Rhizobium rosettiformans: D4A92_17425
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Entry
D4A92_17425 CDS
T08393
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
rros
Rhizobium rosettiformans
Pathway
rros03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
D4A92_17425 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rros03400
]
D4A92_17425 (uvrA)
DNA repair and recombination proteins [BR:
rros03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
D4A92_17425 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
D4A92_17425 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
BCA_ABC_TP_C
DnaJ_CXXCXGXG
AAA_29
AAA_25
AAA_21
nSTAND1
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QRF53091
UniProt:
A0ABX7F172
LinkDB
All DBs
Position
3548389..3551310
Genome browser
AA seq
973 aa
AA seq
DB search
MSELKTISIRGAREHNLKGVDLDLPRNSLIVMTGLSGSGKSSLAFDTIYAEGQRRYVESL
SAYARQFLEMMQKPDVDQIEGLSPAISIEQKTTSRNPRSTVGTVTEIYDYMRLLFARVGV
PYSPATGLPIESQTVSQMVDRILAYEEGTRLYILAPMIRGRKGEYKKELAELMKKGFQRV
KIDGQFYEIAEAPTLDKKYKHDIDVVVDRVVVRPDIASRLADSLETCLRLADGLAVAEFA
DKPLPPEETSAGGSANKSLNETHERVLFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPT
CDGLGSQQKIDEALIVPEVHRKLSDGAIAPWAKSSSPYYNQTLEALGKAFGFKLTSKWSD
LSEAAQKAILHGTEEKIDFHYADGARSYTTTKTFEGIVPNLERRWKETDSAWAREEIERF
MSAAPCPACNGFRLKPEALAVKINGLHIGQVTEMAIRNAGSWFEDLPAKLTDKQNEIAVR
ILKEIRERLRFLNDVGLDYLSMSRNSGTLSGGESQRIRLASQIGSGLTGVLYVLDEPSIG
LHQRDNARLLDTLKHLRDIGNTVIVVEHDEDAILTADYVVDIGPAAGIHGGQVIAQGSPQ
DVMANPKSLTGKYLTGEMGVSVPAQRRKPKKGQQIKVVGAKGNNLKNVTAAIPLGVFTAV
TGVSGGGKSTFLIETLYKAAARRVMGARENPAEHERIDGFEFIDKVIDIDQSPIGRTPRS
NPATYTGAFTPIRDWFTGLPEAKARGYQAGRFSFNVKGGRCEACQGDGVIKIEMHFLPDV
YVTCDVCHGKRYNRETLDVTFKGKSIADVLDMTVEEGVEFFQAVPAVRDKLQALFDVGLG
YIKVGQQANTLSGGEAQRVKLAKELSKRSTGRTLYILDEPTTGLHFHDVAKLLEMLQELV
NQGNSVVVIEHNLEVIKTADYIIDFGPEGGDGGGQIVAQGTPEEVVKVEASYTGQFLKEL
LERRPMKKVQAAE
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactcaagaccatttccatccgtggtgcgcgcgagcacaatctgaagggcgtc
gacctcgatctgccgcgcaacagcctgatcgtgatgaccgggctgtccggctcaggcaag
tcgtcgctcgccttcgacacgatctatgcagagggccagcggcgttacgtcgagagcctc
tcggcctatgcccgtcagttcctcgagatgatgcaaaagcccgacgtcgaccagatcgag
gggctgtcgccggcgatctcgattgagcagaagacgacctcgcgcaatccgcgctcgacg
gtcggcacggtcaccgaaatctatgactatatgcgcctgctctttgcccgcgtcggcgtg
ccctattcgcctgcaaccggccttccgatcgagagccagaccgttagtcagatggtcgac
cggatcctcgcctatgaggaaggcacccgcctctacatcctcgccccgatgatccgcggg
cgaaaaggcgaatacaaaaaagaactcgccgagttgatgaagaagggcttccagcgcgtc
aagatcgacgggcagttctacgagatcgccgaggcgccgacgctcgacaagaaatacaag
cacgacatcgacgtagtggtcgaccgtgtcgtggtgcgccctgacatcgccagccgcctg
gctgacagtctggaaacctgcctcaggctcgccgacgggttggcggtcgccgagtttgca
gacaagccgctgccaccggaggaaacgtcggccggcggttcggccaacaagtcgctgaac
gaaacgcacgaacgcgtcctgttctccgagaaatttgcctgccccgtttccggctttacc
attccggaaatcgagccgcgtctcttctccttcaacaatcccttcggcgcctgcccgacc
tgcgacggtctcgggtcgcagcagaagatcgatgaggcgctgatcgttcccgaagtgcat
cgcaagctgagcgacggggcgatcgcgccctgggccaaatccagctcgccctattacaac
cagaccttggaagcgctgggcaaggccttcggcttcaagctgacctcgaaatggtctgac
ctgtcggaagcagcgcagaaggcgatcctgcacggcacggaagagaagatcgacttccat
tatgccgacggcgcacggtcctacacgacgacgaagaccttcgaaggcatcgtgccgaac
ctcgagcggcgctggaaggagaccgacagcgcctgggcgcgcgaggagatcgagcgtttc
atgtcggccgccccctgcccggcctgcaacggcttccgcctgaagccggaggcactcgcc
gtcaagatcaatggcttgcatatcggccaggtaaccgagatggcgatccgcaatgccggc
tcgtggttcgaggacctcccggccaagctgaccgacaagcagaacgagatcgccgtacgt
atcctgaaagagatccgcgagcgcctgcgcttcctcaacgacgtcggcctcgactatctc
tcgatgtcgcgcaattccggcacgctgtcaggcggcgaaagccagcgcattcgtctggca
tcgcagatcggctccggcctgacgggtgtcctctatgtgctggacgagccatcgatcggc
ctccatcagcgtgacaatgcgcgactgctcgacacgctgaagcacctgcgcgacatcggc
aacaccgtgatcgtcgtcgagcatgacgaggatgcgatcctgaccgccgattatgtcgtc
gatatcggcccggcagccggcattcatggcgggcaggtgatcgctcagggctcgccgcag
gacgtgatggccaatccgaaatcgctgactggcaagtacctcaccggcgaaatgggtgtg
agcgtcccagcccagcggcgcaagccgaaaaaggggcagcagatcaaggtcgtcggcgcc
aaaggcaacaacctgaaaaacgtcacggcggcgatcccgctcggcgtgttcacggcagtc
actggcgtatccggtggtggcaagtcgaccttcctgatcgagacgctctacaaggcagcg
gcccgtcgcgtcatgggtgcgcgcgaaaatccggctgagcacgagcgcatcgacggcttc
gagttcatcgacaaggtcatcgacatcgaccagtcaccgatcgggcgcacgccgaggtcg
aacccggccacctatacgggcgccttcacgccgatccgcgactggttcaccgggcttccg
gaagccaaggcacgcggctatcaggccgggcgcttctcgttcaacgtcaagggtggccgc
tgcgaggcctgccagggcgatggcgtgatcaagatcgagatgcacttcctgccggacgtc
tatgtcacttgcgatgtctgccacggcaagcgctacaaccgcgagacgcttgacgtcacc
ttcaagggcaagtcgatcgccgacgtgctggatatgacggtcgaggaaggtgtcgagttc
ttccaggcggtgccggcggtgcgcgacaagctgcaggcgctgttcgatgttggcctcggc
tacatcaaggtcggccagcaggcgaacacgctgtccggcggcgaggcgcaacgcgtcaag
ctcgccaaggagctgtcgaagcgctcgaccggccgcacgctctacattctcgacgagccg
accaccggcctgcatttccacgacgtcgccaagctattggagatgctgcaggaactggtg
aaccagggcaacagtgtcgtggtcatcgagcacaatctcgaggtcatcaagacggccgac
tatatcatcgacttcggcccggaaggcggcgatggcggcggccagatcgtcgcccagggc
acgcccgaagaggtggtgaaggtcgaggcgtcctatacggggcagttcctcaaggagctg
ctggagcggcgcccgatgaagaaggtgcaggcggcggagtaa
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integrated database retrieval system