Rhizobium rosettiformans: D4A92_18610
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Entry
D4A92_18610 CDS
T08393
Name
(GenBank) peptidoglycan-binding protein
KO
K21470
L,D-transpeptidase YcbB
Organism
rros
Rhizobium rosettiformans
Brite
KEGG Orthology (KO) [BR:
rros00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rros01002
]
D4A92_18610
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rros01011
]
D4A92_18610
Peptidases and inhibitors [BR:
rros01002
]
Cysteine peptidases
Family C82
D4A92_18610
Peptidoglycan biosynthesis and degradation proteins [BR:
rros01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
D4A92_18610
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
Pil1
Ddi2_HDD
Motif
Other DBs
NCBI-ProteinID:
QRF53312
UniProt:
A0ABX7F0U6
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All DBs
Position
complement(3799724..3801595)
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AA seq
623 aa
AA seq
DB search
MTRNRKFVVTALLAATTAVGTLPGDAAATTLLDLLRGGPGRQAKQQAAPASLESQARGGL
EMGDPEPLPKVAGPRYYTYKPEAQRAIKIKLPVTDAAAGSTEAPSAEVLGARRFLSDVSV
RATDEVAKTVEGYYGDPNKPLIWTSEDGISERGRAMISALAGADTVGLSPDDYLVAMPTE
NADPADPEKRQRELMAFEVALSAKVLTYVQDTVRGRIDPNKISGYYDFKRKGVNIAPVLD
MLRKSPDVAAYLRNRDPKSPQFVALRDELMRLKAEDAEAETQAITIAPGTLLKPGQSKPE
TAQVIGALKQVASEAVLTQHSATLTAYTGTPDYTPELVAVVEQFQEEKGLKPDGVVGPAT
IRAMTGHSNAEKIAKLEVAMEALRWLPADLGSRYVFINAPAFEATYVNDGKEQFSMRVVV
GSKANQTYFFQDQIQTVEFNPYWGVPKSIIVNEMLPKLRADPSYLDRLGYEVSYGGRKVA
SSQVNWNATHAVDVRQPPGGDNALGELKILFPNEHAIYMHDTPSKSYFNRDMRALSHGCV
RLAEPRVMAAAVMGTTVEEIGKQIASGQNRAVQVPQKLPVYVSYFTAWPNKDGVIEYFDD
VYSRDDHTAKAFKATTDARAPRV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaaacaggaaattcgtagtcaccgcgctcctcgctgcgacgactgcggtcgga
actcttccgggcgatgctgccgccacgacgcttctcgatcttctccggggcggaccagga
cgccaggcaaaacagcaggcggctcccgcctctctcgaaagtcaggcacgcggtgggctc
gaaatgggcgatcccgagccactgccgaaagtcgccggccctcggtactatacctacaag
cccgaggcgcagcgcgcgatcaagatcaagctgccggtgacggacgccgcggccggatcg
accgaagcgccgtctgcggaggtgcttggcgcccgccgttttctgtccgacgtttccgtg
cgggccacggacgaggtcgccaagaccgtcgagggctattacggcgatcccaacaagccg
ctgatctggaccagcgaggatggcatttccgagcgtggtcgcgccatgatctcggcgctc
gcaggcgccgatacggtcggtctgtcgccagacgactatctcgtggcgatgccgaccgag
aacgctgacccggcggatccggaaaagcgtcagcgcgaactcatggccttcgaggttgct
ctctccgctaaggtcctcacttacgtgcaggacacggttcgcggccgtatcgatccgaat
aagatctccggctactatgacttcaaacgcaagggcgtgaatattgcccccgtgctcgac
atgctgcggaagagccctgatgttgcggcctatctgcgtaaccgcgatccaaagagcccg
caattcgtggcgctgcgcgacgagcttatgcggctgaaggcagaggatgccgaagctgaa
acgcaggcgatcacgattgcgcccggcacactgctgaagcctggacagagcaagccggag
acggctcaggtcatcggtgccctgaagcaggtggcgtcggaagcggtgctcacgcagcat
tcggcgacgctgaccgcctataccggcacgccggactacacgcctgaactcgtcgctgtg
gtcgaacagttccaggaagaaaagggcctgaagccggatggcgtcgtcggtcctgcaaca
atccgtgcgatgaccggtcatagcaatgccgagaagattgccaagctcgaagtcgccatg
gaggccctgcgctggctgccggccgatctcggttcgcgttatgtcttcatcaacgcaccg
gcctttgaggcgacctacgtcaacgacggcaaggagcagttctcgatgcgggtggtcgtc
ggctccaaggcgaaccagacctacttcttccaggatcagatccagaccgtcgagttcaac
ccgtattggggcgtgccgaagtcgatcatcgtcaacgaaatgctgccgaagctcagggcc
gatccgtcctatctcgatcgcctcggctacgaggtttcctatggcggtcgcaaggtggcc
tcgagccaggtcaactggaatgccactcatgccgtcgacgttcgccagccgcccggcggc
gacaacgcgctgggcgagttgaagatcctcttccccaacgaacatgcgatctacatgcat
gacacgccgtcgaagagctactttaacagggatatgcgcgcgctgagccatggttgcgtg
cgtctggccgagccgcgcgtaatggcggccgccgtcatgggcacgacggtcgaggagatt
ggcaagcagatcgcatcgggccagaaccgcgccgtgcaggttccgcagaagctcccggtt
tacgtctcttactttacggcctggccgaacaaggatggcgtgatcgaatatttcgatgat
gtctacagccgcgatgaccatacggccaaggcgttcaaggcgacgaccgatgcacgggcg
ccgcgggtctaa
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