Rhinopithecus roxellana (golden snub-nosed monkey): 104682246
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Entry
104682246 CDS
T03989
Symbol
VPS4B
Name
(RefSeq) vacuolar protein sorting-associated protein 4B isoform X1
KO
K12196
vacuolar protein-sorting-associated protein 4
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro03250
Viral life cycle - HIV-1
rro03272
Virion - Hepatitis viruses
rro04144
Endocytosis
rro04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
104682246 (VPS4B)
03272 Virion - Hepatitis viruses
104682246 (VPS4B)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104682246 (VPS4B)
09143 Cell growth and death
04217 Necroptosis
104682246 (VPS4B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rro04131
]
104682246 (VPS4B)
03400 DNA repair and recombination proteins [BR:
rro03400
]
104682246 (VPS4B)
Membrane trafficking [BR:
rro04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-III complex
104682246 (VPS4B)
DNA repair and recombination proteins [BR:
rro03400
]
Eukaryotic type
Check point factors
Other check point factors
104682246 (VPS4B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Vps4_C
MIT
AAA_lid_3
AAA_16
TIP49
AAA_14
RuvB_N
AAA_5
AAA_22
IstB_IS21
AAA_25
DUF815
AAA_18
AAA_2
AAA_17
nSTAND3
RNA_helicase
AAA_24
NPHP3_N
AAA_33
PhoH
AAA_7
Mg_chelatase
ResIII
AAA_28
Parvo_NS1
Csx12
NACHT
KAP_NTPase
TPR_1
bpMoxR
ABC_tran
MCM
Motif
Other DBs
NCBI-GeneID:
104682246
NCBI-ProteinID:
XP_010387104
UniProt:
A0A2K6QXL2
LinkDB
All DBs
Position
21:complement(22869971..22904347)
Genome browser
AA seq
444 aa
AA seq
DB search
MSSTSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRA
KCTEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQL
QGAIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGK
SYLAKAVATEANNSTFFSISSSDLVSKWLGESEKLVKNLFQLARENKPSIIFIDEIDSLC
GSRSENESEAARRIKTEFLVQMQGVGVDNDGILVLGATNIPWVLDSAIRRRFEKRIYIPL
PEPHARAAMFKLHLGTTQNSLTEADFRELGKKTDGYSGADISIIVRDALMQPVRKVQSAT
HFKKVRGPSRADPNHLVDDLLTPCSPGDPGAIEMTWMDVPGDKLLEPVVSMSDMLRSLSN
TKPTVNEHDLLKLKKFTEDFGQEG
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccacttcgcccaacctccagaaagcgatagatctggctagcaaagcagcgcaa
gaagacaaggctgggaactacgaagaagcccttcagctctaccagcatgctgtgcagtat
tttcttcatgtcgtgaaatatgaagcacagggtgataaagccaagcaaagtatcagggca
aagtgtacagaatatcttgatagagcagaaaaactaaaggagtacctgaaaaataaagag
aaaaaagcacagaagccagtgaaagaaggacagccgagtccagcagatgagaaggggaat
gacagtgatggggaaggagaatctgatgatcctgaaaaaaagaaactacagaatcaactt
caaggtgctattgttatagaacgaccaaatgtgaaatggagtgatgttgctggacttgaa
ggagccaaagaagcactgaaagaggctgtgatactgcctattaaatttcctcatcttttt
acagggaagagaacaccttggaggggaatcctattatttgggccgcctggaacaggaaag
tcctacttagccaaagctgtagcaacagaagccaacaactcaacatttttttcaatatct
tcctctgatcttgtttctaagtggctaggtgaaagtgaaaaactggttaagaatttattc
caacttgccagagagaacaagccttccattatcttcattgatgaaattgattctctgtgt
ggttcaagaagtgaaaacgaaagtgaagccgcacgtagaattaagacggagttcctagtg
caaatgcaaggggttggtgtagacaatgatggaattttggttctgggagctacaaatata
ccctgggttctggattctgccattaggcgaagatttgagaaacgaatttatattcctttg
ccggaaccccatgcccgagcagcaatgtttaaactgcacctggggaccactcagaacagt
cttacagaagcagactttcgggaacttgggaagaaaacagatggttattcaggggcagat
ataagtatcattgtacgtgatgcacttatgcagcctgttaggaaagtacagtcagctact
cattttaaaaaggttcgcggaccttcccgagctgatcctaaccatcttgtagatgatctg
ctaacaccttgctctccaggtgaccctggtgccattgaaatgacatggatggatgtccct
ggagataaacttttggagccagttgtttccatgtcagatatgttgcggtcactatctaac
acaaaacctacagtcaatgaacatgacttgttgaaattaaagaagtttacagaagatttt
ggtcaagaaggctaa
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