Rhizobium rosettiformans: D4A92_07115
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Entry
D4A92_07115 CDS
T08393
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
D4A92_07115 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rros03019
]
D4A92_07115 (pnp)
03016 Transfer RNA biogenesis [BR:
rros03016
]
D4A92_07115 (pnp)
Enzymes [BR:
rros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
D4A92_07115 (pnp)
Messenger RNA biogenesis [BR:
rros03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
D4A92_07115 (pnp)
Transfer RNA biogenesis [BR:
rros03016
]
Prokaryotic type
tRNA degradation factors
D4A92_07115 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QRF51224
UniProt:
A0ABX7ESB5
LinkDB
All DBs
Position
complement(1513305..1515446)
Genome browser
AA seq
713 aa
AA seq
DB search
MFDVHSVEIEWAGRPLKLETGKIARQADGAVLATYGETVVLATVVSAKSPKPGQDFFPLT
VNYQEKTYAAGKIPGGYFKREGRPSEKETLVSRLIDRPIRPLFPEGYKNDTQVVVTVVQH
DLENDPDVLAMVAASAALTLSGVPFMGPVGGARVGYINGEYVLNPHLDEMDESVLDLVVA
GTQDAVLMVESEAKELNEEIMLGAVMFGHKGFQPVIDAIIKLAEVAAKEPREFEPEDHSA
LEAEMLSIAETELRAAYKITQKADRYAAVDAVKAKVKAHFFPEGEEPKYTNEVIGAVFKH
LQAKIVRWNILDTKSRIDGRDLSTVRAIVSEVGILPRTHGSALFTRGETQAIVVATLGTG
EDEQYVDSLTGMYKERFLLHYNFPPYSVGETGRMGSPGRREIGHGKLAWRAIRPMLPSPE
QFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLAKPVAGIAMGLILEGERFAVLS
DILGDEDHLGDMDFKVAGTADGITSLQMDIKIAGITEEIMKVALGQAQGGRKHILNEMAN
ALSESRGQLGEFAPRIEVMNIPVDKIREVIGSGGKVIREIVEKTGAKINIEDDGTVKIAS
ASGKEIEAARKWIHSIVAEPEVGVIYEGTVVKTADFGAFVNFFGSRDGLVHISQLASERV
AKTSDVVKEGDKVWVKLMGFDERGKVRLSMKVVDQTTGQEIVAEKKNDGEAAE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgttcacagcgtcgaaatcgagtgggcaggccgcccgctgaagctcgagacc
ggcaagatcgcccgccaggctgacggtgccgttctcgccacttatggcgaaaccgtcgtt
ctcgccaccgtcgtttcggccaagtcgccgaagccgggccaggacttcttcccgcttacc
gtcaattaccaggaaaagacctatgccgccggcaagatcccgggtggctatttcaagcgc
gaaggtcgtccgtcggagaaggaaacgctggtttcccgcctgatcgaccgtccgatccgc
ccgctcttcccggaaggctacaagaacgacacccaggttgtcgtcaccgtggtccagcat
gacctcgaaaacgatccggacgttctggccatggttgccgcttcggcagccctcaccctc
tccggcgtacctttcatgggcccggttggcggcgctcgcgtcggctatatcaacggcgaa
tacgttctgaacccgcatctcgacgagatggacgagtcggttctcgacctcgtcgttgcc
ggcacgcaggacgccgtcctgatggttgagtcggaagccaaggaactcaacgaagagatc
atgctcggcgccgtcatgtttggccacaagggcttccagccggtcatcgacgcgatcatc
aagctcgctgaagtggctgccaaggagccgcgcgaattcgagccggaagatcattccgct
ctcgaagccgaaatgctgtcgatcgccgaaaccgagctgcgcgctgcctacaagatcacc
cagaaggctgatcgctatgcagccgtcgacgctgtcaaggccaaggtgaaggcacacttc
ttcccggaaggcgaagagccgaagtacaccaacgaagtcatcggtgccgtcttcaagcac
ctgcaggcgaagatcgttcgctggaacatcctcgacacgaagagccgcatcgacggccgc
gacctgtccaccgttcgtgcgatcgtgtcggaagtcggcatcctgccgcgcacgcacggt
tcggccctgttcacccgtggcgagacccaggcgatcgttgtcgccacgctcggcaccggc
gaagacgagcagtatgtcgactcgctcaccgggatgtacaaggaacgcttccttctgcat
tacaacttcccgccctactccgtcggtgaaaccggccgcatgggttcgccgggtcgtcgc
gaaatcggtcacggcaagctcgcatggcgcgctatccgcccgatgctgccgtcgcctgag
cagttcccctacacgctgcgcgtcgtctccgagatcaccgagtcgaacggctcgtcctct
atggcaaccgtttgcggcacctccctcgccctgatggacgccggcgttccgctcgccaag
ccggttgccggtatcgccatgggtctcatcctcgaaggtgagcgctttgcggttctctcc
gacatcctcggcgacgaagaccatctcggcgacatggacttcaaggttgcgggtactgcc
gacggcatcacctcgctgcagatggacatcaagatcgccggcatcaccgaagagatcatg
aaggtcgcactcggccaggcacagggtggccgcaagcacatcctgaacgaaatggcgaat
gccctttcggaaagccgtggccagctcggcgaattcgcaccgcgcatcgaagtgatgaac
atcccggtcgacaagatccgtgaagtcatcggctccggcggcaaggtcatccgcgaaatc
gtcgaaaagaccggcgccaagatcaacatcgaagacgacggcaccgtgaagattgcctcc
gcctccggcaaggaaatcgaagcggcccgcaagtggatccactcgatcgtggccgagccg
gaagtcggcgtgatctacgaaggtaccgttgtgaagaccgctgacttcggcgccttcgtc
aacttcttcggttcgcgtgacggcctcgttcacatctcgcagctggcttccgagcgtgtg
gccaagacctccgacgtcgtcaaggaaggcgacaaggtctgggtcaagctgatgggcttc
gatgagcgcggcaaggtccgcctgtcgatgaaggtcgttgatcagaccaccggccaggaa
atcgttgccgagaagaagaacgacggcgaagcagctgaataa
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