Rhinopithecus roxellana (golden snub-nosed monkey): 115897667
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Entry
115897667 CDS
T03989
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
rro
Rhinopithecus roxellana (golden snub-nosed monkey)
Pathway
rro04140
Autophagy - animal
rro04148
Efferocytosis
rro05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
rro00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115897667 (VPS18)
04148 Efferocytosis
115897667 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115897667 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rro04131
]
115897667 (VPS18)
Membrane trafficking [BR:
rro04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
115897667 (VPS18)
Hops complex
115897667 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
Vps39_2
zf-C3HC4_2
zf-RING_16
KNOX2
zf-RING_2
zf-ANAPC11
zf-RING_UBOX
zf-rbx1
zf-C3HC4
CNH
Motif
Other DBs
NCBI-GeneID:
115897667
NCBI-ProteinID:
XP_030787150
LinkDB
All DBs
Position
5:complement(122017672..122027291)
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AA seq
973 aa
AA seq
DB search
MASILDEYENSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSSNQLCMSLGKDTLLRIDLGKASEPNHVELGRKDDAKVHKMFLDHTGSHLLIALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGHIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEGGPAPVCSLEAERGPDGRSFVIATTRQRLFQFIGRAAEGAE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPKLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVLRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQRRYLESARCYALTQSYFEEIALKFLEARQEEALAEFLQRKLASL
KAAERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETKECFRTFLSSPRHKEWLFASR
ASIHELLASHGDTEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLARHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEVQQVSQAIRYMEFCVNVLGETE
QAIHNYLLSLYARGRPDSLLAYLEQAGASPHRVHYDLKYALRLCAEHGHHRACVHVYKVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICSSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCATCDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAPPPAKGSARAKEAEGGAATAGPSREQLKADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEQLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggatgagtacgagaactcgctgtcccgctcggccgtcttgcagccc
ggctgccctagcgtgggcatcccccactcggggtatgtgaatgcccagctggagaaggaa
gtgcccatcttcacaaagcagcgcattgacttcaccccttccgagcgcatcaccagtctt
gtcgtctccagcaatcagctctgcatgagcctgggcaaggatacactgctccgcattgac
ttgggtaaggcaagtgagcccaaccacgtggagctgggacgtaaggatgacgcaaaagtt
cacaagatgttccttgaccatacgggctctcacttgctgattgccctgagcagcacggag
gtcctctacgtgaaccgaaacggacagaaggtacggccactagcacgctggaaggggcag
ctggtggagagtgtgggttggaacaaggcactgggcaccgagagcagcacaggccccatc
ctggtcgggactgcccaaggccacatcttcgaagcagagctctcagccagcgaaggtggg
cttttcggccctgctccggatctctacttccgcccgttgtacgtgctcaatgaagaaggg
ggtccagcacctgtgtgctcccttgaggccgagcggggccctgatgggcgtagcttcgtt
attgccaccactcggcagcgcctcttccagttcataggccgagcagcagagggggctgag
gcccagggtttctcagggctctttgcagcttacacggaccatccacccccattccgtgag
tttcccagcaacctgggctacagtgagctggccttctacactcccaagctgcgctccgca
ccccgggcctttgcctggatgatgggggatggtgtgttatatggggcattggactgtgga
cgccctgactctctgctgagcgaggagcgagtctgggagtacccagagggggtagggcct
ggggccagcccacccctagccatcgtcttgacccagttccacttcctgctgctgctggca
gaccgggtggaggcagtgtgcacactgactgggcaggtggtgctgcgggatcacttcctg
gagaaatttgggccactgaagcacatggtgaaggactcctccacaggccagctgtgggcc
tacactgagcgggctgtcttccgctaccatgtgcaacgggaggcccgagatgtctggcgc
acctatctggacatgaaccgctttgatctggccaaagagtattgccgagagcggcctgac
tgcctggacacggtcctggcccgggaggccgatttctgctttcgccagcgtcgctacctg
gagagcgcacgctgctatgccctgacccagagctactttgaggagattgccctcaagttc
ctggaagcccgacaggaggaggctctggctgagttcctgcagcgaaaactggccagtttg
aaggcagccgagcgtacccaggccacactgctgaccacctggctgacagagctctacctg
agccggcttggggctctacagggcgacccagaggccctgaccctctaccgagaaaccaag
gaatgctttcgtaccttcctcagcagcccccgccacaaagagtggctctttgccagccgg
gcctctatccatgagctgctcgccagtcatggggacacagagcacatggtatactttgca
gtgatcatgcaggactatgagcgggtggtagcttaccactgtcagcacgaggcctatgag
gaggccctggctgtgctcgcccgccaccgcgacccccagctcttctacaagttctcaccc
atcctcatccgtcacatcccccgccagcttgtagatgcctggattgagctgggcagccgg
ctggatgctcggcagctcatccctgccctggtgaactacagtcagggtggtgaggtccag
caggtgagccaggcaatccgctacatggagttctgcgtgaacgtgctgggggagactgag
caggccatacacaactacctgctgtcgctgtatgcccgtggccggccggactcactgctg
gcttatctcgagcaggctggggccagcccacaccgggtgcattacgacctcaagtatgcg
ctgcggctctgtgctgagcatggccaccaccgcgcttgtgtccacgtctacaaggtcctg
gagctgtatgaggaggccgtggacctggccctgcaggtggacgtggacctggccaagcag
tgtgcagacctgcccgaggaggatgaggaattgcgcaagaagctgtggctgaagatcgca
cggcacgtggtgcaggaggaggaagatgtgcagacagccatggcttgcctggctagctgc
cccttgctcaagattgaggatgtgctgcccttctttcctgatttcgtcaccatcgaccac
ttcaaggaggcgatctgcagctcacttaaggcctacaaccaccacatccaggagctgcag
cgggagatggaagaggctacagccagtgcccagcgcatccggcgagacctgcaggagctg
cggggccgttacggcactgtggagccccaggacaaatgtgccacctgcgacttccccctg
ctcaaccgccctttttacctcttcctctgtggccatatgttccatgctgactgcctgctg
caggccgtgcgacctggcctgccagcctacaagcaggcccggctggaggagctgcagagg
aagctgggggctgctccacccccagccaagggctctgcccgggccaaggaggccgagggt
ggggctgccactgcaggccccagccgggaacagctcaaggctgacctggatgagttggtg
gccgctgagtgtgtgtactgtggggagttgatgatccgctctattgaccggccgttcatc
gacccccagcgctatgaggaggagcagctcagttggctgtag
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