Rhizobium rosettiformans: D4A92_03790
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Entry
D4A92_03790 CDS
T08393
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03030
DNA replication
rros03430
Mismatch repair
rros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D4A92_03790
03430 Mismatch repair
D4A92_03790
03440 Homologous recombination
D4A92_03790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rros03032
]
D4A92_03790
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_03790
Enzymes [BR:
rros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D4A92_03790
DNA replication proteins [BR:
rros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
D4A92_03790
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
D4A92_03790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Malic_M
Motif
Other DBs
NCBI-ProteinID:
QRF50629
UniProt:
A0ABX7ERF5
LinkDB
All DBs
Position
complement(791829..793898)
Genome browser
AA seq
689 aa
AA seq
DB search
MTRISLRGRILLFFVALAAGAVAALAVGLWFGYHREGSPDMLNAFMQSAIAAGFLILALI
TWVWFLFDTHLARPIDKVASAMRARAHADVGNDFQAEEARYLGDLADAASATAATLAQTR
GALAEQVQRETTRLSSDKNKLEQLLADVPPAVLLCTGRHHLVFYNGVAQQMLAGSQRPVC
LDRNIFDYLSEGPIRDAHHRLLESSDPDAVVEFICLSPCGRRRLAGRMRLASDNGGDQAA
YVMTLRDVTTEVAAYARRDALLGDVFLQVRPIVSDLRHALVSHGPGTGADAPVSTQLQAL
DATLADLEARFESCRSAGWPMAPTDVRELAGQLRRDLEGQKLTLDAEVAEIAVRCNAFDI
VSLLGHLVSRVSTATAAAHFHLTISEAQGAADLTLFWKGGAVSPESVDHWLDEPVFDGGV
TCETILKTHGIVLVVGADDDAPSISTRLRPIERLRPVGADMSRHVVYDFDLLSRLHYEKL
SDARLDSLTYVVFDTETTGLLPEQGDEIVQIAAVRIVNGKRVKNEVFDLLVNPGRPIPPS
SSAIHGVTDAMVADAVSVQEAVRQFHRFAEGAVLVAHNAPFDMEFLTRREKEVGLRFMNP
ILDTVLVSAAAFGRAETHTLDALADRLGVHIDEKDRHTALGDAIATADVFIKLKDMLAGR
GLVRFGEVLTELRGHQRLVRDLNDQARVS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaccaggatcagcctgcgcggacgtatcctgcttttcttcgtggcgctggcggctggt
gcggtcgcggctttggctgtcggtttgtggttcggctaccaccgcgagggcagcccggac
atgctgaatgcgttcatgcagagcgctatcgccgccggctttctgatcctcgctctaatc
acctgggtctggtttctcttcgacacgcatctcgcccgtcccatcgacaaggtggcatcg
gccatgcgtgcccgggcgcatgccgatgtgggcaacgactttcaggcagaggaagcgcgc
tatctcggtgatcttgccgatgcagcctccgcaaccgcagcgacccttgcgcagacgcgg
ggcgcgctcgcggaacaggtgcagcgcgaaaccacgcgtctgtcgtccgacaagaacaag
ctcgaacagctgctcgccgacgtgccgcctgccgttcttctctgtacgggccgacatcat
ctcgtcttctacaacggagtggcgcaacagatgcttgcgggctcgcagcgccctgtttgc
ctcgatcgcaacatcttcgactatctgagtgaagggccgatccgcgacgcgcatcaccgg
cttctggagagctcggatccagatgcggtggtcgagttcatctgtctcagcccctgcggt
cggcgcaggctcgccggacgcatgaggctcgccagtgacaacggcggcgatcaggcggcc
tatgtcatgacccttcgcgatgtgacgaccgaagttgcggcctatgcccggcgtgacgct
cttctcggtgacgtgttcctgcaggtccggcccatcgtctcggatctgcgccatgcgctt
gtctcgcatggccccggcacgggagccgatgcccctgtttcaacgcagcttcaggcgctg
gatgcgacgctcgcggatctcgaagcccgctttgaaagctgtcggtccgctggttggccg
atggcgccgacggatgtgcgtgagcttgctggccaactccgtcgcgacctcgagggccag
aaactcacgctcgacgccgaggtcgccgaaatcgctgtccgctgcaatgccttcgatatc
gtcagtctcctcggacacctcgtgtcccgggtcagcacggcgactgctgctgcgcatttt
catctcacaatcagcgaagcccagggcgctgccgacctgaccttgttctggaagggcggc
gccgtgtcgcccgaaagcgtggatcactggctggacgagccggtctttgacggcggtgtg
acttgcgagacgatcctcaagacccacggcatcgttctggtcgtcggggcggatgatgat
gcaccgtcgatctcgacccggctgcggccaatcgagcggctgcgaccggtcggagcggac
atgtcgcggcatgtcgtctacgatttcgatctgctgtcgcgcctgcactacgagaagctc
tccgacgcgcgtctcgatagcctgacctatgtggtgttcgatacggaaacgacgggcttg
ctgccggaacagggcgatgaaatcgtccagatcgcggctgtccgcatcgtcaatggaaag
cgcgtcaagaacgaggtgttcgacttgctcgtcaatccggggcggccgatacctccgtcc
tcatccgcaatccatggcgtgacggacgcgatggtcgcagatgccgtaagcgttcaggag
gccgtgcggcagtttcaccgctttgcggaaggggctgtgctcgtggcacacaatgcgccg
ttcgacatggagtttctcacgcgacgggagaaggaagtcgggctgcgcttcatgaacccg
atcctggatacggtgctggtgtcagccgccgccttcggccgcgccgaaacacatacgctc
gatgcgctcgccgacaggctcggtgtgcatatcgacgagaaagatcgccacactgcgctc
ggcgatgcgattgcgactgctgacgttttcatcaagctgaaggacatgctggccgggcgc
ggcctggtacggttcggtgaagtgctgaccgaattgcgtggtcatcaaaggctcgttcga
gatctcaacgatcaggcccgcgtatcctga
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