Rhizobium rosettiformans: D4A92_07315
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Entry
D4A92_07315 CDS
T08393
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03030
DNA replication
rros03410
Base excision repair
rros03420
Nucleotide excision repair
rros03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
D4A92_07315 (polA)
03410 Base excision repair
D4A92_07315 (polA)
03420 Nucleotide excision repair
D4A92_07315 (polA)
03440 Homologous recombination
D4A92_07315 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rros03032
]
D4A92_07315 (polA)
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_07315 (polA)
Enzymes [BR:
rros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
D4A92_07315 (polA)
DNA replication proteins [BR:
rros03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
D4A92_07315 (polA)
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
D4A92_07315 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D4A92_07315 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QRF51259
LinkDB
All DBs
Position
1553322..1556306
Genome browser
AA seq
994 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPALNRKSDGLPVNAVSGFCNMLWKLLRDARNTDVGVT
PTHLAVIFDYSSTTFRKEIYPLYKANRSAPPEDLIPQFGLIRHATRAFNLPCIETEGFEA
DDIIATYARQAEAVGADVTIVSSDKDLMQLLTPNVHMYDAMKDKQIGIPDVIEKWGVAPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEFGDLETLLARAGEIKQIKRRENIIANA
ELARVSRQLVELRTDVPLDMKLEDLVLEPQDGPKLIGFLKAMEFTTLTRRVAEVCDCDAG
AIDAAVVPVEWGDAARGPDLDAGDVSTSSDTATSALSAASSSAPAASPDGKTPADLAASR
ANAFAGKPIDRSAYVTIRDIETLELWIAAARETGLVAFDTETTSLDPMQAELVGVSLAIQ
DNVLSPGSTDIRAAYIPLTHKTGVGDLLGGGHAEGQIPMKEALAALKGLLEDPSVLKVAQ
NLKYDYLVMKRHGVTLQSFDDTMLMSYVLDAGKGNHGMDGLSEKWLGHTPIPYKDVAGSG
KSSVTFDLVDIDRATAYAAEDADVTLRLWLVLKPRLAAEGLTRIYERLERPLVPVLAHME
ERGITVDRQILSRLSGELAQKAAATEDEVYELAGERFNIGSPKQLGDILFGRMGLPGGSK
TKTGQWSTSAQVLEDLAAEGAPLPRKIVDWRQLTKLKSTYTDALPGYIHPQTKRVHTGYS
LASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRVLAHVAEI
PQLRQAFADGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGLANQLSIE
RSEAGEYIKKYFERFPGIKDYMESTKAFAREHGYVETIFGRRAHYPEIKSSNPSMRAFNE
RAAINAPIQGSAADVIRRAMIQIEPALVAAGLSERCRMLLQVHDELIFEVEDEAVDAAMP
VIVDIMENAAMPAVSMRVPLKVDARAAHNWDEAH
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgtcgacggctcgggtttcatcttccgcgccttc
cacgccatcccggccctcaaccgcaagtcggacggtctgcccgtcaacgcggtctcgggc
ttctgcaacatgctgtggaagctcctgcgcgacgcccgtaacaccgatgtcggggtgacg
ccgacccatctggccgtgatcttcgactactcctcgacgacattccgcaaggaaatctac
ccgctctacaaggcaaaccgttcggccccgccggaagatcttatcccgcaattcggcctg
atccgccatgcgacccgcgccttcaacctgccctgcatcgagaccgaaggcttcgaggcc
gacgacatcatcgccacctatgcccgccaggcagaggccgtcggcgccgatgtcaccatc
gtctcctccgacaaggacctgatgcagctcctgaccccgaacgtgcatatgtacgacgcg
atgaaggacaagcagatcggcattcccgatgtcatcgagaaatggggtgtagccccggaa
aagatgatcgatctgcaggcgatgaccggcgattcgaccgacaacgtgcctggcatcccc
ggcatcggtccgaagaccgccgcccagttgctggaagaattcggcgatctcgaaacgctg
ctcgcccgcgccggtgagatcaagcagatcaagcgccgcgaaaacatcattgccaatgcc
gagctcgcccgggtctcccgccagctggtcgaactgcgcaccgacgtgccgctcgacatg
aagctggaggacctggttctggagccgcaggacggaccaaagctgatcggcttcctcaag
gctatggaattcaccacattgacgcggcgcgtcgcggaggtctgcgattgtgatgcgggt
gccatcgacgccgctgttgttcccgtcgaatggggtgacgccgcccgcggtcccgatctc
gacgccggcgacgtttccacctcatctgacactgcgacctcggcgctatcagccgcatcg
tcttcagctccggcagcaagccccgacggcaagacacccgccgatctcgcagcaagccgg
gccaatgcattcgccggcaagccgatcgacagaagcgcatacgtgacgatccgcgacatc
gagaccctcgagctctggatcgccgctgcccgcgaaaccggcctcgtcgccttcgacacc
gagacgacctcgctcgatccgatgcaggccgaactcgtcggcgtctcgctcgccatccag
gacaacgtcctgtcgccgggctcgaccgacatccgcgcggcctacattccgctcacgcac
aagaccggtgtcggcgatctcctcggcggcggtcatgccgagggccagatcccgatgaag
gaggcgctcgcggcattgaaggggctgctcgaagacccctccgtgctcaaggtcgcgcag
aacctgaaatacgattacctggtgatgaagcgccacggcgtgacgctccagtccttcgac
gacaccatgctgatgtcctacgtgctcgacgccggcaagggcaatcacggcatggacggc
ctgtcggagaagtggctcggccacacgccgatcccctacaaggacgtcgccggctcgggc
aaatcctccgtgactttcgatctcgtcgatatcgatcgcgccacggcctatgccgctgaa
gatgcggacgtaacgcttcgcctatggctggtgctgaaacctcgcctggccgccgaaggc
ctcacccgcatctacgagcgcctggaacgtccgctcgtccccgtgctcgcccatatggaa
gagcgcggcatcaccgtcgaccgccagatcctctcgcgtctgtcaggcgaacttgcccag
aaggctgccgccaccgaggacgaggtttatgaactcgccggcgagcgcttcaacatcggc
tcgccgaaacagctcggcgatatcctgtttggccgcatgggcctgcccggtggttccaag
accaagaccggtcagtggtcgacctcggcccaggtgctcgaagacctcgccgccgagggc
gccccgctgccgcgcaagatcgtcgactggcgccagctgaccaagctgaagtcaacctat
accgacgcgcttcccggatacatccatccgcagaccaagcgcgtccacaccggctattcg
ctcgcatcgacgacaacggggcgcctttcatcctcagaaccgaacctgcagaacatcccg
gtccgcaccgccgagggccgcaagatccgcacggccttcatctcgacgccgggccacaag
ctgctctcggctgactacagccagatcgaactgcgcgtgctggcccatgtcgcggagatc
ccgcagctgcgtcaggcctttgccgatggcatcgacatccatgccatgaccgcatccgaa
atgttcggtgtgccggtcgagggcatgccgtcggaagtccgtcgccgcgccaaggcgatc
aacttcgggatcatctacggcatctcggccttcggacttgccaaccagctgagcatcgag
cgctcggaagcgggggagtacatcaagaagtatttcgagcgcttccccggcatcaaggac
tacatggagagcaccaaggccttcgcccgcgagcatggctatgtggaaaccatcttcggc
cgccgcgcccattacccggagatcaagtcctccaacccctcgatgcgcgccttcaacgaa
cgcgccgccatcaacgccccgatccagggctcggctgccgacgtcatccgccgcgccatg
atccagatcgaacccgcactcgtggctgccggcctgtcggaacgctgccgcatgctgctg
caggtgcatgacgaactgatcttcgaggtcgaggacgaggcggtcgatgccgccatgccc
gtcatcgtcgacatcatggaaaatgcggccatgccggccgtctccatgcgcgtgccgctg
aaggtcgacgcccgcgccgcccacaattgggacgaggcgcactga
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