KEGG   Rhizobium rosettiformans: D4A92_09150
Entry
D4A92_09150       CDS       T08393                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rros  Rhizobium rosettiformans
Brite
KEGG Orthology (KO) [BR:rros00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rros03400]
    D4A92_09150
Enzymes [BR:rros01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     D4A92_09150
    5.6.2.6  RNA 3'-5' helicase
     D4A92_09150
DNA repair and recombination proteins [BR:rros03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    D4A92_09150
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 PSD4
Other DBs
NCBI-ProteinID: QRF51589
LinkDB
Position
1911912..1914431
AA seq 839 aa
MKTADSALALLPAPFLRWFGEKGWQPRDHQLELLARARSGENGGESLLLIAPTGAGKTLA
GFLPSLTELTERGRKKPGEAFTGIHTLYISPLKALAVDIERNLMKPVTEMGLPITIENRT
GDTPAHKRQRQKTNPPDILLTTPEQVALLISHSDAARFFKDLRYVIFDELHSLVTSKRGH
LLSLGLTRLRKLSPGLKTIGLSATVAQPMDLRRWLVAQPDKGEAAAGLITVDGGARPNIT
ILQTEDRIPWSGHKAHYAIPEVYKVLNDFQTTLLFVNTRSQAEMLFQELWTVNDDNLPIA
LHHGSLDVSQRRKVEAAMAENRLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRI
GRANHRMDEPSRAILVPANRFEVMECQAALDANYIGAQDTPPVGEGSLDVLAQHVLGMAC
ADAFDEEELYREVTTALPYAALPRETFARIVDFVATGGYALRTYERYARIRRRKDGLWRV
SNPQVAQQYRLNLGTIVEMPMLNVRLVKRNHLGSIGRGGMTLGKVEEYFFEQLTQGDTFL
FSGKVLRFEGIRDNECLVSNAFSMDPKIPAYAGGKFPLSTYLAEQVRAMLDDPARRTGLP
DQVRDWLSLQAEKSVLPKRGDLLIETFPRGERFYMVIYAFEGRLAHQTLGMLLTRRLERM
RAKPLGFVATDYALAIWALEDMGSLIARGALSLAELFDQDMLGDDLETWLDESFMLKRTF
RNCAVIAGLIEQRHPGKEKSGRQVTVSSDLIYDVLRSHEPDHILMQATRQDAAAGLLDIA
RLADMLERIKGHILHKRLTQISPLAVPVMLEIGKEPVAGEAQEHVLSMAAEDLIAEAMA
NT seq 2520 nt   +upstreamnt  +downstreamnt
gtgaagacagctgattccgcccttgcccttctgcctgcccccttcctccgctggttcggc
gaaaagggctggcagccgcgtgaccatcagctggaactgctggcccgggcgagatccggc
gagaatggcggcgagagcctgctgctgatcgccccgaccggtgcgggcaagacgcttgct
ggctttctgccgtcgctgacggaactgaccgagcgtggccgcaagaagccgggcgaggcc
ttcaccgggatccacacgctctacatctcgccgctcaaggcgctcgccgtcgatatcgag
cgaaacctgatgaagcccgtcaccgagatggggctcccgatcaccatcgagaaccgcacc
ggcgatactccggctcacaagcgtcagcggcagaagaccaatccgccggatatcctcctg
acgacgccagagcaggtggcgctgctcatctcccactcggacgcggcgcgcttcttcaag
gacctgcgctacgtcatcttcgacgaactgcattcgctggtgacctcgaagcgcggccat
ctgctgtcgcttggtctcacgcggctgaggaaactctcccctggtctcaagaccattggc
ctttctgcgactgtcgcccagccgatggatctgcgacgctggcttgtggcgcagccggat
aagggcgaggcggcggccggtctgatcacggtcgatggcggtgcgcgaccgaacatcacc
atcctgcagacggaggatcgcattccctggtcagggcacaaggcacactatgccatcccc
gaggtctacaaggtcctcaacgactttcagacgacgctgcttttcgtcaacacgcgctcc
caagcggaaatgctcttccaggaactctggacggtcaatgacgacaacctgccgatagcc
ctgcaccacggctcgctcgacgtctcccagcgccgcaaggtggaggccgccatggccgaa
aaccggctgcgcgcggtcgtcgcgacctcgaccctcgacctcggcatcgactggggtgac
gtcgatctcgtcatccatgtcggtgcgcccaagggcgcatcgcgccttgcccagcgcata
ggtcgcgccaatcaccgcatggacgagccgtcccgcgccattctcgtgccggccaaccgc
tttgaggtgatggagtgtcaggcggcactcgatgccaactatatcggtgcccaggacacc
ccgccggtcggcgagggttcactcgacgtgctggcccagcatgtgctcggcatggcctgc
gccgatgccttcgatgaggaggagctctaccgcgaggtgacgacggcgcttccctatgca
gcgctgccacgcgagaccttcgcccgcatcgtcgatttcgtcgcgaccggcggctatgcg
cttcggacctacgagcgctacgcccgcattcgccgccgcaaggacggcttatggcgcgtg
tccaatccgcaggtcgcccagcagtatcgcctcaacctcggcaccatcgtcgagatgccg
atgctcaatgtccggctggtcaagcgcaaccatctgggctcgatcggtcgcggcggcatg
acgctcggcaaggtcgaggaatatttcttcgaacaactgacccagggcgataccttcctc
ttctcgggcaaggtgctgcgcttcgaaggcatcagagacaacgaatgcctcgtctccaac
gccttttcgatggatccgaaaatcccggcctatgccggcggcaagttcccgctctcgacc
tatctcgccgaacaagttcgtgccatgctcgacgatcccgcccgccggaccggtctgccg
gatcaggtgcgcgactggctgtcgctgcaggcggagaagtctgttctgcccaagcgcggt
gatctcctgatcgagaccttcccgcgcggcgagcgcttctacatggtcatctatgccttc
gagggaaggctggcgcatcagacgctcggcatgctgctcacccgtcggctggagcgcatg
cgcgccaagccgctgggcttcgtggcgaccgactatgcgctcgcgatctgggccttggag
gacatgggctcgctgatcgcgcggggagcactcagcctcgcagaactcttcgaccaggac
atgctgggagacgatctcgaaacctggctcgacgagagcttcatgctgaagcgcaccttc
cgcaattgcgcggtgatcgccggcctgatcgagcagcgccatccgggcaaggaaaagtcc
gggcgccaagtgactgtgtcctcggacctgatctacgacgtgctgcgcagccacgagccc
gatcatatcctcatgcaggcaacgcgacaggatgccgccgccggacttttggacattgcc
cgccttgccgatatgctggagcgaatcaaggggcacatcctgcacaagcgcctgacgcag
atctcgccgctcgccgtgccggtcatgctggagatcggcaaggagccggtagcgggcgaa
gcccaggagcatgtgctgtccatggcggcggaagatctgatcgccgaagccatggcatga

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