Rhizobium rosettiformans: D4A92_08540
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Entry
D4A92_08540 CDS
T08393
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
rros
Rhizobium rosettiformans
Pathway
rros02020
Two-component system
rros02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
D4A92_08540 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
D4A92_08540 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rros03021
]
D4A92_08540 (rpoN)
Transcription machinery [BR:
rros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
D4A92_08540 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
QRF51481
UniProt:
A0ABX7EVS3
LinkDB
All DBs
Position
complement(1793117..1794685)
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AA seq
522 aa
AA seq
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MALSANLFLRQSQALVMTPQLMQSIQLLQMTHLELMQFIAQEVERNPLLEMAADDGDLGG
DLPDNADRHGNTAQESQAASDETGASPSLDSDWYENGASERLNDRLDTNYDTAFADEGSL
QRPDAPELLGQWKSMPGQSGDGSEGYDLDDFVAGQVSLRDHLNQQVPFALTSASDQLLAS
VLIDHLDEAGYLRADLDEVASRLGLSHANVEAVLVTLQTLEPAGVFARSLSECLAIQLRQ
RDRYDPAMAGLVNNLELLAKRDFAALKKICGVDEEDLVDMLSEIRKLNPKPGSSFEHAVS
ESVTPDIVVRPDGLGGWQVELNPDALPRVLVNHTYMAAVGRQGASKEAPDQAFMSECLQN
ANWLTRSLDQRARTITKVAAEIVRQQSAFLEQGVDHLRPLNLKTVADAIKMHESTVSRVT
TNKYMLTPRGLFELKYFFSVSIASAEGGDSHSAEAVRHRIRALIEKESPEAVLSDDDIVD
QLKSSGVDLARRTVAKYRESMNIPSSVQRRREKRAMAKVSAG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggccttatccgccaatctgttcctgcgacaaagccaggccctggtgatgactccccag
ctgatgcagtcgattcagctgttgcagatgactcacctcgaactgatgcagttcatcgcg
caggaagtggagcggaatccgctgctcgaaatggcggcagatgacggcgatttgggcggc
gacctgcctgacaatgccgatcgccacggcaacacggcccaggaaagccaggccgcctcc
gacgaaacaggcgcttctccatcgctcgacagcgactggtatgagaatggcgcgagcgag
cgcctgaacgaccgactcgatacgaattacgataccgccttcgcggacgaaggctccctg
caacggcccgatgcgccggaactgcttgggcaatggaaatcaatgccgggtcagtccggc
gacggaagcgagggctatgaccttgacgacttcgttgccgggcaggtcagcctccgggat
cacctgaaccagcaagttccctttgcgctcacgtcggcctccgatcagttgctcgcctcc
gtgctgatcgaccatctcgatgaagcaggctatctgcgcgcggacctcgacgaggtggcg
tctcgcctcggcctgagccatgcgaatgtcgaggcggttctcgtgaccctgcaaacgctc
gagcccgccggggtctttgcgcgcagcctcagcgaatgcctggcgatccaattgcgtcaa
cgtgaccggtatgacccggcgatggcaggcctcgtcaacaatctcgaactgcttgccaag
cgcgattttgccgcgttgaagaagatctgcggcgtggacgaggaagacctcgtcgacatg
ctgtcggagatccgcaagctcaatccaaagccgggcagcagctttgagcatgcggtcagc
gaatccgtgacgcctgacatcgtcgtgcgtcccgacgggctcggaggctggcaggtcgaa
ctcaatccggatgcgcttccccgcgtgctcgtcaaccatacctacatggccgccgttggg
cgccaaggggcatccaaggaggctcccgaccaggccttcatgtcggaatgtctgcagaat
gccaactggctcacgcgcagcctcgaccagcgcgcccgcacgatcaccaaggtcgcagcc
gagatcgtgcgccagcagtccgccttcctcgagcaaggcgtcgatcatcttcggccgctg
aatctgaaaacggtcgccgatgccatcaagatgcacgaatcgaccgtcagtcgcgtgacg
acgaataaatacatgctcacgccccgcgggctgttcgaactcaaatacttcttcagcgtg
tcgatcgcctcggcggaaggcggcgacagccattcggcggaagccgtacgccatcgcatt
cgcgccctgatcgaaaaggaaagccccgaagccgtgctgtccgacgacgatattgtcgat
cagctgaaatcatcgggcgtcgacctcgcacggcgcaccgtggccaaatatcgcgagtcg
atgaatatcccttcttccgtccagaggcgtcgcgaaaagcgcgccatggccaaggtttca
gccggctga
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