactacctggggatcccggtg
gacgagtgcgagcgcttccgcgagctactggagctcaagtgccaggtgaagagcgccact
ccttatggcttgtactatcctagtggccccctggacgccggcaagagcgaccccgagagc
gtggacaaggagctggagctgctgaatgaggagctgcgcagcatcgagctggagtgccta
agcatcgtgcgcgcccacaagatgcagcagctcaaggagcagtaccgcgagtcttggatg
ctacataacagcggcttccgcaactacaacaccagcattgacgtgcgcaggcacgagctc
tcggacatcaccgagctcccggagaaatccgacaaggacagctcgagcgcctacaacacg
ggcgagagctgccgcagtaccccgctcaccctggagatctcccctgacaactccttgagg
agagcagcggagggcatcagctgcccgagcagcgaaggggctgtggcgaccacggaagcc
tatgggccagccccaaagaatctgctctccatcacggaagatcccgaagtgggcacccct
acctatagcccgtccctgaaagagctggaccccagccagcccctggaaagcaaagagcgg
agagccagcgacgggagccggagccccacgcccagccagaagctgggcagcgcctacctg
ccctcctaccaccactccccatacaagcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagtatgtgcaaggacctgagctcccccaccccgtcggagccgcgcatggag
tggaaggtgaagattcgcagcgacgggacgcgctacatcaccaagaggcccgtgcgggac
cgcctgctgcgggagcgcgccctgaagatccgggaagagcgcagcggcatgaccaccgac
gacgacgcggtgagtgagatgaagatggggcgctactggagcaaggaggagaggaagcag
cacttggtgaaggccaaggagcagcggcggcggcgcgagttcatgatgcagagcaggttg
gattgtctcaaggagcagcaagcagccgatgacaggaaggagatgaacatcctcgaacta
agccacaaaaagatgatgaagaagaggaataaaaaaatcttcgataactggatgacgatc
caggaactcttaacccacggcacaaaatccccggacggcactagagtatacaattccttc
ctatcggtgactactgtataa
DBGET
integrated database retrieval system
