Rhizobium rosettiformans: D4A92_07125
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Entry
D4A92_07125 CDS
T08393
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rros
Rhizobium rosettiformans
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rros03016
]
D4A92_07125 (truB)
Enzymes [BR:
rros01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
D4A92_07125 (truB)
Transfer RNA biogenesis [BR:
rros03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
D4A92_07125 (truB)
Prokaryotic type
D4A92_07125 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QRF51226
LinkDB
All DBs
Position
complement(1516184..1517113)
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AA seq
309 aa
AA seq
DB search
MSKPRKPKGRPISGWLILDKPVDFGSTEAVGKIKWLFNAQKAGHAGTLDPLASGMLPIAL
GDATKTVPYVMDGRKIYEFTVTWGEERSTDDLEGEVTQSSDKRPAKSDIEALLPNYTGTI
SQIPPQFSAIKIAGERAYDLARDGETVEIPSREVEVHRLTLLNCEGDKAHFEVECGKGTY
VRSLARDFGRDLGCYGHISSLRRTFVAPFAEETMVPLAELVALEAIEDRDERLAALDAFL
GDTAEALSALPQLRITDDQAHRLRMGNPIILRGRDAPVAEPEAVALAGGKLIAIGEIAGG
EFHPRRVFA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccaagaaagcccaagggccgcccgatttcgggctggctcattctcgacaag
ccggtggatttcggctcgaccgaggccgtcggcaagatcaagtggctgttcaacgcccag
aaggccggtcatgctggcacgctcgatccgctcgcatccggcatgctgccgattgcactc
ggcgatgcgaccaagaccgtcccttatgtcatggacggccgcaaaatctacgaattcacg
gtgacctggggcgaggagcgctcgacggacgatcttgagggcgaggtaacgcagagctcc
gacaagcgccccgccaagagtgacatcgaggcgttgctgcccaactacaccggcaccatc
agccagatcccgccgcagttctcggcgatcaagattgccggcgagcgcgcctatgatctc
gcccgcgatggcgagacggtcgagattccctctcgcgaagtcgaagttcaccgcctgacg
ctcctgaactgcgaaggcgacaaggcgcatttcgaggttgaatgcggcaaaggcacttac
gtgcgctcgctggcccgcgacttcggtcgcgatctcggctgctacggccatatctcctcg
ctccgccgcaccttcgtggccccgtttgccgaggagacgatggtgccgctcgcggagctc
gtggcgctcgaagccatcgaggaccgggacgagcggctggccgctctcgacgccttcctc
ggtgacacggccgaagcactgtccgccttgccacaactcaggatcaccgatgaccaggcg
catcggcttcgcatgggcaatcccatcatcctgcgcggccgtgatgcaccggttgcagag
cctgaggccgtcgcattggccggcggcaagttgatcgccatcggcgagatcgcaggcggc
gagtttcacccgcggcgcgtcttcgcctga
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