Rhizobium rosettiformans: D4A92_15815
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Entry
D4A92_15815 CDS
T08393
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rros
Rhizobium rosettiformans
Pathway
rros03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
D4A92_15815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rros03021
]
D4A92_15815
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_15815
Enzymes [BR:
rros01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
D4A92_15815
Transcription machinery [BR:
rros03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
D4A92_15815
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
D4A92_15815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
IDH
Motif
Other DBs
NCBI-ProteinID:
QRF52797
LinkDB
All DBs
Position
3230925..3231935
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSGRTKATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPNHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLLMTIETDGSVTGEDAVAFAARILQDQLGVFVNFDEPQKEAEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaattggcaggaactgatcaagccgaacaaggtggaattttcctcctcc
ggccgcaccaaggcgaccctcgtcgccgagccgcttgagcgtggcttcggcctgacgctc
ggcaacgctctgcgtcgcgttctcctgtcgtcgcttcgtggtgcagccgtcacggctgtc
cagatcgacggcgttctgcacgagttctcgtctatcccgggcgttcgcgaagatgtcacc
gacatcgtcctgaacatcaaggaaatcgccatcaagatggacggcgacgatgccaagcgc
atggttgtccgcaagcagggtccgggcgttgttaccgccggtgacatccagacggtcggc
gacattgagatcctgaaccccaaccacgtgatctgcaccctcgacgaaggtgctgaaatc
cgcatggagttcacggtcaacaacggcaagggctatgttcctgccgagcgcaaccgcgcg
gaagatgcaccgatcggtctcatcccggtcgacagcctctattcgccggtcaagaaggtg
tcctacaaggtggaaaacacccgcgaaggacaggttctcgactatgacaagctgctgatg
accatcgaaaccgatggttcggtcaccggggaagatgcagtcgctttcgcggctcgtatt
ctccaggaccagctcggcgtcttcgtcaacttcgacgagccgcagaaggaagccgaagaa
gaagccgtcaccgagcttgccttcaacccggcgctgctcaagaaggtcgacgagctggag
ctttcggtccgctcggcaaactgcctgaagaacgacaacatcgtttacatcggcgatctg
atccagaagaccgaggcagagatgctgcgcacgccgaacttcggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggtatggaagtaccggcatgg
ccgcctgagaacatcgaagatctcgccaagcgctacgaagaccagtactga
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