Rhizobium rosettiformans: D4A92_06115
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Entry
D4A92_06115 CDS
T08393
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
rros
Rhizobium rosettiformans
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_06115 (addB)
Enzymes [BR:
rros01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
D4A92_06115 (addB)
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
D4A92_06115 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
QRF51049
LinkDB
All DBs
Position
complement(1288249..1291437)
Genome browser
AA seq
1062 aa
AA seq
DB search
MVSKAPRLLTIPPGRPFLRTLTEALLDGRLIDGFRYDPSDPLTLAGVTLLVPTRRAARVL
RSEFVDLLGGRAAILPDIRTLGETDDDSGFFDLDAPQLMDLAPPVSGTVMLLELTRLILA
WRNQLPEIVRSIHSDTPLVAPASPADAVWLARALVELIEAAETEGCDWKDLEKLQSADFG
SWWQLTLEFLKIATLFWPARLQELVRSSPARHRDAVLRAEAERFRRQGASGPVIVAGSTG
SIPAAAELIAAIAELDQGVVVLPGLDLDMPDEDWAKLNDREISVVRPSPAVRGHPQYGLA
HLLRHMKFERADVRVLETSDPALQDRAEFLSRAMAPAEATDTWKAWRQDIDDSRVLAAFR
DVSLIETANEREEATAIAIALRLGLEEASDNPESRVALITPDRALARRVMSELARFGIEA
DDSAGTPMTGTQAAMLTQVVVEACLRPGDPVAIVSLIKHPLARFGFTAEDMRKAADALER
IALRGGLKSLDLAEMEPLFAEGLEAHLADRHKPQWRISIAAEEIELARLLASRVTKAVEP
LVSSVIRSTDGRVLSQTLTVSDWAERTGRVLEAVTVDERGDLAGLWGDAAGEALARLLAE
VLETDGQIEADGAQWVDILTALMAGQAVKPRAMRHPRVFIFGTLEARLQNVDMMVIGGMN
EGSWPGQTKNNPFLSRVMKTEVGLEPPERQIGQVAHDFQMACGTRKLIFSRSLRQGSAPT
VASRWLQRLMALGGTLLEDEMRKRGQIYRRYADLIDQGENQAPAQRPAPRPRVELQPRSF
SFSEVGRFRRDPYSIYARRILRLDPVDPFNQDPGAAERGTLYHRIVERFIREDHDPARLD
ALDILHRITDEEFLEEALPLHIDIVWRQRFYSVASAFLDWERQRRPEIKRSLTEVRGNVL
LRPVDITISGIADRIDIRGGGFADIIDYKTGLNPSANQARSLLDPQLALEAAALLQGAFK
PAGDMKPLNLVYVRLRPGDRFSADQVNNEMATRGDSKKSALELATQSVDELGRFVQALQS
GERGYVSRLIPAEQNAYGGEYDHLARVAEWSTAEAEEGAGDE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggtgagcaaggcgccgcgtctgctgacgatccctccgggccggccctttctcaggacg
ctgacggaagcgctgctcgacggccgtctgatcgacggttttcgctatgacccctccgat
ccgcttacgctggccggcgtcactctgctggttccgacccggcgcgcagcccgcgtgttg
cggtcggagttcgtcgacctgcttggtggtcgcgcggcgatccttcccgatattcgcacg
ctgggtgaaacggacgacgacagcggcttcttcgatctcgatgcaccgcagctgatggat
cttgccccgccggtgagcggcacagtcatgcttctggaactcacccggctgatcctcgcc
tggcgcaaccagttgccggagatcgtccggtcgatccattcggatacgccgctggttgca
cccgcgagcccggcggatgccgtctggcttgctcgggcgctggtcgaactgatcgaagcg
gccgagacggaaggctgcgactggaaggatctcgaaaagctgcaatcagcggatttcggc
tcctggtggcagctgacgctggagtttctgaaaattgcgaccctgttctggccggcgcgg
ctgcaggaactggtgcggtcatcaccggcccgtcaccgcgacgccgtgctccgggccgag
gcggagcgattccgcagacagggtgcttccggtcccgtcatcgttgcgggctccaccggc
tctatcccggcagcagccgaactgattgccgcgattgccgagctcgaccagggtgtcgtg
gtgctgcccgggcttgatctggacatgccggatgaggactgggcgaaactcaacgaccgc
gagatctcggtggtccgtccgagccctgcggtgcgcggacatccgcaatacggtctggcg
catctcttgcggcatatgaaattcgaacgtgctgacgtgcgggttctcgaaacctccgat
ccggcgcttcaggatcgggccgagtttctgtcgcgtgccatggcacccgccgaggcgacc
gatacctggaaggcctggcggcaggacattgacgattcccgcgtactcgcggcatttcgc
gatgtctcgctgatcgagacggcgaacgagcgtgaagaagccacagccattgcgattgcg
cttcgactggggctcgaagaggcttccgacaatcccgaaagccgggtggcgctgatcacg
ccggatcgcgcgctggcgcggcgtgtgatgtccgaactcgcgcggttcgggatcgaggcg
gatgattcggcgggtacgccgatgaccggaacccaggctgccatgctgacccaggtggtg
gtcgaggcctgcctgcgtccgggtgatccggtggcgatcgtctcgctcatcaagcatcct
ctggcacggttcggcttcacggccgaagacatgcgcaaggctgccgatgccctggaacgg
atcgccctgcgtggaggtctgaaaagcctcgatcttgccgagatggaaccgctctttgcc
gaagggctcgaagcgcatctggccgaccgccataagccacaatggcgcatctcgattgcg
gccgaggagatcgagcttgctcgtcttttggccagccgggtaaccaaggcggtcgaaccc
ctcgtctcgtcggtcatccggtcaactgacgggcgtgtgctgtcgcagacattgaccgtc
agtgactgggccgagcgcacgggccgcgttctggaagccgtgacggtcgacgagcgcggt
gatctggccggtctctggggcgatgcggcaggcgaggctctggcgcggcttctcgccgaa
gttctggagacggatgggcagatcgaggcggacggtgcgcaatgggtggatatcctgacc
gcgctgatggccggccaggcggtcaagccacgcgccatgcggcatccgcgcgtcttcatc
ttcggcacgctcgaagcgcgcctgcagaatgttgacatgatggtgatcgggggcatgaac
gaggggagctggcctggtcagaccaagaacaatcccttcctctcgcgtgtcatgaagacg
gaagtggggcttgagccgccggaacggcagatcggccaggtggcgcatgacttccagatg
gcctgtggcacgcggaaactgattttttcgcgttcgctgcgccaggggtctgcgccgacg
gttgcctcgcgctggctccagcgtttgatggcgctcggcggcaccctgctggaagacgag
atgcgaaagcgcggccagatctaccggcgttacgccgatctcatcgaccagggcgagaac
caggctccggctcagcgccccgcaccgcgccctcgcgtcgaactgcagccgcgctccttc
agcttttcagaagtcggtcgcttccggcgggatccctattcgatctatgcgcggcgaatc
ctgcgtcttgatcccgtcgatcccttcaaccaggatccgggggctgccgaacgcgggacg
ctctatcaccggatcgtcgagcgcttcatccgcgaggaccatgatccggcccggctggac
gcgctcgatatcctgcaccggatcaccgacgaggagtttctggaagaagccctgccgctg
catatcgacatcgtctggcgccaacgcttctacagtgtcgcctcggcatttctcgattgg
gagcggcagcggaggccggagatcaagcgatcactgacggaagtcaggggcaatgtgctg
ctccggcccgtcgatatcaccatcagcgggatcgccgaccggatcgatatccgggggggc
ggattcgccgacatcatcgactacaagacggggctcaatccgagcgccaaccaggcgcgc
agcctgctcgacccgcaattggctctcgaagctgcagcccttctccaaggcgccttcaag
cccgccggagacatgaagccgctcaaccttgtctatgtccgtctgcgacccggcgatcgt
ttttcggccgaccaggtgaacaacgagatggcgacgcggggcgacagcaagaaatcggcc
ctcgagcttgcgacgcaatcggtcgacgaacttggccgtttcgtgcaggcgctgcagagc
ggcgagcggggttatgtctcccgcctcatcccggcggaacagaacgcctatggcggcgaa
tacgaccatctggcgcgtgttgcggagtggtcgacggcggaagccgaggaaggagccggc
gatgagtga
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